RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 TEX15Q9BXT5 2789 aa4.72□□□□□ -1.65
CDH12-203ENST00000517378 PF4P02776 101 aa4.72□□□□□ -1.65
CDH12-203ENST00000517378 PRIMA1Q86XR5 153 aa4.72□□□□□ -1.65
CDH12-203ENST00000517378 GAGE12JA6NER3 117 aa4.71□□□□□ -1.66
CDH12-203ENST00000517378 PRB1P04280 392 aa4.71□□□□□ -1.66
CDH12-203ENST00000517378 GAGE4Q13068 117 aa4.71□□□□□ -1.66
CDH12-203ENST00000517378 GAGE5Q13069 117 aa4.71□□□□□ -1.66
CDH12-203ENST00000517378 C15orf53Q8NAA6 179 aa4.71□□□□□ -1.66
CDH12-203ENST00000517378 C16orf95Q9H693 158 aa4.71□□□□□ -1.66
CDH12-203ENST00000517378 NOP10Q9NPE3 64 aaKnown RBP4.71□□□□□ -1.66
CDH12-203ENST00000517378 C19orf73Q9NVV2 129 aa4.71□□□□□ -1.66
CDH12-203ENST00000517378 NAV2Q8IVL1 2488 aa4.71□□□□□ -1.66
CDH12-203ENST00000517378 CCDC168Q8NDH2 2452 aa4.71□□□□□ -1.66
CDH12-203ENST00000517378 MXRA5Q9NR99 2828 aa4.71□□□□□ -1.66
CDH12-203ENST00000517378 TRBV7-7A0A0K0K1E9 115 aa4.71□□□□□ -1.66
CDH12-203ENST00000517378 ACYP1P07311 99 aa4.71□□□□□ -1.66
CDH12-203ENST00000517378 HIST2H2BDQ6DRA6 164 aa4.71□□□□□ -1.66
CDH12-203ENST00000517378 ZNF843Q8N446 348 aa4.71□□□□□ -1.66
CDH12-203ENST00000517378 CSNK1G2-AS1Q8NCQ2 148 aa4.71□□□□□ -1.66
CDH12-203ENST00000517378 BBC3Q96PG8 261 aaPredicted RBP4.71□□□□□ -1.66
CDH12-203ENST00000517378 UBE2L6O14933 153 aa4.7□□□□□ -1.66
CDH12-203ENST00000517378 MEIG1Q5JSS6 88 aa4.7□□□□□ -1.66
CDH12-203ENST00000517378 SDIM1Q6ZPB5 146 aa4.7□□□□□ -1.66
CDH12-203ENST00000517378 ESM1Q9NQ30 184 aa4.7□□□□□ -1.66
CDH12-203ENST00000517378 TRAV13-2A0A0B4J235 113 aa4.7□□□□□ -1.66
CDH12-203ENST00000517378 IGLV1-51P01701 117 aa4.7□□□□□ -1.66
CDH12-203ENST00000517378 RPL28P46779 137 aaKnown RBP4.7□□□□□ -1.66
CDH12-203ENST00000517378 COX7B2Q8TF08 81 aa4.69□□□□□ -1.66
CDH12-203ENST00000517378 UBR5O95071 2799 aaPredicted RBP4.69□□□□□ -1.66
CDH12-203ENST00000517378 A0A1W2PRX2 142 aa4.69□□□□□ -1.66
CDH12-203ENST00000517378 GAGE6Q13070 117 aa4.69□□□□□ -1.66
CDH12-203ENST00000517378 HIST2H2BCQ6DN03 193 aa4.69□□□□□ -1.66
CDH12-203ENST00000517378 C22orf24Q9Y442 160 aa4.69□□□□□ -1.66
CDH12-203ENST00000517378 TRBV6-8A0A0A6YYG3 113 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 IGHV3OR16-9A0A0B4J2B5 98 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 IMUPQ9GZP8 106 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 TRGV2A0A075B6R0 118 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 LOC100131303A0A0U1RQF7 123 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 GAGE7O76087 117 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 RNASE1P07998 156 aaKnown RBP4.68□□□□□ -1.66
CDH12-203ENST00000517378 GAGE12FP0CL80 117 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 GAGE12GP0CL81 117 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 GAGE12IP0CL82 117 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 TTC32Q5I0X7 151 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 FAM218AQ96MZ4 157 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 BAHCC1Q9P281 2608 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 AKAP9Q99996 3911 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 IGKV2-28A0A075B6P5 120 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 A0A087WZ39 114 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 A0A0U1RRA0 63 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 IGKV2D-28P01615 120 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 FHL2Q14192 279 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 LINC00612Q8N6U2 182 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 LINC01006Q8NI28 216 aa4.68□□□□□ -1.66
CDH12-203ENST00000517378 IBA57-AS1B1ANH7 110 aa4.67□□□□□ -1.66
CDH12-203ENST00000517378 CRPP02741 224 aa4.67□□□□□ -1.66
CDH12-203ENST00000517378 KRTAP1-1Q07627 177 aa4.67□□□□□ -1.66
CDH12-203ENST00000517378 MIR7-3HGQ8N6C7 128 aa4.67□□□□□ -1.66
CDH12-203ENST00000517378 LINC00337Q8N6G1 96 aa4.67□□□□□ -1.66
CDH12-203ENST00000517378 C11orf44Q8N8P7 122 aa4.67□□□□□ -1.66
CDH12-203ENST00000517378 CREBBPQ92793 2442 aa4.67□□□□□ -1.66
CDH12-203ENST00000517378 TEP1Q99973 2627 aaKnown RBP4.67□□□□□ -1.66
CDH12-203ENST00000517378 TLN2Q9Y4G6 2542 aa4.67□□□□□ -1.66
CDH12-203ENST00000517378 IGLV4-60A0A075B6I1 120 aa4.67□□□□□ -1.66
CDH12-203ENST00000517378 WFDC11Q8NEX6 87 aa4.67□□□□□ -1.66
CDH12-203ENST00000517378 WFDC10AQ9H1F0 79 aa4.67□□□□□ -1.66
CDH12-203ENST00000517378 TRGV4A0A0C4DH28 118 aa4.66□□□□□ -1.66
CDH12-203ENST00000517378 BAALC-AS2P0C853 105 aa4.66□□□□□ -1.66
CDH12-203ENST00000517378 KIR2DL5BQ8NHK3 375 aa4.66□□□□□ -1.66
CDH12-203ENST00000517378 SND1-IT1Q9HBX3 110 aa4.66□□□□□ -1.66
CDH12-203ENST00000517378 APCP25054 2843 aa4.66□□□□□ -1.66
CDH12-203ENST00000517378 SMCR5Q8TEV8 140 aa4.66□□□□□ -1.66
CDH12-203ENST00000517378 NIPBLQ6KC79 2804 aaeCLIP4.66□□□□□ -1.66
CDH12-203ENST00000517378 LY6G6DO95868 133 aa4.65□□□□□ -1.66
CDH12-203ENST00000517378 INAFM2P0DMQ5 153 aa4.65□□□□□ -1.66
CDH12-203ENST00000517378 RPL35AP18077 110 aaKnown RBP4.65□□□□□ -1.66
CDH12-203ENST00000517378 LINC00643Q86TS7 51 aa4.65□□□□□ -1.66
CDH12-203ENST00000517378 LINC01561Q8N1V8 128 aa4.65□□□□□ -1.66
CDH12-203ENST00000517378 MAST4O15021 2626 aa4.65□□□□□ -1.66
CDH12-203ENST00000517378 MALP21145 153 aa4.65□□□□□ -1.67
CDH12-203ENST00000517378 CCL18P55774 89 aa4.65□□□□□ -1.67
CDH12-203ENST00000517378 OBSCN-AS1Q96MR7 158 aa4.65□□□□□ -1.67
CDH12-203ENST00000517378 LINC00959A0A1B0GUT2 108 aa4.64□□□□□ -1.67
CDH12-203ENST00000517378 A0A1B0GUV1 79 aa4.64□□□□□ -1.67
CDH12-203ENST00000517378 H0YGX0 51 aa4.64□□□□□ -1.67
CDH12-203ENST00000517378 CCDC179H3BU77 68 aa4.64□□□□□ -1.67
CDH12-203ENST00000517378 SMIM11BQ8TCY0 68 aa4.64□□□□□ -1.67
CDH12-203ENST00000517378 CHCHD5Q9BSY4 110 aa4.64□□□□□ -1.67
CDH12-203ENST00000517378 MTORP42345 2549 aa4.64□□□□□ -1.67
CDH12-203ENST00000517378 CXCL5P42830 114 aa4.64□□□□□ -1.67
CDH12-203ENST00000517378 LINC00158P58513 81 aa4.64□□□□□ -1.67
CDH12-203ENST00000517378 Q8IZM0 81 aa4.64□□□□□ -1.67
CDH12-203ENST00000517378 A0A087WYN8 130 aa4.63□□□□□ -1.67
CDH12-203ENST00000517378 B5MCH6 92 aa4.63□□□□□ -1.67
CDH12-203ENST00000517378 PLA2G2AP14555 144 aa4.63□□□□□ -1.67
CDH12-203ENST00000517378 TOMM7Q9P0U1 55 aa4.63□□□□□ -1.67
CDH12-203ENST00000517378 MYO9AB2RTY4 2548 aa4.63□□□□□ -1.67
CDH12-203ENST00000517378 ATP5G1P05496 136 aa4.63□□□□□ -1.67
CDH12-203ENST00000517378 C5orf38Q86SI9 138 aa4.63□□□□□ -1.67
CDH12-203ENST00000517378 ACANP16112 2415 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms