RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 LINC01561Q8N1V8 128 aa8.22□□□□□ -1.09
POLR2J3-211ENST00000506060 STAB2Q8WWQ8 2551 aa8.22□□□□□ -1.09
POLR2J3-211ENST00000506060 M0R143 59 aa8.21□□□□□ -1.1
POLR2J3-211ENST00000506060 IGHV3-30P01768 117 aa8.21□□□□□ -1.1
POLR2J3-211ENST00000506060 IGHV3-33P01772 117 aa8.21□□□□□ -1.1
POLR2J3-211ENST00000506060 IGHV3-30-5P0DP03 117 aa8.21□□□□□ -1.1
POLR2J3-211ENST00000506060 CD164L2Q6UWJ8 174 aa8.21□□□□□ -1.1
POLR2J3-211ENST00000506060 WFDC10BQ8IUB3 73 aa8.21□□□□□ -1.1
POLR2J3-211ENST00000506060 PRR34Q9NV39 138 aa8.21□□□□□ -1.1
POLR2J3-211ENST00000506060 KLK12Q9UKR0 248 aa8.21□□□□□ -1.1
POLR2J3-211ENST00000506060 IGHV3-64A0A075B6Q5 118 aa8.2□□□□□ -1.1
POLR2J3-211ENST00000506060 A0A087WZ39 114 aa8.2□□□□□ -1.1
POLR2J3-211ENST00000506060 IGHV3OR16-9A0A0B4J2B5 98 aa8.2□□□□□ -1.1
POLR2J3-211ENST00000506060 MIAQ16674 131 aa8.2□□□□□ -1.1
POLR2J3-211ENST00000506060 CLPSL2Q6UWE3 100 aa8.2□□□□□ -1.1
POLR2J3-211ENST00000506060 TRAV8-3A0A0A6YYJ7 113 aa8.19□□□□□ -1.1
POLR2J3-211ENST00000506060 IGLV5-39A0A0G2JS06 123 aa8.19□□□□□ -1.1
POLR2J3-211ENST00000506060 SMIM1B2RUZ4 78 aa8.19□□□□□ -1.1
POLR2J3-211ENST00000506060 K7EP13 123 aa8.19□□□□□ -1.1
POLR2J3-211ENST00000506060 COX7A2LO14548 114 aa8.19□□□□□ -1.1
POLR2J3-211ENST00000506060 DNAH10OSP0CZ25 163 aa8.19□□□□□ -1.1
POLR2J3-211ENST00000506060 XCL1P47992 114 aa8.19□□□□□ -1.1
POLR2J3-211ENST00000506060 HSD52Q0P140 79 aa8.19□□□□□ -1.1
POLR2J3-211ENST00000506060 SFTA2Q6UW10 78 aa8.19□□□□□ -1.1
POLR2J3-211ENST00000506060 C10orf126Q8N4M7 172 aa8.19□□□□□ -1.1
POLR2J3-211ENST00000506060 CHCHD10Q8WYQ3 142 aaPredicted RBP8.19□□□□□ -1.1
POLR2J3-211ENST00000506060 UBE2WQ96B02 151 aa8.19□□□□□ -1.1
POLR2J3-211ENST00000506060 UPK3BQ9BT76 320 aa8.19□□□□□ -1.1
POLR2J3-211ENST00000506060 NDUFA12Q9UI09 145 aa8.19□□□□□ -1.1
POLR2J3-211ENST00000506060 APOMO95445 188 aa8.18□□□□□ -1.1
POLR2J3-211ENST00000506060 MALP21145 153 aa8.18□□□□□ -1.1
POLR2J3-211ENST00000506060 TAL2Q16559 108 aa8.18□□□□□ -1.1
POLR2J3-211ENST00000506060 ZFAND6Q6FIF0 208 aa8.18□□□□□ -1.1
POLR2J3-211ENST00000506060 C2orf91Q6ZV80 131 aa8.18□□□□□ -1.1
POLR2J3-211ENST00000506060 UBE2DNLQ8IWF7 75 aa8.18□□□□□ -1.1
POLR2J3-211ENST00000506060 MAPKAPK5-AS1Q8N8E1 139 aa8.18□□□□□ -1.1
POLR2J3-211ENST00000506060 TTTY13Q9BZ97 58 aa8.18□□□□□ -1.1
POLR2J3-211ENST00000506060 LINC00588Q9Y4M8 146 aa8.18□□□□□ -1.1
POLR2J3-211ENST00000506060 PRSS2P07478 247 aa8.17□□□□□ -1.1
POLR2J3-211ENST00000506060 HERV-K104P63124 156 aa8.17□□□□□ -1.1
POLR2J3-211ENST00000506060 LBHQ53QV2 105 aaPredicted RBP8.17□□□□□ -1.1
POLR2J3-211ENST00000506060 C5orf38Q86SI9 138 aa8.17□□□□□ -1.1
POLR2J3-211ENST00000506060 COX7B2Q8TF08 81 aa8.17□□□□□ -1.1
POLR2J3-211ENST00000506060 TMEM238C9JI98 176 aa8.16□□□□□ -1.1
POLR2J3-211ENST00000506060 NDUFA1O15239 70 aa8.16□□□□□ -1.1
POLR2J3-211ENST00000506060 TSPEAR-AS2P59090 65 aa8.16□□□□□ -1.1
POLR2J3-211ENST00000506060 CIRBPQ14011 172 aaKnown RBP8.16□□□□□ -1.1
POLR2J3-211ENST00000506060 Q8N3U1 123 aa8.16□□□□□ -1.1
POLR2J3-211ENST00000506060 RMI2Q96E14 147 aa8.16□□□□□ -1.1
POLR2J3-211ENST00000506060 HIST1H4GQ99525 98 aa8.16□□□□□ -1.1
POLR2J3-211ENST00000506060 APLNQ9ULZ1 77 aa8.16□□□□□ -1.1
POLR2J3-211ENST00000506060 IGLV10-54A0A075B6I4 117 aa8.15□□□□□ -1.1
POLR2J3-211ENST00000506060 GAGE12HA6NDE8 117 aa8.15□□□□□ -1.1
POLR2J3-211ENST00000506060 SRSF9Q13242 221 aaKnown RBP eCLIP8.15□□□□□ -1.1
POLR2J3-211ENST00000506060 ENHOQ6UWT2 76 aa8.15□□□□□ -1.1
POLR2J3-211ENST00000506060 C1orf43Q9BWL3 253 aa8.15□□□□□ -1.1
POLR2J3-211ENST00000506060 COL7A1Q02388 2944 aa8.14□□□□□ -1.11
POLR2J3-211ENST00000506060 GCSHP23434 173 aa8.14□□□□□ -1.11
POLR2J3-211ENST00000506060 CXCL5P42830 114 aa8.14□□□□□ -1.11
POLR2J3-211ENST00000506060 HINT1P49773 126 aaPredicted RBP8.14□□□□□ -1.11
POLR2J3-211ENST00000506060 BATFQ16520 125 aa8.14□□□□□ -1.11
POLR2J3-211ENST00000506060 C6orf226Q5I0X4 101 aa8.14□□□□□ -1.11
POLR2J3-211ENST00000506060 CFAP161Q6P656 301 aa8.14□□□□□ -1.11
POLR2J3-211ENST00000506060 SPANXB1Q9NS25 103 aaPredicted RBP8.14□□□□□ -1.11
POLR2J3-211ENST00000506060 TOMM7Q9P0U1 55 aa8.14□□□□□ -1.11
POLR2J3-211ENST00000506060 TP73-AS1Q9UF72 201 aa8.14□□□□□ -1.11
POLR2J3-211ENST00000506060 TIMM17BO60830 172 aa8.13□□□□□ -1.11
POLR2J3-211ENST00000506060 FOXI1Q12951 378 aa8.13□□□□□ -1.11
POLR2J3-211ENST00000506060 Q6ZVH6 145 aa8.13□□□□□ -1.11
POLR2J3-211ENST00000506060 Q8IZM0 81 aa8.13□□□□□ -1.11
POLR2J3-211ENST00000506060 COPS9Q8WXC6 57 aa8.13□□□□□ -1.11
POLR2J3-211ENST00000506060 Q9H8V8 135 aa8.13□□□□□ -1.11
POLR2J3-211ENST00000506060 MEGF8Q7Z7M0 2845 aa8.13□□□□□ -1.11
POLR2J3-211ENST00000506060 HUWE1Q7Z6Z7 4374 aaKnown RBP8.12□□□□□ -1.11
POLR2J3-211ENST00000506060 A0A0J9YXY3 114 aa8.12□□□□□ -1.11
POLR2J3-211ENST00000506060 TMEM238LA0A1B0GVL6 79 aa8.12□□□□□ -1.11
POLR2J3-211ENST00000506060 A6NDN8 102 aa8.12□□□□□ -1.11
POLR2J3-211ENST00000506060 A6NJY4 79 aa8.12□□□□□ -1.11
POLR2J3-211ENST00000506060 IBA57-AS1B1ANH7 110 aa8.12□□□□□ -1.11
POLR2J3-211ENST00000506060 COL5A1-AS1Q5SY13 56 aa8.12□□□□□ -1.11
POLR2J3-211ENST00000506060 ORAOV1Q8WV07 137 aa8.12□□□□□ -1.11
POLR2J3-211ENST00000506060 SNHG12Q9BXW3 62 aa8.12□□□□□ -1.11
POLR2J3-211ENST00000506060 COX11Q9Y6N1 276 aa8.12□□□□□ -1.11
POLR2J3-211ENST00000506060 PTTG1IPP53801 180 aa8.11□□□□□ -1.11
POLR2J3-211ENST00000506060 CKS1BP61024 79 aa8.11□□□□□ -1.11
POLR2J3-211ENST00000506060 BVES-AS1Q5T3Y7 98 aa8.11□□□□□ -1.11
POLR2J3-211ENST00000506060 CEND1Q8N111 149 aa8.11□□□□□ -1.11
POLR2J3-211ENST00000506060 IGKV2D-24A0A075B6R9 120 aa8.1□□□□□ -1.11
POLR2J3-211ENST00000506060 TTC32Q5I0X7 151 aa8.1□□□□□ -1.11
POLR2J3-211ENST00000506060 MEIG1Q5JSS6 88 aa8.1□□□□□ -1.11
POLR2J3-211ENST00000506060 ZNF625Q96I27 306 aaPredicted RBP8.1□□□□□ -1.11
POLR2J3-211ENST00000506060 DNHD1Q96M86 4753 aa8.1□□□□□ -1.11
POLR2J3-211ENST00000506060 EREGO14944 169 aa8.09□□□□□ -1.11
POLR2J3-211ENST00000506060 MUC7Q8TAX7 377 aa8.09□□□□□ -1.11
POLR2J3-211ENST00000506060 TM2D2Q9BX73 214 aa8.09□□□□□ -1.11
POLR2J3-211ENST00000506060 DNAH9Q9NYC9 4486 aa8.08□□□□□ -1.12
POLR2J3-211ENST00000506060 F8WDY8 70 aa8.08□□□□□ -1.12
POLR2J3-211ENST00000506060 IFITM1P13164 125 aa8.08□□□□□ -1.12
POLR2J3-211ENST00000506060 RPL24P83731 157 aaKnown RBP8.08□□□□□ -1.12
POLR2J3-211ENST00000506060 SPAG11BQ08648 103 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms