RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 A0A0U1RQV1 116 aa7.46□□□□□ -1.22
SDHA-215ENST00000512962 COLCA2A8K830 154 aa7.46□□□□□ -1.22
SDHA-215ENST00000512962 HIGD2BQ4VC39 106 aa7.46□□□□□ -1.22
SDHA-215ENST00000512962 KRTAP4-2Q9BYR5 136 aa7.46□□□□□ -1.22
SDHA-215ENST00000512962 RPP21Q9H633 154 aaKnown RBP7.46□□□□□ -1.22
SDHA-215ENST00000512962 RPS10P5Q9NQ39 176 aa7.46□□□□□ -1.22
SDHA-215ENST00000512962 IGLV4-60A0A075B6I1 120 aa7.45□□□□□ -1.22
SDHA-215ENST00000512962 K7EN84 100 aa7.45□□□□□ -1.22
SDHA-215ENST00000512962 COTL1Q14019 142 aa7.45□□□□□ -1.22
SDHA-215ENST00000512962 SMIM29Q86T20 159 aa7.45□□□□□ -1.22
SDHA-215ENST00000512962 TMEM250H0YL14 139 aa7.44□□□□□ -1.22
SDHA-215ENST00000512962 GATD1Q8NB37 220 aa7.44□□□□□ -1.22
SDHA-215ENST00000512962 RNASE7Q9H1E1 156 aaKnown RBP7.44□□□□□ -1.22
SDHA-215ENST00000512962 FSIP2Q5CZC0 6907 aa7.44□□□□□ -1.22
SDHA-215ENST00000512962 UBE2L6O14933 153 aa7.43□□□□□ -1.22
SDHA-215ENST00000512962 MT-ND4LP03901 98 aa7.43□□□□□ -1.22
SDHA-215ENST00000512962 Q6ZRP5 223 aa7.43□□□□□ -1.22
SDHA-215ENST00000512962 YPEL4Q96NS1 127 aa7.43□□□□□ -1.22
SDHA-215ENST00000512962 NCR2O95944 276 aa7.42□□□□□ -1.22
SDHA-215ENST00000512962 RPS10P46783 165 aaKnown RBP7.42□□□□□ -1.22
SDHA-215ENST00000512962 FOXA3P55318 350 aaPredicted RBP7.42□□□□□ -1.22
SDHA-215ENST00000512962 FAM231DQ6ZW35 169 aa7.42□□□□□ -1.22
SDHA-215ENST00000512962 TRAV26-2A0A0B4J265 109 aa7.41□□□□□ -1.22
SDHA-215ENST00000512962 FAM231BA6NCW3 169 aa7.41□□□□□ -1.22
SDHA-215ENST00000512962 A8MWL6 223 aa7.41□□□□□ -1.22
SDHA-215ENST00000512962 H7C423 109 aa7.41□□□□□ -1.22
SDHA-215ENST00000512962 CEBPGP53567 150 aa7.41□□□□□ -1.22
SDHA-215ENST00000512962 PRR4Q16378 134 aa7.41□□□□□ -1.22
SDHA-215ENST00000512962 SMIM15Q7Z3B0 74 aa7.41□□□□□ -1.22
SDHA-215ENST00000512962 GATCO43716 136 aaKnown RBP7.4□□□□□ -1.22
SDHA-215ENST00000512962 ISOC2Q96AB3 205 aa7.4□□□□□ -1.22
SDHA-215ENST00000512962 TRBV6-5A0A0K0K1A5 114 aa7.39□□□□□ -1.23
SDHA-215ENST00000512962 C1orf196B1AJZ1 125 aa7.39□□□□□ -1.23
SDHA-215ENST00000512962 RAB5AP20339 215 aa7.39□□□□□ -1.23
SDHA-215ENST00000512962 RAB5BP61020 215 aa7.39□□□□□ -1.23
SDHA-215ENST00000512962 RPL39LQ96EH5 51 aaKnown RBP7.39□□□□□ -1.23
SDHA-215ENST00000512962 LINC00526Q96FQ7 95 aa7.39□□□□□ -1.23
SDHA-215ENST00000512962 CRCT1Q9UGL9 99 aa7.39□□□□□ -1.23
SDHA-215ENST00000512962 NAT8Q9UHE5 227 aa7.39□□□□□ -1.23
SDHA-215ENST00000512962 SDHAF1A6NFY7 115 aa7.38□□□□□ -1.23
SDHA-215ENST00000512962 ZNF727A8MUV8 499 aa7.38□□□□□ -1.23
SDHA-215ENST00000512962 SMIM7Q9BQ49 75 aa7.38□□□□□ -1.23
SDHA-215ENST00000512962 ALKBH7Q9BT30 221 aaPredicted RBP7.38□□□□□ -1.23
SDHA-215ENST00000512962 TMEM242Q9NWH2 141 aa7.38□□□□□ -1.23
SDHA-215ENST00000512962 PSORS1C2Q9UIG4 136 aa7.38□□□□□ -1.23
SDHA-215ENST00000512962 GVQW2A0A096LPI5 108 aaPredicted RBP7.37□□□□□ -1.23
SDHA-215ENST00000512962 APCSP02743 223 aa7.37□□□□□ -1.23
SDHA-215ENST00000512962 FGF6P10767 208 aa7.37□□□□□ -1.23
SDHA-215ENST00000512962 ZNF25P17030 456 aaPredicted RBP7.37□□□□□ -1.23
SDHA-215ENST00000512962 LINC01547P58512 204 aaPredicted RBP7.37□□□□□ -1.23
SDHA-215ENST00000512962 AMMECR1LQ6DCA0 310 aa7.37□□□□□ -1.23
SDHA-215ENST00000512962 ZNF664Q8N3J9 261 aa7.37□□□□□ -1.23
SDHA-215ENST00000512962 CHCHD10Q8WYQ3 142 aaPredicted RBP7.37□□□□□ -1.23
SDHA-215ENST00000512962 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.36□□□□□ -1.23
SDHA-215ENST00000512962 A0A1W2PNN7 141 aa7.36□□□□□ -1.23
SDHA-215ENST00000512962 IGKV2-29A2NJV5 120 aaPredicted RBP7.36□□□□□ -1.23
SDHA-215ENST00000512962 SMIM1B2RUZ4 78 aa7.36□□□□□ -1.23
SDHA-215ENST00000512962 I3L3M4 83 aa7.36□□□□□ -1.23
SDHA-215ENST00000512962 TMEM241Q24JQ0 296 aa7.36□□□□□ -1.23
SDHA-215ENST00000512962 KIAA1644Q3SXP7 199 aa7.36□□□□□ -1.23
SDHA-215ENST00000512962 RNASEKQ6P5S7 137 aaKnown RBP7.36□□□□□ -1.23
SDHA-215ENST00000512962 LINC01551Q86U37 167 aa7.36□□□□□ -1.23
SDHA-215ENST00000512962 TSKUQ8WUA8 353 aa7.36□□□□□ -1.23
SDHA-215ENST00000512962 TMEM191AQ9H0A3 160 aa7.36□□□□□ -1.23
SDHA-215ENST00000512962 IGKV3OR2-268A0A0C4DH90 116 aa7.35□□□□□ -1.23
SDHA-215ENST00000512962 A0A1B0GUT8 65 aa7.35□□□□□ -1.23
SDHA-215ENST00000512962 ESDP10768 282 aa7.35□□□□□ -1.23
SDHA-215ENST00000512962 PMCHP20382 165 aa7.35□□□□□ -1.23
SDHA-215ENST00000512962 RPL23P62829 140 aaKnown RBP7.35□□□□□ -1.23
SDHA-215ENST00000512962 OR5A1Q8NGJ0 315 aa7.35□□□□□ -1.23
SDHA-215ENST00000512962 BORCS7Q96B45 105 aa7.35□□□□□ -1.23
SDHA-215ENST00000512962 ST20Q9HBF5 79 aa7.35□□□□□ -1.23
SDHA-215ENST00000512962 OSTCQ9NRP0 149 aa7.35□□□□□ -1.23
SDHA-215ENST00000512962 TRBV27A0A0K0K1C4 114 aa7.34□□□□□ -1.23
SDHA-215ENST00000512962 HIGD1CA8MV81 97 aa7.34□□□□□ -1.23
SDHA-215ENST00000512962 KRTAP1-4P0C5Y4 121 aa7.34□□□□□ -1.23
SDHA-215ENST00000512962 POLR2KP53803 58 aaKnown RBP7.34□□□□□ -1.23
SDHA-215ENST00000512962 ADIRFQ15847 76 aa7.34□□□□□ -1.23
SDHA-215ENST00000512962 KRTAP11-1Q8IUC1 163 aa7.34□□□□□ -1.23
SDHA-215ENST00000512962 MRAP2Q96G30 205 aa7.34□□□□□ -1.23
SDHA-215ENST00000512962 TRBV24-1A0A075B6N3 115 aa7.33□□□□□ -1.24
SDHA-215ENST00000512962 TGIF2-C20orf24A0A0A6YYL0 155 aa7.33□□□□□ -1.24
SDHA-215ENST00000512962 RAB4AP20338 218 aa7.33□□□□□ -1.24
SDHA-215ENST00000512962 MRPL52Q86TS9 123 aaKnown RBP7.33□□□□□ -1.24
SDHA-215ENST00000512962 LINC00518Q8N0U6 118 aa7.33□□□□□ -1.24
SDHA-215ENST00000512962 TMEM101Q96IK0 257 aa7.33□□□□□ -1.24
SDHA-215ENST00000512962 BTF3L4Q96K17 158 aa7.33□□□□□ -1.24
SDHA-215ENST00000512962 LINC00959A0A1B0GUT2 108 aa7.32□□□□□ -1.24
SDHA-215ENST00000512962 S100A6P06703 90 aa7.31□□□□□ -1.24
SDHA-215ENST00000512962 C1orf137Q5JT78 98 aa7.31□□□□□ -1.24
SDHA-215ENST00000512962 PHF5AQ7RTV0 110 aaKnown RBP7.31□□□□□ -1.24
SDHA-215ENST00000512962 CDC42SE2Q9NRR3 84 aa7.31□□□□□ -1.24
SDHA-215ENST00000512962 V9GYV3 84 aa7.31□□□□□ -1.24
SDHA-215ENST00000512962 IGHV1-58A0A0C4DH39 117 aa7.3□□□□□ -1.24
SDHA-215ENST00000512962 CCL25O15444 150 aa7.3□□□□□ -1.24
SDHA-215ENST00000512962 PPP1R17O96001 155 aa7.3□□□□□ -1.24
SDHA-215ENST00000512962 MT-ND6P03923 174 aa7.3□□□□□ -1.24
SDHA-215ENST00000512962 XCL1P47992 114 aa7.3□□□□□ -1.24
SDHA-215ENST00000512962 AKR1D1P51857 326 aa7.3□□□□□ -1.24
SDHA-215ENST00000512962 RIGQ13278 110 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms