RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 C5P01031 1676 aa0.9□□□□□ -2.27
SCARNA3-201ENST00000517097 RGPD8O14715 1765 aaPredicted RBP0.9□□□□□ -2.27
SCARNA3-201ENST00000517097 RGPD5Q99666 1765 aa0.9□□□□□ -2.27
SCARNA3-201ENST00000517097 DIP2BQ9P265 1576 aa0.89□□□□□ -2.27
SCARNA3-201ENST00000517097 MAGI2Q86UL8 1455 aa0.89□□□□□ -2.27
SCARNA3-201ENST00000517097 TRBV25-1A0A075B6N4 114 aa0.89□□□□□ -2.27
SCARNA3-201ENST00000517097 CYB5AP00167 134 aa0.89□□□□□ -2.27
SCARNA3-201ENST00000517097 PMCHL1Q16048 86 aa0.89□□□□□ -2.27
SCARNA3-201ENST00000517097 CFAP126Q5VTH2 177 aa0.89□□□□□ -2.27
SCARNA3-201ENST00000517097 SMIM4Q8WVI0 70 aa0.89□□□□□ -2.27
SCARNA3-201ENST00000517097 S100A16Q96FQ6 103 aaKnown RBP0.89□□□□□ -2.27
SCARNA3-201ENST00000517097 ASXL3Q9C0F0 2248 aa0.89□□□□□ -2.27
SCARNA3-201ENST00000517097 TMEM131LA2VDJ0 1609 aa0.89□□□□□ -2.27
SCARNA3-201ENST00000517097 EDC4Q6P2E9 1401 aaKnown RBP0.89□□□□□ -2.27
SCARNA3-201ENST00000517097 UACAQ9BZF9 1416 aa0.89□□□□□ -2.27
SCARNA3-201ENST00000517097 AHCTF1Q8WYP5 2266 aa0.89□□□□□ -2.27
SCARNA3-201ENST00000517097 PPRC1Q5VV67 1664 aaKnown RBP0.88□□□□□ -2.27
SCARNA3-201ENST00000517097 M0R3E3 92 aa0.88□□□□□ -2.27
SCARNA3-201ENST00000517097 SAA2P0DJI9 122 aaPredicted RBP0.88□□□□□ -2.27
SCARNA3-201ENST00000517097 COX17Q14061 63 aa0.88□□□□□ -2.27
SCARNA3-201ENST00000517097 PEA15Q15121 130 aa0.88□□□□□ -2.27
SCARNA3-201ENST00000517097 KRTAP5-7Q6L8G8 165 aa0.88□□□□□ -2.27
SCARNA3-201ENST00000517097 Q6ZRX8 168 aa0.88□□□□□ -2.27
SCARNA3-201ENST00000517097 HIGD1BQ9P298 99 aa0.88□□□□□ -2.27
SCARNA3-201ENST00000517097 PLIN4Q96Q06 1357 aa0.87□□□□□ -2.27
SCARNA3-201ENST00000517097 TARBP1Q13395 1621 aaKnown RBP0.87□□□□□ -2.27
SCARNA3-201ENST00000517097 ZNF815PA8K554 130 aa0.87□□□□□ -2.27
SCARNA3-201ENST00000517097 G3V318 75 aa0.87□□□□□ -2.27
SCARNA3-201ENST00000517097 FXYD6P3P58550 94 aa0.87□□□□□ -2.27
SCARNA3-201ENST00000517097 PSMG4Q5JS54 123 aa0.87□□□□□ -2.27
SCARNA3-201ENST00000517097 SPRR4Q96PI1 79 aa0.87□□□□□ -2.27
SCARNA3-201ENST00000517097 LINC00472Q9H8W2 130 aa0.87□□□□□ -2.27
SCARNA3-201ENST00000517097 ABCC2Q92887 1545 aa0.87□□□□□ -2.27
SCARNA3-201ENST00000517097 RGPD2P0DJD1 1756 aa0.87□□□□□ -2.27
SCARNA3-201ENST00000517097 MUC19Q7Z5P9 8384 aa0.87□□□□□ -2.27
SCARNA3-201ENST00000517097 COL14A1Q05707 1796 aaKnown RBP0.86□□□□□ -2.27
SCARNA3-201ENST00000517097 SCN11AQ9UI33 1791 aa0.86□□□□□ -2.27
SCARNA3-201ENST00000517097 DCAF1Q9Y4B6 1507 aa0.86□□□□□ -2.27
SCARNA3-201ENST00000517097 MGPP08493 103 aa0.86□□□□□ -2.27
SCARNA3-201ENST00000517097 GCHFRP30047 84 aa0.86□□□□□ -2.27
SCARNA3-201ENST00000517097 KRTAP10-4P60372 401 aaPredicted RBP0.86□□□□□ -2.27
SCARNA3-201ENST00000517097 TDRG1Q3Y452 100 aa0.86□□□□□ -2.27
SCARNA3-201ENST00000517097 PRR15LQ9BU68 103 aa0.86□□□□□ -2.27
SCARNA3-201ENST00000517097 XRN1Q8IZH2 1706 aaKnown RBP0.86□□□□□ -2.27
SCARNA3-201ENST00000517097 IQSEC2Q5JU85 1478 aa0.86□□□□□ -2.27
SCARNA3-201ENST00000517097 NHSL1Q5SYE7 1610 aa0.86□□□□□ -2.27
SCARNA3-201ENST00000517097 A0A1B0GWA3 101 aa0.85□□□□□ -2.27
SCARNA3-201ENST00000517097 F8WEM9 126 aa0.85□□□□□ -2.27
SCARNA3-201ENST00000517097 BCE1O60756 84 aa0.85□□□□□ -2.27
SCARNA3-201ENST00000517097 ETDBQ3ZM63 59 aa0.85□□□□□ -2.27
SCARNA3-201ENST00000517097 ZNF720Q7Z2F6 126 aa0.85□□□□□ -2.27
SCARNA3-201ENST00000517097 RABAC1Q9UI14 185 aa0.85□□□□□ -2.27
SCARNA3-201ENST00000517097 ARFGEF2Q9Y6D5 1785 aa0.85□□□□□ -2.27
SCARNA3-201ENST00000517097 LRP6O75581 1613 aa0.85□□□□□ -2.27
SCARNA3-201ENST00000517097 ALKQ9UM73 1620 aa0.85□□□□□ -2.27
SCARNA3-201ENST00000517097 ERVK-7P63135 1459 aa0.85□□□□□ -2.27
SCARNA3-201ENST00000517097 MUC6Q6W4X9 2439 aa0.84□□□□□ -2.27
SCARNA3-201ENST00000517097 A0A087WVE0 104 aa0.84□□□□□ -2.27
SCARNA3-201ENST00000517097 C7orf77A4D0Y5 90 aa0.84□□□□□ -2.27
SCARNA3-201ENST00000517097 H3BQF6 201 aa0.84□□□□□ -2.27
SCARNA3-201ENST00000517097 ARMS2P0C7Q2 107 aa0.84□□□□□ -2.27
SCARNA3-201ENST00000517097 ARL14EPLP0DKL9 152 aa0.84□□□□□ -2.27
SCARNA3-201ENST00000517097 MAP3K1Q13233 1512 aa0.84□□□□□ -2.28
SCARNA3-201ENST00000517097 KDM5DQ9BY66 1539 aa0.84□□□□□ -2.28
SCARNA3-201ENST00000517097 PLCE1Q9P212 2302 aa0.83□□□□□ -2.28
SCARNA3-201ENST00000517097 LAMC1P11047 1609 aa0.83□□□□□ -2.28
SCARNA3-201ENST00000517097 SMIM11AP58511 58 aa0.83□□□□□ -2.28
SCARNA3-201ENST00000517097 Q6JHZ5 121 aa0.83□□□□□ -2.28
SCARNA3-201ENST00000517097 FDCSPQ8NFU4 85 aa0.83□□□□□ -2.28
SCARNA3-201ENST00000517097 S100A13Q99584 98 aa0.83□□□□□ -2.28
SCARNA3-201ENST00000517097 PROK2Q9HC23 129 aa0.83□□□□□ -2.28
SCARNA3-201ENST00000517097 C1orf167Q5SNV9 1468 aa0.83□□□□□ -2.28
SCARNA3-201ENST00000517097 DOPEY2Q9Y3R5 2298 aa0.83□□□□□ -2.28
SCARNA3-201ENST00000517097 PTPN23Q9H3S7 1636 aa0.82□□□□□ -2.28
SCARNA3-201ENST00000517097 KMT2BQ9UMN6 2715 aaPredicted RBP0.82□□□□□ -2.28
SCARNA3-201ENST00000517097 UBR3Q6ZT12 1888 aa0.82□□□□□ -2.28
SCARNA3-201ENST00000517097 A0A0G2JMZ2 1700 aa0.82□□□□□ -2.28
SCARNA3-201ENST00000517097 MYO5CQ9NQX4 1742 aa0.82□□□□□ -2.28
SCARNA3-201ENST00000517097 PIN1P1O15428 100 aa0.82□□□□□ -2.28
SCARNA3-201ENST00000517097 SPINK9Q5DT21 86 aa0.82□□□□□ -2.28
SCARNA3-201ENST00000517097 NMSQ5H8A3 153 aa0.82□□□□□ -2.28
SCARNA3-201ENST00000517097 LINC00846Q9NV44 126 aa0.82□□□□□ -2.28
SCARNA3-201ENST00000517097 PSENENQ9NZ42 101 aa0.82□□□□□ -2.28
SCARNA3-201ENST00000517097 SPCS1Q9Y6A9 102 aa0.82□□□□□ -2.28
SCARNA3-201ENST00000517097 CUX1P39880 1505 aa0.82□□□□□ -2.28
SCARNA3-201ENST00000517097 NEXMIFQ5QGS0 1516 aa0.82□□□□□ -2.28
SCARNA3-201ENST00000517097 URB1O60287 2271 aaKnown RBP0.82□□□□□ -2.28
SCARNA3-201ENST00000517097 RRBP1Q9P2E9 1410 aaKnown RBP0.81□□□□□ -2.28
SCARNA3-201ENST00000517097 RGPD1P0DJD0 1748 aa0.81□□□□□ -2.28
SCARNA3-201ENST00000517097 HMGN2P05204 90 aaKnown RBP0.81□□□□□ -2.28
SCARNA3-201ENST00000517097 SNRPFP62306 86 aaKnown RBP0.81□□□□□ -2.28
SCARNA3-201ENST00000517097 HAMPP81172 84 aa0.81□□□□□ -2.28
SCARNA3-201ENST00000517097 HMGN3Q15651 99 aa0.81□□□□□ -2.28
SCARNA3-201ENST00000517097 C10orf113Q5VZT2 155 aa0.81□□□□□ -2.28
SCARNA3-201ENST00000517097 ALKAL2Q6UX46 152 aa0.81□□□□□ -2.28
SCARNA3-201ENST00000517097 TMEM263Q8WUH6 116 aaKnown RBP0.81□□□□□ -2.28
SCARNA3-201ENST00000517097 ST20Q9HBF5 79 aa0.81□□□□□ -2.28
SCARNA3-201ENST00000517097 CFAP74Q9C0B2 1584 aa0.81□□□□□ -2.28
SCARNA3-201ENST00000517097 QSER1Q2KHR3 1735 aa0.81□□□□□ -2.28
SCARNA3-201ENST00000517097 ERCC6L2Q5T890 1561 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms