RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 JMJD1CQ15652 2540 aa1.44□□□□□ -2.18
TRAPPC13-208ENST00000505553 MED13LQ71F56 2210 aa1.44□□□□□ -2.18
TRAPPC13-208ENST00000505553 PDZD2O15018 2839 aa1.43□□□□□ -2.18
TRAPPC13-208ENST00000505553 CSPG4Q6UVK1 2322 aa1.43□□□□□ -2.18
TRAPPC13-208ENST00000505553 EXPH5Q8NEV8 1989 aa1.43□□□□□ -2.18
TRAPPC13-208ENST00000505553 APOC1P02654 83 aa1.43□□□□□ -2.18
TRAPPC13-208ENST00000505553 LYNX1P0DP58 116 aa1.43□□□□□ -2.18
TRAPPC13-208ENST00000505553 DEFB109BQ30KR1 87 aa1.43□□□□□ -2.18
TRAPPC13-208ENST00000505553 Q6ZSA8 131 aa1.43□□□□□ -2.18
TRAPPC13-208ENST00000505553 COPS9Q8WXC6 57 aa1.43□□□□□ -2.18
TRAPPC13-208ENST00000505553 ATG5Q9H1Y0 275 aa1.43□□□□□ -2.18
TRAPPC13-208ENST00000505553 MRPL36Q9P0J6 103 aaKnown RBP1.43□□□□□ -2.18
TRAPPC13-208ENST00000505553 C22orf24Q9Y442 160 aa1.43□□□□□ -2.18
TRAPPC13-208ENST00000505553 ATMQ13315 3056 aa1.43□□□□□ -2.18
TRAPPC13-208ENST00000505553 TRBV10-1A0A0K0K1A3 114 aa1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 ATP6V1G2-DDX39BF2Z307 99 aa1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 CCDC179H3BU77 68 aa1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 IGKCP01834 107 aa1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 RPL37AP61513 92 aaKnown RBP1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 MIC13Q5XKP0 118 aa1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 MYH6P13533 1939 aa1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 HELZP42694 1942 aaKnown RBP1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 NOTCH1P46531 2555 aa1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 ARFGEF3Q5TH69 2177 aa1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 MED13Q9UHV7 2174 aa1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 COL6A5A8TX70 2615 aa1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 NIPBLQ6KC79 2804 aaeCLIP1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 HEATR1Q9H583 2144 aaKnown RBP1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 LAMA1P25391 3075 aa1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 ADGRG4Q8IZF6 3080 aa1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 INTS1Q8N201 2190 aaKnown RBP1.42□□□□□ -2.18
TRAPPC13-208ENST00000505553 TRAV12-2A0A075B6T6 113 aa1.41□□□□□ -2.18
TRAPPC13-208ENST00000505553 MIF4GDA9UHW6 222 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-208ENST00000505553 DLEU1O43261 78 aa1.41□□□□□ -2.18
TRAPPC13-208ENST00000505553 SBSPONQ8IVN8 264 aa1.41□□□□□ -2.18
TRAPPC13-208ENST00000505553 AMELYQ99218 206 aa1.41□□□□□ -2.18
TRAPPC13-208ENST00000505553 MRPL35Q9NZE8 188 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-208ENST00000505553 FBN1P35555 2871 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-208ENST00000505553 SPENQ96T58 3664 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-208ENST00000505553 ANK1P16157 1881 aa1.41□□□□□ -2.18
TRAPPC13-208ENST00000505553 KNL1Q8NG31 2342 aa1.41□□□□□ -2.18
TRAPPC13-208ENST00000505553 ESPL1Q14674 2120 aa1.41□□□□□ -2.18
TRAPPC13-208ENST00000505553 APCP25054 2843 aa1.41□□□□□ -2.18
TRAPPC13-208ENST00000505553 A0A0D9SFI3 127 aa1.4□□□□□ -2.18
TRAPPC13-208ENST00000505553 HIGD1CA8MV81 97 aa1.4□□□□□ -2.18
TRAPPC13-208ENST00000505553 NCR3O14931 201 aa1.4□□□□□ -2.18
TRAPPC13-208ENST00000505553 ARL14EPLP0DKL9 152 aa1.4□□□□□ -2.18
TRAPPC13-208ENST00000505553 HMGA1P17096 107 aaKnown RBP1.4□□□□□ -2.18
TRAPPC13-208ENST00000505553 IQCJQ1A5X6 159 aa1.4□□□□□ -2.18
TRAPPC13-208ENST00000505553 DEFB133Q30KQ1 61 aa1.4□□□□□ -2.18
TRAPPC13-208ENST00000505553 SPANXN1Q5VSR9 72 aa1.4□□□□□ -2.18
TRAPPC13-208ENST00000505553 NDUFA11Q86Y39 141 aa1.4□□□□□ -2.18
TRAPPC13-208ENST00000505553 CELSR2Q9HCU4 2923 aa1.4□□□□□ -2.18
TRAPPC13-208ENST00000505553 FLNAP21333 2647 aaKnown RBP1.4□□□□□ -2.19
TRAPPC13-208ENST00000505553 CELSR1Q9NYQ6 3014 aa1.4□□□□□ -2.19
TRAPPC13-208ENST00000505553 BOD1L1Q8NFC6 3051 aa1.4□□□□□ -2.19
TRAPPC13-208ENST00000505553 PTPRDP23468 1912 aa1.4□□□□□ -2.19
TRAPPC13-208ENST00000505553 ACANP16112 2415 aa1.4□□□□□ -2.19
TRAPPC13-208ENST00000505553 PITX3O75364 302 aa1.4□□□□□ -2.19
TRAPPC13-208ENST00000505553 FXYD4P59646 89 aa1.4□□□□□ -2.19
TRAPPC13-208ENST00000505553 WHAMMP3Q1A5X7 153 aa1.4□□□□□ -2.19
TRAPPC13-208ENST00000505553 OR2T2Q6IF00 324 aa1.4□□□□□ -2.19
TRAPPC13-208ENST00000505553 DPH3Q96FX2 82 aa1.4□□□□□ -2.19
TRAPPC13-208ENST00000505553 C12orf57Q99622 126 aa1.4□□□□□ -2.19
TRAPPC13-208ENST00000505553 C2orf88Q9BSF0 95 aa1.4□□□□□ -2.19
TRAPPC13-208ENST00000505553 PDCD10Q9BUL8 212 aa1.4□□□□□ -2.19
TRAPPC13-208ENST00000505553 MUC4Q99102 2169 aa1.4□□□□□ -2.19
TRAPPC13-208ENST00000505553 MYH9P35579 1960 aaKnown RBP1.39□□□□□ -2.19
TRAPPC13-208ENST00000505553 TLN2Q9Y4G6 2542 aa1.39□□□□□ -2.19
TRAPPC13-208ENST00000505553 CXorf51AA0A1B0GTR3 108 aa1.39□□□□□ -2.19
TRAPPC13-208ENST00000505553 PIPP12273 146 aaPredicted RBP1.39□□□□□ -2.19
TRAPPC13-208ENST00000505553 S100PP25815 95 aa1.39□□□□□ -2.19
TRAPPC13-208ENST00000505553 LINC00575Q6W349 94 aa1.39□□□□□ -2.19
TRAPPC13-208ENST00000505553 SMR3AQ99954 134 aa1.39□□□□□ -2.19
TRAPPC13-208ENST00000505553 SNRNP25Q9BV90 132 aaKnown RBP1.39□□□□□ -2.19
TRAPPC13-208ENST00000505553 GNG8Q9UK08 70 aa1.39□□□□□ -2.19
TRAPPC13-208ENST00000505553 U3KQA8 63 aa1.39□□□□□ -2.19
TRAPPC13-208ENST00000505553 CRYBG3Q68DQ2 2970 aa1.38□□□□□ -2.19
TRAPPC13-208ENST00000505553 NSD1Q96L73 2696 aaPredicted RBP1.38□□□□□ -2.19
TRAPPC13-208ENST00000505553 ABCA4P78363 2273 aa1.38□□□□□ -2.19
TRAPPC13-208ENST00000505553 IL5P05113 134 aa1.38□□□□□ -2.19
TRAPPC13-208ENST00000505553 PIRTP0C851 137 aa1.38□□□□□ -2.19
TRAPPC13-208ENST00000505553 SLC25A6P12236 298 aa1.38□□□□□ -2.19
TRAPPC13-208ENST00000505553 FGF7P21781 194 aa1.38□□□□□ -2.19
TRAPPC13-208ENST00000505553 Q6ZQY7 126 aa1.38□□□□□ -2.19
TRAPPC13-208ENST00000505553 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.38□□□□□ -2.19
TRAPPC13-208ENST00000505553 TMEM203Q969S6 136 aa1.38□□□□□ -2.19
TRAPPC13-208ENST00000505553 SPTSSAQ969W0 71 aa1.38□□□□□ -2.19
TRAPPC13-208ENST00000505553 TMEM242Q9NWH2 141 aa1.38□□□□□ -2.19
TRAPPC13-208ENST00000505553 NDUFA12Q9UI09 145 aa1.38□□□□□ -2.19
TRAPPC13-208ENST00000505553 TNRC6AQ8NDV7 1962 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-208ENST00000505553 PKDREJQ9NTG1 2253 aa1.37□□□□□ -2.19
TRAPPC13-208ENST00000505553 SPTY2D1-AS1A0A0U1RR47 76 aa1.37□□□□□ -2.19
TRAPPC13-208ENST00000505553 PLXNA2O75051 1894 aa1.37□□□□□ -2.19
TRAPPC13-208ENST00000505553 CCKP06307 115 aa1.37□□□□□ -2.19
TRAPPC13-208ENST00000505553 PRB4P10163 310 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-208ENST00000505553 MEIG1Q5JSS6 88 aa1.37□□□□□ -2.19
TRAPPC13-208ENST00000505553 XAF1Q6GPH4 301 aa1.37□□□□□ -2.19
TRAPPC13-208ENST00000505553 BSNQ9UPA5 3926 aa1.37□□□□□ -2.19
TRAPPC13-208ENST00000505553 MYO18AQ92614 2054 aaKnown RBP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms