RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 WNK1Q9H4A3 2382 aa11.99□□□□□ -0.49
TSPAN17-209ENST00000515708 CCDC168Q8NDH2 2452 aa11.99□□□□□ -0.49
TSPAN17-209ENST00000515708 F5H768 121 aa11.99□□□□□ -0.49
TSPAN17-209ENST00000515708 AKAP9Q99996 3911 aa11.99□□□□□ -0.49
TSPAN17-209ENST00000515708 TRAV25A0A0B4J276 109 aa11.98□□□□□ -0.49
TSPAN17-209ENST00000515708 MRPL23Q16540 153 aaKnown RBP11.98□□□□□ -0.49
TSPAN17-209ENST00000515708 HELZ2Q9BYK8 2649 aaKnown RBP11.98□□□□□ -0.49
TSPAN17-209ENST00000515708 C2CD3Q4AC94 2353 aa11.97□□□□□ -0.49
TSPAN17-209ENST00000515708 CUBNO60494 3623 aa11.96□□□□□ -0.49
TSPAN17-209ENST00000515708 NOTCH3Q9UM47 2321 aa11.96□□□□□ -0.5
TSPAN17-209ENST00000515708 Q96MF0 132 aa11.94□□□□□ -0.5
TSPAN17-209ENST00000515708 DEFB113Q30KQ7 82 aa11.94□□□□□ -0.5
TSPAN17-209ENST00000515708 C11orf44Q8N8P7 122 aa11.94□□□□□ -0.5
TSPAN17-209ENST00000515708 NOP10Q9NPE3 64 aaKnown RBP11.94□□□□□ -0.5
TSPAN17-209ENST00000515708 KMT2BQ9UMN6 2715 aaPredicted RBP11.94□□□□□ -0.5
TSPAN17-209ENST00000515708 A0A1W2PRX2 142 aa11.93□□□□□ -0.5
TSPAN17-209ENST00000515708 HIST2H2BCQ6DN03 193 aa11.93□□□□□ -0.5
TSPAN17-209ENST00000515708 TMEM243Q9BU79 118 aa11.93□□□□□ -0.5
TSPAN17-209ENST00000515708 UBE2L6O14933 153 aa11.92□□□□□ -0.5
TSPAN17-209ENST00000515708 SONP18583 2426 aaKnown RBP11.92□□□□□ -0.5
TSPAN17-209ENST00000515708 NF1P21359 2839 aa11.92□□□□□ -0.5
TSPAN17-209ENST00000515708 ITPR3Q14573 2671 aa11.91□□□□□ -0.5
TSPAN17-209ENST00000515708 CCL24O00175 119 aa11.91□□□□□ -0.5
TSPAN17-209ENST00000515708 TRACP01848 142 aa11.91□□□□□ -0.5
TSPAN17-209ENST00000515708 TMEM86BQ8N661 226 aa11.91□□□□□ -0.5
TSPAN17-209ENST00000515708 JMJD1CQ15652 2540 aa11.9□□□□□ -0.5
TSPAN17-209ENST00000515708 ITPR2Q14571 2701 aa11.9□□□□□ -0.5
TSPAN17-209ENST00000515708 GIG44P09565 113 aaPredicted RBP11.9□□□□□ -0.51
TSPAN17-209ENST00000515708 SETXQ7Z333 2677 aaKnown RBP11.89□□□□□ -0.51
TSPAN17-209ENST00000515708 TRBV7-7A0A0K0K1E9 115 aa11.89□□□□□ -0.51
TSPAN17-209ENST00000515708 PLAC8L1A1L4L8 177 aa11.89□□□□□ -0.51
TSPAN17-209ENST00000515708 ACYP1P07311 99 aa11.89□□□□□ -0.51
TSPAN17-209ENST00000515708 LRRC75A-AS1Q8N1F1 130 aa11.89□□□□□ -0.51
TSPAN17-209ENST00000515708 FAM218AQ96MZ4 157 aa11.89□□□□□ -0.51
TSPAN17-209ENST00000515708 CHCHD5Q9BSY4 110 aa11.89□□□□□ -0.51
TSPAN17-209ENST00000515708 NIPBLQ6KC79 2804 aaeCLIP11.89□□□□□ -0.51
TSPAN17-209ENST00000515708 LOC100131303A0A0U1RQF7 123 aa11.89□□□□□ -0.51
TSPAN17-209ENST00000515708 C3orf56Q8N813 242 aa11.89□□□□□ -0.51
TSPAN17-209ENST00000515708 TRGV2A0A075B6R0 118 aa11.88□□□□□ -0.51
TSPAN17-209ENST00000515708 DNAJC9-AS1A6NH13 148 aa11.88□□□□□ -0.51
TSPAN17-209ENST00000515708 BAALC-AS2P0C853 105 aa11.87□□□□□ -0.51
TSPAN17-209ENST00000515708 SMIM9A6NGZ8 99 aa11.87□□□□□ -0.51
TSPAN17-209ENST00000515708 WIPF1O43516 503 aa11.87□□□□□ -0.51
TSPAN17-209ENST00000515708 COX7B2Q8TF08 81 aa11.87□□□□□ -0.51
TSPAN17-209ENST00000515708 C16orf74Q96GX8 76 aa11.87□□□□□ -0.51
TSPAN17-209ENST00000515708 PF4P02776 101 aa11.86□□□□□ -0.51
TSPAN17-209ENST00000515708 FLNAP21333 2647 aaKnown RBP11.86□□□□□ -0.51
TSPAN17-209ENST00000515708 C22orf24Q9Y442 160 aa11.86□□□□□ -0.51
TSPAN17-209ENST00000515708 TRAV13-2A0A0B4J235 113 aa11.86□□□□□ -0.51
TSPAN17-209ENST00000515708 KRTAP1-3Q8IUG1 177 aa11.86□□□□□ -0.51
TSPAN17-209ENST00000515708 MIR7-3HGQ8N6C7 128 aa11.86□□□□□ -0.51
TSPAN17-209ENST00000515708 TRBV6-4A0A1B0GX49 114 aa11.85□□□□□ -0.51
TSPAN17-209ENST00000515708 WFDC10AQ9H1F0 79 aa11.85□□□□□ -0.51
TSPAN17-209ENST00000515708 SETD2Q9BYW2 2564 aaPredicted RBP11.85□□□□□ -0.51
TSPAN17-209ENST00000515708 CRPP02741 224 aa11.85□□□□□ -0.51
TSPAN17-209ENST00000515708 RPL28P46779 137 aaKnown RBP11.85□□□□□ -0.51
TSPAN17-209ENST00000515708 FAM222AQ5U5X8 452 aa11.85□□□□□ -0.51
TSPAN17-209ENST00000515708 LINC00337Q8N6G1 96 aa11.85□□□□□ -0.51
TSPAN17-209ENST00000515708 ACANP16112 2415 aa11.85□□□□□ -0.51
TSPAN17-209ENST00000515708 TOMM7Q9P0U1 55 aa11.84□□□□□ -0.51
TSPAN17-209ENST00000515708 IGKV2-28A0A075B6P5 120 aa11.84□□□□□ -0.51
TSPAN17-209ENST00000515708 IGKV2D-28P01615 120 aa11.84□□□□□ -0.51
TSPAN17-209ENST00000515708 SMCR5Q8TEV8 140 aa11.84□□□□□ -0.51
TSPAN17-209ENST00000515708 IGKV3OR2-268A0A0C4DH90 116 aa11.83□□□□□ -0.52
TSPAN17-209ENST00000515708 SND1-IT1Q9HBX3 110 aa11.83□□□□□ -0.52
TSPAN17-209ENST00000515708 PDZD2O15018 2839 aa11.83□□□□□ -0.52
TSPAN17-209ENST00000515708 IGLV4-60A0A075B6I1 120 aa11.83□□□□□ -0.52
TSPAN17-209ENST00000515708 TRGV4A0A0C4DH28 118 aa11.83□□□□□ -0.52
TSPAN17-209ENST00000515708 RPL35AP18077 110 aaKnown RBP11.83□□□□□ -0.52
TSPAN17-209ENST00000515708 ESM1Q9NQ30 184 aa11.83□□□□□ -0.52
TSPAN17-209ENST00000515708 LOC107984640A0A0U1RRK4 108 aa11.82□□□□□ -0.52
TSPAN17-209ENST00000515708 OVOL2Q9BRP0 275 aa11.82□□□□□ -0.52
TSPAN17-209ENST00000515708 J3KT08 172 aa11.82□□□□□ -0.52
TSPAN17-209ENST00000515708 CMC4P56277 68 aaPredicted RBP11.82□□□□□ -0.52
TSPAN17-209ENST00000515708 IMUPQ9GZP8 106 aa11.82□□□□□ -0.52
TSPAN17-209ENST00000515708 Q9HAA7 133 aa11.82□□□□□ -0.52
TSPAN17-209ENST00000515708 IGHV3OR16-9A0A0B4J2B5 98 aa11.81□□□□□ -0.52
TSPAN17-209ENST00000515708 UNC79Q9P2D8 2635 aa11.81□□□□□ -0.52
TSPAN17-209ENST00000515708 TRBV6-8A0A0A6YYG3 113 aa11.81□□□□□ -0.52
TSPAN17-209ENST00000515708 PLA2G2AP14555 144 aa11.81□□□□□ -0.52
TSPAN17-209ENST00000515708 LINC00158P58513 81 aa11.81□□□□□ -0.52
TSPAN17-209ENST00000515708 C9orf153Q5TBE3 101 aa11.81□□□□□ -0.52
TSPAN17-209ENST00000515708 SDIM1Q6ZPB5 146 aa11.81□□□□□ -0.52
TSPAN17-209ENST00000515708 LINC00643Q86TS7 51 aa11.81□□□□□ -0.52
TSPAN17-209ENST00000515708 CSNK1G2-AS1Q8NCQ2 148 aa11.81□□□□□ -0.52
TSPAN17-209ENST00000515708 FAM19A5Q7Z5A7 132 aaPredicted RBP11.8□□□□□ -0.52
TSPAN17-209ENST00000515708 WFDC11Q8NEX6 87 aa11.8□□□□□ -0.52
TSPAN17-209ENST00000515708 C19orf73Q9NVV2 129 aa11.8□□□□□ -0.52
TSPAN17-209ENST00000515708 A0A1B0GX51 115 aa11.79□□□□□ -0.52
TSPAN17-209ENST00000515708 MALP21145 153 aa11.79□□□□□ -0.52
TSPAN17-209ENST00000515708 FHL2Q14192 279 aa11.79□□□□□ -0.52
TSPAN17-209ENST00000515708 C3orf22Q8N5N4 141 aa11.79□□□□□ -0.52
TSPAN17-209ENST00000515708 GCN1Q92616 2671 aaKnown RBP11.79□□□□□ -0.52
TSPAN17-209ENST00000515708 INAFM2P0DMQ5 153 aa11.78□□□□□ -0.52
TSPAN17-209ENST00000515708 CCL18P55774 89 aa11.78□□□□□ -0.52
TSPAN17-209ENST00000515708 SMIM11BQ8TCY0 68 aa11.78□□□□□ -0.52
TSPAN17-209ENST00000515708 FAM236AA0A1B0GUQ0 79 aa11.78□□□□□ -0.52
TSPAN17-209ENST00000515708 FAM236BA0A1B0GV22 79 aa11.78□□□□□ -0.52
TSPAN17-209ENST00000515708 A0A087WZ39 114 aa11.77□□□□□ -0.52
TSPAN17-209ENST00000515708 IGLV1-51P01701 117 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms