RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 KIR2DL5BQ8NHK3 375 aa10.54□□□□□ -0.72
TRIO-222ENST00000515144 HTTP42858 3142 aa10.53□□□□□ -0.72
TRIO-222ENST00000515144 LELP1Q5T871 98 aa10.53□□□□□ -0.72
TRIO-222ENST00000515144 C11orf1Q9H5F2 150 aa10.52□□□□□ -0.73
TRIO-222ENST00000515144 A0A0J9YXY3 114 aa10.52□□□□□ -0.73
TRIO-222ENST00000515144 C1orf158Q8N1D5 194 aa10.52□□□□□ -0.73
TRIO-222ENST00000515144 RNASE3P12724 160 aaKnown RBP10.52□□□□□ -0.73
TRIO-222ENST00000515144 CIRBP-AS1Q8TBR5 109 aa10.51□□□□□ -0.73
TRIO-222ENST00000515144 C3orf84H3BNL1 204 aa10.51□□□□□ -0.73
TRIO-222ENST00000515144 PLAC8L1A1L4L8 177 aa10.51□□□□□ -0.73
TRIO-222ENST00000515144 H7C423 109 aa10.5□□□□□ -0.73
TRIO-222ENST00000515144 MP68P56378 58 aa10.49□□□□□ -0.73
TRIO-222ENST00000515144 CASC2Q6XLA1 102 aa10.49□□□□□ -0.73
TRIO-222ENST00000515144 ACYP1P07311 99 aa10.48□□□□□ -0.73
TRIO-222ENST00000515144 WFDC2Q14508 124 aa10.48□□□□□ -0.73
TRIO-222ENST00000515144 CRIP2P52943 208 aaPredicted RBP10.48□□□□□ -0.73
TRIO-222ENST00000515144 USP9YO00507 2555 aaPredicted RBP10.48□□□□□ -0.73
TRIO-222ENST00000515144 IGLC6P0CF74 106 aa10.47□□□□□ -0.73
TRIO-222ENST00000515144 MTORP42345 2549 aa10.47□□□□□ -0.73
TRIO-222ENST00000515144 A0A0B4J2C4 111 aa10.47□□□□□ -0.73
TRIO-222ENST00000515144 C9orf116Q5BN46 136 aaPredicted RBP10.47□□□□□ -0.73
TRIO-222ENST00000515144 LINC00959A0A1B0GUT2 108 aa10.47□□□□□ -0.73
TRIO-222ENST00000515144 ODF3L2Q3SX64 289 aa10.47□□□□□ -0.73
TRIO-222ENST00000515144 TRAV23DV6A0A075B6W5 121 aa10.46□□□□□ -0.73
TRIO-222ENST00000515144 MRGPRG-AS1Q2M3A8 158 aa10.46□□□□□ -0.73
TRIO-222ENST00000515144 RNF185Q96GF1 192 aa10.46□□□□□ -0.73
TRIO-222ENST00000515144 IGLV4-69A0A075B6H9 119 aa10.46□□□□□ -0.73
TRIO-222ENST00000515144 LOC107984640A0A0U1RRK4 108 aa10.46□□□□□ -0.73
TRIO-222ENST00000515144 UBE2D2P62837 147 aa10.46□□□□□ -0.74
TRIO-222ENST00000515144 H3BQ85 93 aa10.45□□□□□ -0.74
TRIO-222ENST00000515144 TMEM223A0PJW6 202 aa10.45□□□□□ -0.74
TRIO-222ENST00000515144 MRPL52Q86TS9 123 aaKnown RBP10.45□□□□□ -0.74
TRIO-222ENST00000515144 IGLV1-51P01701 117 aa10.45□□□□□ -0.74
TRIO-222ENST00000515144 LINC01620Q4KN68 170 aa10.45□□□□□ -0.74
TRIO-222ENST00000515144 CD164L2Q6UWJ8 174 aa10.45□□□□□ -0.74
TRIO-222ENST00000515144 VPS13AQ96RL7 3174 aa10.45□□□□□ -0.74
TRIO-222ENST00000515144 TSHBP01222 138 aa10.45□□□□□ -0.74
TRIO-222ENST00000515144 C11orf21Q9P2W6 132 aa10.45□□□□□ -0.74
TRIO-222ENST00000515144 GAS8-AS1O95177 125 aa10.44□□□□□ -0.74
TRIO-222ENST00000515144 PTH2Q96A98 100 aa10.44□□□□□ -0.74
TRIO-222ENST00000515144 TP73-AS1Q9UF72 201 aa10.44□□□□□ -0.74
TRIO-222ENST00000515144 MLST8Q9BVC4 326 aa10.44□□□□□ -0.74
TRIO-222ENST00000515144 SPANXCQ9NY87 97 aa10.44□□□□□ -0.74
TRIO-222ENST00000515144 C1orf134Q5TEV5 83 aa10.44□□□□□ -0.74
TRIO-222ENST00000515144 SEC61GP60059 68 aa10.44□□□□□ -0.74
TRIO-222ENST00000515144 PKD1L2Q7Z442 2459 aa10.44□□□□□ -0.74
TRIO-222ENST00000515144 BPY2O14599 106 aa10.43□□□□□ -0.74
TRIO-222ENST00000515144 C6orf99Q4VX62 202 aa10.43□□□□□ -0.74
TRIO-222ENST00000515144 A0A1B0GXF2 115 aa10.43□□□□□ -0.74
TRIO-222ENST00000515144 JMJD7-PLA2G4BH0Y9G9 81 aa10.43□□□□□ -0.74
TRIO-222ENST00000515144 C16orf95Q9H693 158 aa10.42□□□□□ -0.74
TRIO-222ENST00000515144 ZNF22P17026 224 aaPredicted RBP10.42□□□□□ -0.74
TRIO-222ENST00000515144 C6orf223Q8N319 242 aa10.42□□□□□ -0.74
TRIO-222ENST00000515144 M0QXV9 152 aa10.42□□□□□ -0.74
TRIO-222ENST00000515144 LINC01556Q5JQF7 62 aa10.42□□□□□ -0.74
TRIO-222ENST00000515144 FAM236AA0A1B0GUQ0 79 aa10.41□□□□□ -0.74
TRIO-222ENST00000515144 FAM236BA0A1B0GV22 79 aa10.41□□□□□ -0.74
TRIO-222ENST00000515144 TCL1BO95988 128 aa10.41□□□□□ -0.74
TRIO-222ENST00000515144 KLLNB2CW77 178 aa10.41□□□□□ -0.74
TRIO-222ENST00000515144 RETNLBQ9BQ08 111 aa10.4□□□□□ -0.74
TRIO-222ENST00000515144 REV3LO60673 3130 aa10.4□□□□□ -0.75
TRIO-222ENST00000515144 TRBV6-5A0A0K0K1A5 114 aa10.4□□□□□ -0.75
TRIO-222ENST00000515144 SPANXB1Q9NS25 103 aaPredicted RBP10.39□□□□□ -0.75
TRIO-222ENST00000515144 NRACQ8N912 160 aa10.39□□□□□ -0.75
TRIO-222ENST00000515144 CYSRT1A8MQ03 144 aa10.39□□□□□ -0.75
TRIO-222ENST00000515144 UPK3BQ9BT76 320 aa10.39□□□□□ -0.75
TRIO-222ENST00000515144 IBA57-AS1B1ANH7 110 aa10.39□□□□□ -0.75
TRIO-222ENST00000515144 LINC00308Q8TCZ7 52 aa10.38□□□□□ -0.75
TRIO-222ENST00000515144 PRR3P79522 188 aaKnown RBP10.38□□□□□ -0.75
TRIO-222ENST00000515144 LAMA1P25391 3075 aa10.38□□□□□ -0.75
TRIO-222ENST00000515144 MAPKAPK5-AS1Q8N8E1 139 aa10.38□□□□□ -0.75
TRIO-222ENST00000515144 C1orf137Q5JT78 98 aa10.37□□□□□ -0.75
TRIO-222ENST00000515144 USP24Q9UPU5 2620 aa10.37□□□□□ -0.75
TRIO-222ENST00000515144 TEX49A0A1B0GTD5 131 aa10.37□□□□□ -0.75
TRIO-222ENST00000515144 LINC00474Q9P2X8 69 aa10.37□□□□□ -0.75
TRIO-222ENST00000515144 COX6A2Q02221 97 aa10.37□□□□□ -0.75
TRIO-222ENST00000515144 SDIM1Q6ZPB5 146 aa10.37□□□□□ -0.75
TRIO-222ENST00000515144 FHL3Q13643 280 aa10.36□□□□□ -0.75
TRIO-222ENST00000515144 UNQ6190/PRO20217Q6UXQ8 127 aa10.36□□□□□ -0.75
TRIO-222ENST00000515144 EYSQ5T1H1 3165 aa10.36□□□□□ -0.75
TRIO-222ENST00000515144 WDFY4Q6ZS81 3184 aa10.36□□□□□ -0.75
TRIO-222ENST00000515144 SPANXDQ9BXN6 97 aa10.36□□□□□ -0.75
TRIO-222ENST00000515144 VCANP13611 3396 aa10.36□□□□□ -0.75
TRIO-222ENST00000515144 CCKP06307 115 aa10.36□□□□□ -0.75
TRIO-222ENST00000515144 IGLV4-60A0A075B6I1 120 aa10.36□□□□□ -0.75
TRIO-222ENST00000515144 COL6A3P12111 3177 aa10.35□□□□□ -0.75
TRIO-222ENST00000515144 USP17L23D6RBM5 183 aa10.35□□□□□ -0.75
TRIO-222ENST00000515144 TRBV27A0A0K0K1C4 114 aa10.35□□□□□ -0.75
TRIO-222ENST00000515144 ZNF706Q9Y5V0 76 aaPredicted RBP10.35□□□□□ -0.75
TRIO-222ENST00000515144 FHL2Q14192 279 aa10.34□□□□□ -0.75
TRIO-222ENST00000515144 HIGD1BQ9P298 99 aa10.34□□□□□ -0.75
TRIO-222ENST00000515144 CELA1Q9UNI1 258 aa10.34□□□□□ -0.75
TRIO-222ENST00000515144 M0R378 163 aa10.33□□□□□ -0.76
TRIO-222ENST00000515144 LINC00694P0DN24 101 aa10.33□□□□□ -0.76
TRIO-222ENST00000515144 CDC42SE2Q9NRR3 84 aa10.33□□□□□ -0.76
TRIO-222ENST00000515144 KRTAP24-1Q3LI83 254 aa10.33□□□□□ -0.76
TRIO-222ENST00000515144 SMIM11BQ8TCY0 68 aa10.33□□□□□ -0.76
TRIO-222ENST00000515144 USP34Q70CQ2 3546 aa10.32□□□□□ -0.76
TRIO-222ENST00000515144 TEN1Q86WV5 123 aa10.32□□□□□ -0.76
TRIO-222ENST00000515144 MDFIQ99750 246 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms