RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 MAP1LC3CQ9BXW4 147 aa13.4□□□□□ -0.26
SMIM20-201ENST00000506197 GAGE12HA6NDE8 117 aa13.38□□□□□ -0.27
SMIM20-201ENST00000506197 C5orf52A6NGY3 159 aa13.38□□□□□ -0.27
SMIM20-201ENST00000506197 H0Y8G0 127 aa13.38□□□□□ -0.27
SMIM20-201ENST00000506197 TRAV12-1A0A0B4J245 112 aa13.37□□□□□ -0.27
SMIM20-201ENST00000506197 SEC11AP67812 179 aa13.37□□□□□ -0.27
SMIM20-201ENST00000506197 CD164L2Q6UWJ8 174 aa13.36□□□□□ -0.27
SMIM20-201ENST00000506197 Q6ZRN7 208 aaPredicted RBP13.36□□□□□ -0.27
SMIM20-201ENST00000506197 LINC00242Q5T6M2 205 aa13.35□□□□□ -0.27
SMIM20-201ENST00000506197 GEMIN7Q9H840 131 aaKnown RBP13.35□□□□□ -0.27
SMIM20-201ENST00000506197 CHTOPQ9Y3Y2 248 aaKnown RBP13.35□□□□□ -0.27
SMIM20-201ENST00000506197 A0A0J9YXV3 536 aa13.34□□□□□ -0.27
SMIM20-201ENST00000506197 HERVK_113P63121 156 aa13.34□□□□□ -0.27
SMIM20-201ENST00000506197 FOXI1Q12951 378 aa13.34□□□□□ -0.27
SMIM20-201ENST00000506197 KRTAP26-1Q6PEX3 210 aa13.34□□□□□ -0.27
SMIM20-201ENST00000506197 FAM19A3Q7Z5A8 133 aa13.34□□□□□ -0.27
SMIM20-201ENST00000506197 HIST1H2BLQ99880 126 aa13.34□□□□□ -0.27
SMIM20-201ENST00000506197 TINCRA0A1B0GVN0 87 aa13.33□□□□□ -0.28
SMIM20-201ENST00000506197 KRTDAPP60985 99 aa13.33□□□□□ -0.28
SMIM20-201ENST00000506197 COX7A2LO14548 114 aa13.32□□□□□ -0.28
SMIM20-201ENST00000506197 PCLOQ9Y6V0 5065 aa13.31□□□□□ -0.28
SMIM20-201ENST00000506197 F8VRH5 84 aa13.31□□□□□ -0.28
SMIM20-201ENST00000506197 SYS1-DBNDD2H3BUS1 97 aa13.31□□□□□ -0.28
SMIM20-201ENST00000506197 IGLC3P0DOY3 106 aa13.31□□□□□ -0.28
SMIM20-201ENST00000506197 COX6A2Q02221 97 aa13.31□□□□□ -0.28
SMIM20-201ENST00000506197 CHAC1Q9BUX1 264 aa13.31□□□□□ -0.28
SMIM20-201ENST00000506197 IGHV3OR16-9A0A0B4J2B5 98 aa13.3□□□□□ -0.28
SMIM20-201ENST00000506197 C3orf79P0CE67 100 aa13.3□□□□□ -0.28
SMIM20-201ENST00000506197 MALP21145 153 aa13.3□□□□□ -0.28
SMIM20-201ENST00000506197 ODF1Q14990 250 aa13.3□□□□□ -0.28
SMIM20-201ENST00000506197 C5orf38Q86SI9 138 aa13.3□□□□□ -0.28
SMIM20-201ENST00000506197 LINC00469Q8N7U9 141 aa13.3□□□□□ -0.28
SMIM20-201ENST00000506197 MRPL35Q9NZE8 188 aaKnown RBP13.3□□□□□ -0.28
SMIM20-201ENST00000506197 IGLV4-69A0A075B6H9 119 aa13.29□□□□□ -0.28
SMIM20-201ENST00000506197 PET117Q6UWS5 81 aa13.29□□□□□ -0.28
SMIM20-201ENST00000506197 MAPKAPK5-AS1Q8N8E1 139 aa13.29□□□□□ -0.28
SMIM20-201ENST00000506197 KRTAP17-1Q9BYP8 105 aa13.29□□□□□ -0.28
SMIM20-201ENST00000506197 SPATA12Q7Z6I5 190 aa13.28□□□□□ -0.28
SMIM20-201ENST00000506197 LECT2O14960 151 aa13.27□□□□□ -0.29
SMIM20-201ENST00000506197 APOMO95445 188 aa13.27□□□□□ -0.29
SMIM20-201ENST00000506197 CFAP161Q6P656 301 aa13.27□□□□□ -0.29
SMIM20-201ENST00000506197 CDKN2A-AS1Q9UH64 79 aa13.27□□□□□ -0.29
SMIM20-201ENST00000506197 A0A087WZ39 114 aa13.26□□□□□ -0.29
SMIM20-201ENST00000506197 C20orf202A1L168 122 aa13.26□□□□□ -0.29
SMIM20-201ENST00000506197 C11orf86A6NJI1 115 aa13.26□□□□□ -0.29
SMIM20-201ENST00000506197 USP17L23D6RBM5 183 aa13.26□□□□□ -0.29
SMIM20-201ENST00000506197 H3BRM9 83 aa13.26□□□□□ -0.29
SMIM20-201ENST00000506197 EREGO14944 169 aa13.26□□□□□ -0.29
SMIM20-201ENST00000506197 PLNP26678 52 aa13.26□□□□□ -0.29
SMIM20-201ENST00000506197 TNP2Q05952 138 aa13.26□□□□□ -0.29
SMIM20-201ENST00000506197 IGLV5-45A0A087WSX0 123 aa13.25□□□□□ -0.29
SMIM20-201ENST00000506197 IGHV1-58A0A0C4DH39 117 aa13.25□□□□□ -0.29
SMIM20-201ENST00000506197 DPM2O94777 84 aa13.25□□□□□ -0.29
SMIM20-201ENST00000506197 C14orf177Q52M58 125 aa13.25□□□□□ -0.29
SMIM20-201ENST00000506197 TMEM170BQ5T4T1 132 aa13.25□□□□□ -0.29
SMIM20-201ENST00000506197 PMCHL2Q9BQD1 86 aa13.25□□□□□ -0.29
SMIM20-201ENST00000506197 RYR1P21817 5038 aa13.25□□□□□ -0.29
SMIM20-201ENST00000506197 LRCOL1A6NCL2 159 aa13.24□□□□□ -0.29
SMIM20-201ENST00000506197 ZNF22P17026 224 aaPredicted RBP13.24□□□□□ -0.29
SMIM20-201ENST00000506197 LINC01545Q5VT33 79 aa13.24□□□□□ -0.29
SMIM20-201ENST00000506197 LINC01561Q8N1V8 128 aa13.24□□□□□ -0.29
SMIM20-201ENST00000506197 A0A087WTM6 91 aa13.23□□□□□ -0.29
SMIM20-201ENST00000506197 IGKCP01834 107 aa13.23□□□□□ -0.29
SMIM20-201ENST00000506197 OR10D4PQ8NGN7 298 aa13.23□□□□□ -0.29
SMIM20-201ENST00000506197 WFDC2Q14508 124 aa13.22□□□□□ -0.29
SMIM20-201ENST00000506197 C15orf56Q8N910 161 aa13.22□□□□□ -0.29
SMIM20-201ENST00000506197 ORAOV1Q8WV07 137 aa13.21□□□□□ -0.29
SMIM20-201ENST00000506197 LRP1BQ9NZR2 4599 aa13.2□□□□□ -0.3
SMIM20-201ENST00000506197 HSPG2P98160 4391 aa13.2□□□□□ -0.3
SMIM20-201ENST00000506197 IGHV3-64A0A075B6Q5 118 aa13.2□□□□□ -0.3
SMIM20-201ENST00000506197 hDV102S1A0JD36 115 aa13.2□□□□□ -0.3
SMIM20-201ENST00000506197 SPINK8P0C7L1 97 aa13.2□□□□□ -0.3
SMIM20-201ENST00000506197 AKR1D1P51857 326 aa13.2□□□□□ -0.3
SMIM20-201ENST00000506197 HIGD2BQ4VC39 106 aa13.2□□□□□ -0.3
SMIM20-201ENST00000506197 GVQW2A0A096LPI5 108 aaPredicted RBP13.19□□□□□ -0.3
SMIM20-201ENST00000506197 Q8N814 137 aa13.19□□□□□ -0.3
SMIM20-201ENST00000506197 C16orf90A8MZG2 172 aa13.18□□□□□ -0.3
SMIM20-201ENST00000506197 SMIM1B2RUZ4 78 aa13.18□□□□□ -0.3
SMIM20-201ENST00000506197 ZNF561-AS1K7EIQ3 104 aa13.18□□□□□ -0.3
SMIM20-201ENST00000506197 SPAG11BQ08648 103 aa13.18□□□□□ -0.3
SMIM20-201ENST00000506197 PRSS2P07478 247 aa13.17□□□□□ -0.3
SMIM20-201ENST00000506197 TOMM7Q9P0U1 55 aa13.17□□□□□ -0.3
SMIM20-201ENST00000506197 HERVK_113P61574 105 aa13.16□□□□□ -0.3
SMIM20-201ENST00000506197 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.15□□□□□ -0.3
SMIM20-201ENST00000506197 TMEM223A0PJW6 202 aa13.15□□□□□ -0.3
SMIM20-201ENST00000506197 SCGB1D1O95968 90 aa13.15□□□□□ -0.3
SMIM20-201ENST00000506197 Q8IZM0 81 aa13.13□□□□□ -0.31
SMIM20-201ENST00000506197 COX7B2Q8TF08 81 aa13.13□□□□□ -0.31
SMIM20-201ENST00000506197 LINC00526Q96FQ7 95 aa13.13□□□□□ -0.31
SMIM20-201ENST00000506197 IGLV5-39A0A0G2JS06 123 aa13.12□□□□□ -0.31
SMIM20-201ENST00000506197 C6orf226Q5I0X4 101 aa13.12□□□□□ -0.31
SMIM20-201ENST00000506197 ATOH7Q8N100 152 aa13.12□□□□□ -0.31
SMIM20-201ENST00000506197 ABCA13Q86UQ4 5058 aa13.12□□□□□ -0.31
SMIM20-201ENST00000506197 NTN5Q8WTR8 489 aaPredicted RBP13.11□□□□□ -0.31
SMIM20-201ENST00000506197 C2orf48Q96LS8 159 aa13.11□□□□□ -0.31
SMIM20-201ENST00000506197 CAMK2N2Q96S95 79 aa13.11□□□□□ -0.31
SMIM20-201ENST00000506197 DNAH5Q8TE73 4624 aa13.11□□□□□ -0.31
SMIM20-201ENST00000506197 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.1□□□□□ -0.31
SMIM20-201ENST00000506197 F8WDY8 70 aa13.1□□□□□ -0.31
SMIM20-201ENST00000506197 CKS1BP61024 79 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 215.6 ms