RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 RAB5BP61020 215 aa12.87□□□□□ -0.35
SNX25-204ENST00000506896 LINC01620Q4KN68 170 aa12.87□□□□□ -0.35
SNX25-204ENST00000506896 HIGD2BQ4VC39 106 aa12.87□□□□□ -0.35
SNX25-204ENST00000506896 Q6ZSA8 131 aa12.87□□□□□ -0.35
SNX25-204ENST00000506896 ERASQ7Z444 233 aa12.87□□□□□ -0.35
SNX25-204ENST00000506896 AMELXQ99217 191 aa12.87□□□□□ -0.35
SNX25-204ENST00000506896 APOMO95445 188 aa12.86□□□□□ -0.35
SNX25-204ENST00000506896 SCGB3A1Q96QR1 104 aa12.86□□□□□ -0.35
SNX25-204ENST00000506896 IGHV3OR16-9A0A0B4J2B5 98 aa12.85□□□□□ -0.35
SNX25-204ENST00000506896 LINC00614P0C842 121 aa12.85□□□□□ -0.35
SNX25-204ENST00000506896 ZNF561-AS1K7EIQ3 104 aa12.84□□□□□ -0.35
SNX25-204ENST00000506896 UBE2D1P51668 147 aa12.84□□□□□ -0.35
SNX25-204ENST00000506896 LINC00173Q6ZV60 143 aa12.84□□□□□ -0.35
SNX25-204ENST00000506896 C5orf38Q86SI9 138 aa12.84□□□□□ -0.35
SNX25-204ENST00000506896 FAM30AQ9NZY2 134 aa12.84□□□□□ -0.35
SNX25-204ENST00000506896 SLPIP03973 132 aa12.83□□□□□ -0.36
SNX25-204ENST00000506896 LINC00242Q5T6M2 205 aa12.83□□□□□ -0.36
SNX25-204ENST00000506896 IGHV3-64A0A075B6Q5 118 aa12.82□□□□□ -0.36
SNX25-204ENST00000506896 URB1-AS1Q96HZ7 61 aa12.82□□□□□ -0.36
SNX25-204ENST00000506896 SEC11AP67812 179 aa12.81□□□□□ -0.36
SNX25-204ENST00000506896 OR10D4PQ8NGN7 298 aa12.81□□□□□ -0.36
SNX25-204ENST00000506896 EPM2AB3EWF7 344 aa12.8□□□□□ -0.36
SNX25-204ENST00000506896 SDIM1Q6ZPB5 146 aa12.8□□□□□ -0.36
SNX25-204ENST00000506896 FAM19A3Q7Z5A8 133 aa12.8□□□□□ -0.36
SNX25-204ENST00000506896 A0A087WZ39 114 aa12.79□□□□□ -0.36
SNX25-204ENST00000506896 COLCA2A8K830 154 aa12.79□□□□□ -0.36
SNX25-204ENST00000506896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.79□□□□□ -0.36
SNX25-204ENST00000506896 HBDP02042 147 aa12.79□□□□□ -0.36
SNX25-204ENST00000506896 TRGC2P03986 189 aa12.79□□□□□ -0.36
SNX25-204ENST00000506896 ZC2HC1BQ5TFG8 222 aa12.79□□□□□ -0.36
SNX25-204ENST00000506896 CHCHD1Q96BP2 118 aaKnown RBP12.79□□□□□ -0.36
SNX25-204ENST00000506896 SMR3BP02814 79 aaPredicted RBP12.78□□□□□ -0.36
SNX25-204ENST00000506896 HAMPP81172 84 aa12.78□□□□□ -0.36
SNX25-204ENST00000506896 LINC01561Q8N1V8 128 aa12.78□□□□□ -0.36
SNX25-204ENST00000506896 C2orf48Q96LS8 159 aa12.78□□□□□ -0.36
SNX25-204ENST00000506896 CHAC1Q9BUX1 264 aa12.78□□□□□ -0.36
SNX25-204ENST00000506896 PKIGQ9Y2B9 76 aa12.78□□□□□ -0.36
SNX25-204ENST00000506896 IGLV4-69A0A075B6H9 119 aa12.77□□□□□ -0.37
SNX25-204ENST00000506896 A0A096LNJ9 63 aa12.77□□□□□ -0.37
SNX25-204ENST00000506896 HERVK_113P63121 156 aa12.77□□□□□ -0.37
SNX25-204ENST00000506896 COX6A2Q02221 97 aa12.77□□□□□ -0.37
SNX25-204ENST00000506896 SYCNQ0VAF6 134 aa12.77□□□□□ -0.37
SNX25-204ENST00000506896 ORAOV1Q8WV07 137 aa12.77□□□□□ -0.37
SNX25-204ENST00000506896 LINC00526Q96FQ7 95 aa12.77□□□□□ -0.37
SNX25-204ENST00000506896 CARD19Q96LW7 228 aa12.77□□□□□ -0.37
SNX25-204ENST00000506896 SPAG11BQ08648 103 aa12.76□□□□□ -0.37
SNX25-204ENST00000506896 F8WDY8 70 aa12.75□□□□□ -0.37
SNX25-204ENST00000506896 PMVKQ15126 192 aa12.75□□□□□ -0.37
SNX25-204ENST00000506896 Q5VSD8 79 aa12.75□□□□□ -0.37
SNX25-204ENST00000506896 CST9LQ9H4G1 147 aa12.75□□□□□ -0.37
SNX25-204ENST00000506896 GEMIN7Q9H840 131 aaKnown RBP12.75□□□□□ -0.37
SNX25-204ENST00000506896 SRRM2Q9UQ35 2752 aaKnown RBP12.75□□□□□ -0.37
SNX25-204ENST00000506896 SCXQ7RTU7 201 aa12.74□□□□□ -0.37
SNX25-204ENST00000506896 BAGE3Q86Y29 109 aa12.74□□□□□ -0.37
SNX25-204ENST00000506896 CAMK2N2Q96S95 79 aa12.74□□□□□ -0.37
SNX25-204ENST00000506896 ATP5LO75964 103 aa12.73□□□□□ -0.37
SNX25-204ENST00000506896 PMCHL1Q16048 86 aa12.73□□□□□ -0.37
SNX25-204ENST00000506896 PDZD11Q5EBL8 140 aa12.73□□□□□ -0.37
SNX25-204ENST00000506896 TINCRA0A1B0GVN0 87 aa12.72□□□□□ -0.37
SNX25-204ENST00000506896 CIRBPQ14011 172 aaKnown RBP12.72□□□□□ -0.37
SNX25-204ENST00000506896 CIRBP-AS1Q8TBR5 109 aa12.72□□□□□ -0.37
SNX25-204ENST00000506896 SCO1O75880 301 aa12.71□□□□□ -0.37
SNX25-204ENST00000506896 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.71□□□□□ -0.37
SNX25-204ENST00000506896 A0A0J9YXV3 536 aa12.7□□□□□ -0.38
SNX25-204ENST00000506896 HSBP1O75506 76 aa12.7□□□□□ -0.38
SNX25-204ENST00000506896 Q6ZRU5 148 aa12.7□□□□□ -0.38
SNX25-204ENST00000506896 CDKN2A-AS1Q9UH64 79 aa12.7□□□□□ -0.38
SNX25-204ENST00000506896 FAM229AH3BQW9 127 aa12.69□□□□□ -0.38
SNX25-204ENST00000506896 NDUFA1O15239 70 aa12.69□□□□□ -0.38
SNX25-204ENST00000506896 RNF151Q2KHN1 245 aa12.69□□□□□ -0.38
SNX25-204ENST00000506896 PACRGQ96M98 296 aaPredicted RBP12.69□□□□□ -0.38
SNX25-204ENST00000506896 LINC00474Q9P2X8 69 aa12.69□□□□□ -0.38
SNX25-204ENST00000506896 LINC00469Q8N7U9 141 aa12.68□□□□□ -0.38
SNX25-204ENST00000506896 SPACA4Q8TDM5 124 aa12.68□□□□□ -0.38
SNX25-204ENST00000506896 MRPL35Q9NZE8 188 aaKnown RBP12.68□□□□□ -0.38
SNX25-204ENST00000506896 IGLV5-45A0A087WSX0 123 aa12.67□□□□□ -0.38
SNX25-204ENST00000506896 PANO1I0J062 215 aa12.67□□□□□ -0.38
SNX25-204ENST00000506896 INAFM2P0DMQ5 153 aa12.67□□□□□ -0.38
SNX25-204ENST00000506896 NDUFA6P56556 154 aa12.67□□□□□ -0.38
SNX25-204ENST00000506896 KIAA0087Q14695 138 aa12.67□□□□□ -0.38
SNX25-204ENST00000506896 DPH3Q96FX2 82 aa12.67□□□□□ -0.38
SNX25-204ENST00000506896 LOC107984640A0A0U1RRK4 108 aa12.66□□□□□ -0.38
SNX25-204ENST00000506896 PRSS2P07478 247 aa12.66□□□□□ -0.38
SNX25-204ENST00000506896 CHTF8P0CG12 524 aa12.65□□□□□ -0.38
SNX25-204ENST00000506896 Q8IZM0 81 aa12.65□□□□□ -0.38
SNX25-204ENST00000506896 MYCBP2O75592 4640 aa12.64□□□□□ -0.39
SNX25-204ENST00000506896 A0A096LNI7 61 aa12.64□□□□□ -0.39
SNX25-204ENST00000506896 IGKV2-24A0A0C4DH68 120 aa12.64□□□□□ -0.39
SNX25-204ENST00000506896 SERF1AO75920 110 aa12.64□□□□□ -0.39
SNX25-204ENST00000506896 IGLC3P0DOY3 106 aa12.64□□□□□ -0.39
SNX25-204ENST00000506896 S100A1P23297 94 aa12.64□□□□□ -0.39
SNX25-204ENST00000506896 H3BRM9 83 aa12.63□□□□□ -0.39
SNX25-204ENST00000506896 MAJINQ3KP22 176 aa12.63□□□□□ -0.39
SNX25-204ENST00000506896 LINC00528Q8N1L1 170 aa12.63□□□□□ -0.39
SNX25-204ENST00000506896 IFI27L1Q96BM0 104 aa12.63□□□□□ -0.39
SNX25-204ENST00000506896 FLG2Q5D862 2391 aaPredicted RBP12.62□□□□□ -0.39
SNX25-204ENST00000506896 A0A087WYN8 130 aa12.62□□□□□ -0.39
SNX25-204ENST00000506896 TRBV30A0A0K0K1B3 111 aa12.62□□□□□ -0.39
SNX25-204ENST00000506896 CKS1BP61024 79 aa12.62□□□□□ -0.39
SNX25-204ENST00000506896 C6orf226Q5I0X4 101 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms