RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 RHEBQ15382 184 aa3.82□□□□□ -1.8
SCARNA18.1-201ENST00000516330 LINC01561Q8N1V8 128 aa3.82□□□□□ -1.8
SCARNA18.1-201ENST00000516330 TMEM141Q96I45 108 aa3.82□□□□□ -1.8
SCARNA18.1-201ENST00000516330 C2orf88Q9BSF0 95 aa3.82□□□□□ -1.8
SCARNA18.1-201ENST00000516330 SRRM2Q9UQ35 2752 aaKnown RBP3.81□□□□□ -1.8
SCARNA18.1-201ENST00000516330 IGHV3OR16-9A0A0B4J2B5 98 aa3.81□□□□□ -1.8
SCARNA18.1-201ENST00000516330 LOC107984640A0A0U1RRK4 108 aa3.81□□□□□ -1.8
SCARNA18.1-201ENST00000516330 RPL39P62891 51 aaKnown RBP3.81□□□□□ -1.8
SCARNA18.1-201ENST00000516330 SEC11AP67812 179 aa3.81□□□□□ -1.8
SCARNA18.1-201ENST00000516330 COX6A2Q02221 97 aa3.81□□□□□ -1.8
SCARNA18.1-201ENST00000516330 SPAG11BQ08648 103 aa3.81□□□□□ -1.8
SCARNA18.1-201ENST00000516330 RNF151Q2KHN1 245 aa3.81□□□□□ -1.8
SCARNA18.1-201ENST00000516330 TEX43Q6ZNM6 134 aa3.81□□□□□ -1.8
SCARNA18.1-201ENST00000516330 Q6ZRU5 148 aa3.81□□□□□ -1.8
SCARNA18.1-201ENST00000516330 Q8N8P6 123 aa3.81□□□□□ -1.8
SCARNA18.1-201ENST00000516330 CAMK2N2Q96S95 79 aa3.81□□□□□ -1.8
SCARNA18.1-201ENST00000516330 TIMM17AQ99595 171 aa3.81□□□□□ -1.8
SCARNA18.1-201ENST00000516330 MRPL35Q9NZE8 188 aaKnown RBP3.81□□□□□ -1.8
SCARNA18.1-201ENST00000516330 CARHSP1Q9Y2V2 147 aaKnown RBP3.81□□□□□ -1.8
SCARNA18.1-201ENST00000516330 IGLV4-3A0A075B6K6 122 aa3.8□□□□□ -1.8
SCARNA18.1-201ENST00000516330 A0A087WZ39 114 aa3.8□□□□□ -1.8
SCARNA18.1-201ENST00000516330 A0A096LNI7 61 aa3.8□□□□□ -1.8
SCARNA18.1-201ENST00000516330 PANO1I0J062 215 aa3.8□□□□□ -1.8
SCARNA18.1-201ENST00000516330 J3QL48 77 aa3.8□□□□□ -1.8
SCARNA18.1-201ENST00000516330 NDUFA1O15239 70 aa3.8□□□□□ -1.8
SCARNA18.1-201ENST00000516330 TLX1NBP0CAT3 122 aa3.8□□□□□ -1.8
SCARNA18.1-201ENST00000516330 PTTG1IPP53801 180 aa3.8□□□□□ -1.8
SCARNA18.1-201ENST00000516330 IFITM2Q01629 132 aa3.8□□□□□ -1.8
SCARNA18.1-201ENST00000516330 C2orf66Q6UXQ4 117 aa3.8□□□□□ -1.8
SCARNA18.1-201ENST00000516330 FAM19A3Q7Z5A8 133 aa3.8□□□□□ -1.8
SCARNA18.1-201ENST00000516330 PRSS3P2Q8NHM4 247 aa3.8□□□□□ -1.8
SCARNA18.1-201ENST00000516330 GNB1LQ9BYB4 327 aa3.8□□□□□ -1.8
SCARNA18.1-201ENST00000516330 IGKV2-24A0A0C4DH68 120 aa3.79□□□□□ -1.8
SCARNA18.1-201ENST00000516330 TRBV30A0A0K0K1B3 111 aa3.79□□□□□ -1.8
SCARNA18.1-201ENST00000516330 CHTF8P0CG12 524 aa3.79□□□□□ -1.8
SCARNA18.1-201ENST00000516330 CXCL5P42830 114 aa3.79□□□□□ -1.8
SCARNA18.1-201ENST00000516330 HERVK_113P63121 156 aa3.79□□□□□ -1.8
SCARNA18.1-201ENST00000516330 ODF1Q14990 250 aa3.79□□□□□ -1.8
SCARNA18.1-201ENST00000516330 NDUFA5Q16718 116 aa3.79□□□□□ -1.8
SCARNA18.1-201ENST00000516330 MAJINQ3KP22 176 aa3.79□□□□□ -1.8
SCARNA18.1-201ENST00000516330 RNASE13Q5GAN3 156 aaKnown RBP3.79□□□□□ -1.8
SCARNA18.1-201ENST00000516330 C10orf91Q5T1B1 145 aa3.79□□□□□ -1.8
SCARNA18.1-201ENST00000516330 COMMD7Q86VX2 200 aa3.79□□□□□ -1.8
SCARNA18.1-201ENST00000516330 STPG4Q8N801 248 aa3.79□□□□□ -1.8
SCARNA18.1-201ENST00000516330 ORAOV1Q8WV07 137 aa3.79□□□□□ -1.8
SCARNA18.1-201ENST00000516330 AMELXQ99217 191 aa3.79□□□□□ -1.8
SCARNA18.1-201ENST00000516330 FLG2Q5D862 2391 aaPredicted RBP3.78□□□□□ -1.8
SCARNA18.1-201ENST00000516330 LINC01546A6NGU7 62 aa3.78□□□□□ -1.8
SCARNA18.1-201ENST00000516330 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.78□□□□□ -1.8
SCARNA18.1-201ENST00000516330 UBE2D1P51668 147 aa3.78□□□□□ -1.8
SCARNA18.1-201ENST00000516330 PRR3P79522 188 aaKnown RBP3.78□□□□□ -1.8
SCARNA18.1-201ENST00000516330 FAM104AQ969W3 186 aa3.78□□□□□ -1.8
SCARNA18.1-201ENST00000516330 TOMM6Q96B49 74 aa3.78□□□□□ -1.8
SCARNA18.1-201ENST00000516330 HERC1Q15751 4861 aa3.78□□□□□ -1.8
SCARNA18.1-201ENST00000516330 IGIPA6NJ69 53 aa3.77□□□□□ -1.81
SCARNA18.1-201ENST00000516330 RPL18AQ02543 176 aaKnown RBP3.77□□□□□ -1.81
SCARNA18.1-201ENST00000516330 LINC00242Q5T6M2 205 aa3.77□□□□□ -1.81
SCARNA18.1-201ENST00000516330 SERTAD4-AS1Q5TG53 156 aa3.77□□□□□ -1.81
SCARNA18.1-201ENST00000516330 Q6ZRP5 223 aa3.77□□□□□ -1.81
SCARNA18.1-201ENST00000516330 LINC00173Q6ZV60 143 aa3.77□□□□□ -1.81
SCARNA18.1-201ENST00000516330 ERASQ7Z444 233 aa3.77□□□□□ -1.81
SCARNA18.1-201ENST00000516330 C5orf38Q86SI9 138 aa3.77□□□□□ -1.81
SCARNA18.1-201ENST00000516330 Q8IZM0 81 aa3.77□□□□□ -1.81
SCARNA18.1-201ENST00000516330 SVBPQ8N300 66 aa3.77□□□□□ -1.81
SCARNA18.1-201ENST00000516330 DPH3Q96FX2 82 aa3.77□□□□□ -1.81
SCARNA18.1-201ENST00000516330 VCX2Q9H322 139 aa3.77□□□□□ -1.81
SCARNA18.1-201ENST00000516330 LOC389332A0A1B0GUA5 103 aa3.76□□□□□ -1.81
SCARNA18.1-201ENST00000516330 SNAPINO95295 136 aa3.76□□□□□ -1.81
SCARNA18.1-201ENST00000516330 LINC00526Q96FQ7 95 aa3.76□□□□□ -1.81
SCARNA18.1-201ENST00000516330 PACRGQ96M98 296 aaPredicted RBP3.76□□□□□ -1.81
SCARNA18.1-201ENST00000516330 SMCO4Q9NRQ5 59 aa3.76□□□□□ -1.81
SCARNA18.1-201ENST00000516330 IGLV5-45A0A087WSX0 123 aa3.75□□□□□ -1.81
SCARNA18.1-201ENST00000516330 NDUFC2-KCTD14E9PQ53 114 aa3.75□□□□□ -1.81
SCARNA18.1-201ENST00000516330 PRSS2P07478 247 aa3.75□□□□□ -1.81
SCARNA18.1-201ENST00000516330 GAGE2BQ13066 116 aa3.75□□□□□ -1.81
SCARNA18.1-201ENST00000516330 KIAA0087Q14695 138 aa3.75□□□□□ -1.81
SCARNA18.1-201ENST00000516330 C9orf116Q5BN46 136 aaPredicted RBP3.75□□□□□ -1.81
SCARNA18.1-201ENST00000516330 SPINK6Q6UWN8 80 aa3.75□□□□□ -1.81
SCARNA18.1-201ENST00000516330 OPRPNQ99935 248 aaPredicted RBP3.75□□□□□ -1.81
SCARNA18.1-201ENST00000516330 ALKBH7Q9BT30 221 aaPredicted RBP3.75□□□□□ -1.81
SCARNA18.1-201ENST00000516330 GEMIN7Q9H840 131 aaKnown RBP3.75□□□□□ -1.81
SCARNA18.1-201ENST00000516330 RPS10P5Q9NQ39 176 aa3.75□□□□□ -1.81
SCARNA18.1-201ENST00000516330 A0A0J9YXV3 536 aa3.74□□□□□ -1.81
SCARNA18.1-201ENST00000516330 TINCRA0A1B0GVN0 87 aa3.74□□□□□ -1.81
SCARNA18.1-201ENST00000516330 F8VRH5 84 aa3.74□□□□□ -1.81
SCARNA18.1-201ENST00000516330 HNRNPA3P51991 378 aaKnown RBP3.74□□□□□ -1.81
SCARNA18.1-201ENST00000516330 SFTA2Q6UW10 78 aa3.74□□□□□ -1.81
SCARNA18.1-201ENST00000516330 REG3GQ6UW15 175 aa3.74□□□□□ -1.81
SCARNA18.1-201ENST00000516330 FA2HQ7L5A8 372 aa3.74□□□□□ -1.81
SCARNA18.1-201ENST00000516330 MRPL18Q9H0U6 180 aaKnown RBP3.74□□□□□ -1.81
SCARNA18.1-201ENST00000516330 C6orf48Q9UBA6 75 aa3.74□□□□□ -1.81
SCARNA18.1-201ENST00000516330 PKHD1L1Q86WI1 4243 aa3.74□□□□□ -1.81
SCARNA18.1-201ENST00000516330 FAT3Q8TDW7 4589 aa3.73□□□□□ -1.81
SCARNA18.1-201ENST00000516330 SMIM1B2RUZ4 78 aa3.73□□□□□ -1.81
SCARNA18.1-201ENST00000516330 HBDP02042 147 aa3.73□□□□□ -1.81
SCARNA18.1-201ENST00000516330 RAB5BP61020 215 aa3.73□□□□□ -1.81
SCARNA18.1-201ENST00000516330 CKS1BP61024 79 aa3.73□□□□□ -1.81
SCARNA18.1-201ENST00000516330 PMVKQ15126 192 aa3.73□□□□□ -1.81
SCARNA18.1-201ENST00000516330 KIAA1644Q3SXP7 199 aa3.73□□□□□ -1.81
SCARNA18.1-201ENST00000516330 PDZD11Q5EBL8 140 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms