RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 MAJINQ3KP22 176 aa15.33■□□□□ 0.04
SRPK1-210ENST00000508473 C2orf66Q6UXQ4 117 aa15.33■□□□□ 0.04
SRPK1-210ENST00000508473 CYSLTR1Q9Y271 337 aa15.33■□□□□ 0.04
SRPK1-210ENST00000508473 ORMDL2Q53FV1 153 aa15.32■□□□□ 0.04
SRPK1-210ENST00000508473 NXT2Q9NPJ8 142 aaKnown RBP15.32■□□□□ 0.04
SRPK1-210ENST00000508473 APOMO95445 188 aa15.31■□□□□ 0.04
SRPK1-210ENST00000508473 RHEBQ15382 184 aa15.31■□□□□ 0.04
SRPK1-210ENST00000508473 TMEM141Q96I45 108 aa15.31■□□□□ 0.04
SRPK1-210ENST00000508473 A0A096LNI7 61 aa15.3■□□□□ 0.04
SRPK1-210ENST00000508473 Q6ZRU5 148 aa15.3■□□□□ 0.04
SRPK1-210ENST00000508473 GNB1LQ9BYB4 327 aa15.3■□□□□ 0.04
SRPK1-210ENST00000508473 MYCBP2O75592 4640 aa15.29■□□□□ 0.04
SRPK1-210ENST00000508473 IGHV3OR16-9A0A0B4J2B5 98 aa15.29■□□□□ 0.04
SRPK1-210ENST00000508473 SPAG11BQ08648 103 aa15.29■□□□□ 0.04
SRPK1-210ENST00000508473 ZC2HC1BQ5TFG8 222 aa15.29■□□□□ 0.04
SRPK1-210ENST00000508473 CAMK2N2Q96S95 79 aa15.29■□□□□ 0.04
SRPK1-210ENST00000508473 PLAC8Q9NZF1 115 aa15.28■□□□□ 0.04
SRPK1-210ENST00000508473 K7EMI3 77 aa15.27■□□□□ 0.04
SRPK1-210ENST00000508473 TEX43Q6ZNM6 134 aa15.27■□□□□ 0.04
SRPK1-210ENST00000508473 ORAOV1Q8WV07 137 aa15.27■□□□□ 0.04
SRPK1-210ENST00000508473 LINC00242Q5T6M2 205 aa15.26■□□□□ 0.03
SRPK1-210ENST00000508473 STPG4Q8N801 248 aa15.26■□□□□ 0.03
SRPK1-210ENST00000508473 TGIF2-C20orf24A0A0A6YYL0 155 aa15.25■□□□□ 0.03
SRPK1-210ENST00000508473 APOC3P02656 99 aa15.25■□□□□ 0.03
SRPK1-210ENST00000508473 Q6ZN92 141 aa15.25■□□□□ 0.03
SRPK1-210ENST00000508473 C2orf48Q96LS8 159 aa15.25■□□□□ 0.03
SRPK1-210ENST00000508473 PKIGQ9Y2B9 76 aa15.25■□□□□ 0.03
SRPK1-210ENST00000508473 IGIPA6NJ69 53 aa15.24■□□□□ 0.03
SRPK1-210ENST00000508473 FABP9Q0Z7S8 132 aa15.24■□□□□ 0.03
SRPK1-210ENST00000508473 COX19Q49B96 90 aa15.24■□□□□ 0.03
SRPK1-210ENST00000508473 OR10D4PQ8NGN7 298 aa15.24■□□□□ 0.03
SRPK1-210ENST00000508473 C2orf88Q9BSF0 95 aa15.24■□□□□ 0.03
SRPK1-210ENST00000508473 ALKBH7Q9BT30 221 aaPredicted RBP15.24■□□□□ 0.03
SRPK1-210ENST00000508473 MRPL18Q9H0U6 180 aaKnown RBP15.24■□□□□ 0.03
SRPK1-210ENST00000508473 VCX2Q9H322 139 aa15.24■□□□□ 0.03
SRPK1-210ENST00000508473 UBE2D1P51668 147 aa15.23■□□□□ 0.03
SRPK1-210ENST00000508473 LINC00173Q6ZV60 143 aa15.23■□□□□ 0.03
SRPK1-210ENST00000508473 GAGE2BQ13066 116 aa15.22■□□□□ 0.03
SRPK1-210ENST00000508473 AMELXQ99217 191 aa15.22■□□□□ 0.03
SRPK1-210ENST00000508473 DMBT1Q9UGM3 2413 aaPredicted RBP15.21■□□□□ 0.03
SRPK1-210ENST00000508473 A0A0J9YXV3 536 aa15.21■□□□□ 0.03
SRPK1-210ENST00000508473 LOC107984640A0A0U1RRK4 108 aa15.21■□□□□ 0.03
SRPK1-210ENST00000508473 MT-ND6P03923 174 aa15.21■□□□□ 0.03
SRPK1-210ENST00000508473 HNRNPA3P51991 378 aaKnown RBP15.21■□□□□ 0.03
SRPK1-210ENST00000508473 LINC00474Q9P2X8 69 aa15.21■□□□□ 0.03
SRPK1-210ENST00000508473 A0A087WZ39 114 aa15.2■□□□□ 0.02
SRPK1-210ENST00000508473 G0S2P27469 103 aa15.2■□□□□ 0.02
SRPK1-210ENST00000508473 TOMM6Q96B49 74 aa15.2■□□□□ 0.02
SRPK1-210ENST00000508473 J3QL48 77 aa15.19■□□□□ 0.02
SRPK1-210ENST00000508473 PTTG1IPP53801 180 aa15.19■□□□□ 0.02
SRPK1-210ENST00000508473 NDUFA5Q16718 116 aa15.19■□□□□ 0.02
SRPK1-210ENST00000508473 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.18■□□□□ 0.02
SRPK1-210ENST00000508473 NPSP0C0P6 89 aa15.18■□□□□ 0.02
SRPK1-210ENST00000508473 C7orf33Q8WU49 177 aa15.18■□□□□ 0.02
SRPK1-210ENST00000508473 SNAPINO95295 136 aa15.17■□□□□ 0.02
SRPK1-210ENST00000508473 SVBPQ8N300 66 aa15.17■□□□□ 0.02
SRPK1-210ENST00000508473 SCGB3A1Q96QR1 104 aa15.17■□□□□ 0.02
SRPK1-210ENST00000508473 TIMM17AQ99595 171 aa15.17■□□□□ 0.02
SRPK1-210ENST00000508473 NDUFA1O15239 70 aa15.16■□□□□ 0.02
SRPK1-210ENST00000508473 RPL18AQ02543 176 aaKnown RBP15.16■□□□□ 0.02
SRPK1-210ENST00000508473 C10orf25Q5T742 122 aa15.16■□□□□ 0.02
SRPK1-210ENST00000508473 PAPPA-AS1Q5QFB9 102 aa15.15■□□□□ 0.02
SRPK1-210ENST00000508473 UNQ6190/PRO20217Q6UXQ8 127 aa15.15■□□□□ 0.02
SRPK1-210ENST00000508473 FA2HQ7L5A8 372 aa15.15■□□□□ 0.02
SRPK1-210ENST00000508473 MRPL35Q9NZE8 188 aaKnown RBP15.15■□□□□ 0.02
SRPK1-210ENST00000508473 TRAPPC1Q9Y5R8 145 aa15.15■□□□□ 0.02
SRPK1-210ENST00000508473 HERC1Q15751 4861 aa15.15■□□□□ 0.02
SRPK1-210ENST00000508473 LINC01546A6NGU7 62 aa15.14■□□□□ 0.01
SRPK1-210ENST00000508473 KRTAP29-1A8MX34 341 aaPredicted RBP15.14■□□□□ 0.01
SRPK1-210ENST00000508473 KIAA0087Q14695 138 aa15.14■□□□□ 0.01
SRPK1-210ENST00000508473 RNF151Q2KHN1 245 aa15.14■□□□□ 0.01
SRPK1-210ENST00000508473 ERASQ7Z444 233 aa15.14■□□□□ 0.01
SRPK1-210ENST00000508473 F8WDY8 70 aa15.13■□□□□ 0.01
SRPK1-210ENST00000508473 SMCO4Q9NRQ5 59 aa15.13■□□□□ 0.01
SRPK1-210ENST00000508473 C6orf48Q9UBA6 75 aa15.12■□□□□ 0.01
SRPK1-210ENST00000508473 PKHD1L1Q86WI1 4243 aa15.12■□□□□ 0.01
SRPK1-210ENST00000508473 A0A1W2PNN7 141 aa15.11■□□□□ 0.01
SRPK1-210ENST00000508473 C2orf82Q6UX34 121 aa15.1■□□□□ 0.01
SRPK1-210ENST00000508473 FAM19A3Q7Z5A8 133 aa15.1■□□□□ 0.01
SRPK1-210ENST00000508473 LINC01561Q8N1V8 128 aa15.1■□□□□ 0.01
SRPK1-210ENST00000508473 LRP1Q07954 4544 aaKnown RBP15.1■□□□□ 0.01
SRPK1-210ENST00000508473 GEMIN7Q9H840 131 aaKnown RBP15.09■□□□□ 0.01
SRPK1-210ENST00000508473 TOMM7Q9P0U1 55 aa15.09■□□□□ 0.01
SRPK1-210ENST00000508473 HERVK_113P63121 156 aa15.08■□□□□ 0
SRPK1-210ENST00000508473 C9orf116Q5BN46 136 aaPredicted RBP15.08■□□□□ 0
SRPK1-210ENST00000508473 CDKN2A-AS1Q9UH64 79 aa15.08■□□□□ 0
SRPK1-210ENST00000508473 SEC11AP67812 179 aa15.07■□□□□ 0
SRPK1-210ENST00000508473 LINC01549A6NIU2 74 aa15.06■□□□□ 0
SRPK1-210ENST00000508473 PRSS2P07478 247 aa15.06■□□□□ 0
SRPK1-210ENST00000508473 PRR3P79522 188 aaKnown RBP15.06■□□□□ 0
SRPK1-210ENST00000508473 C18orf32Q8TCD1 76 aa15.06■□□□□ 0
SRPK1-210ENST00000508473 FAT3Q8TDW7 4589 aa15.05■□□□□ 0
SRPK1-210ENST00000508473 OXTP01178 125 aa15.05■□□□□ -0
SRPK1-210ENST00000508473 Q6ZRP5 223 aa15.05■□□□□ -0
SRPK1-210ENST00000508473 URB1-AS1Q96HZ7 61 aa15.05■□□□□ -0
SRPK1-210ENST00000508473 PACRGQ96M98 296 aaPredicted RBP15.05■□□□□ -0
SRPK1-210ENST00000508473 GAGE2EQ4V326 116 aa15.04■□□□□ -0
SRPK1-210ENST00000508473 CST9LQ9H4G1 147 aa15.04■□□□□ -0
SRPK1-210ENST00000508473 GAGE2DQ9UEU5 116 aa15.04■□□□□ -0
SRPK1-210ENST00000508473 TLX1NBP0CAT3 122 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms