RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 RYR1P21817 5038 aa3.24□□□□□ -1.89
LMNB1-208ENST00000504788 A0A087WTM6 91 aa3.24□□□□□ -1.89
LMNB1-208ENST00000504788 TRAV8-4A0A0B4J246 113 aa3.24□□□□□ -1.89
LMNB1-208ENST00000504788 IFITM10A6NMD0 228 aa3.24□□□□□ -1.89
LMNB1-208ENST00000504788 HBDP02042 147 aa3.24□□□□□ -1.89
LMNB1-208ENST00000504788 SLPIP03973 132 aa3.24□□□□□ -1.89
LMNB1-208ENST00000504788 UBE2D1P51668 147 aa3.24□□□□□ -1.89
LMNB1-208ENST00000504788 COX6A2Q02221 97 aa3.24□□□□□ -1.89
LMNB1-208ENST00000504788 LINC00242Q5T6M2 205 aa3.24□□□□□ -1.89
LMNB1-208ENST00000504788 RNASEKQ6P5S7 137 aaKnown RBP3.24□□□□□ -1.89
LMNB1-208ENST00000504788 C15orf56Q8N910 161 aa3.24□□□□□ -1.89
LMNB1-208ENST00000504788 BAALCQ8WXS3 180 aa3.24□□□□□ -1.89
LMNB1-208ENST00000504788 TMEM141Q96I45 108 aa3.24□□□□□ -1.89
LMNB1-208ENST00000504788 IGLV4-69A0A075B6H9 119 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 IGLV10-54A0A075B6I4 117 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 IGLV5-45A0A087WSX0 123 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 PRSS29PA6NIE9 313 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 UBE2L6O14933 153 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 KRTAP10-2P60368 255 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 S100A12P80511 92 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 FA2HQ7L5A8 372 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 LINC00518Q8N0U6 118 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 CHCHD10Q8WYQ3 142 aaPredicted RBP3.23□□□□□ -1.89
LMNB1-208ENST00000504788 Q9HAA7 133 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 HSPG2P98160 4391 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 LINC01549A6NIU2 74 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 RAB5BP61020 215 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 LCE5AQ5TCM9 118 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 AMMECR1LQ6DCA0 310 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 SPATA12Q7Z6I5 190 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 NFE4Q86UQ8 179 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 TMEM18Q96B42 140 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 CST9LQ9H4G1 147 aa3.23□□□□□ -1.89
LMNB1-208ENST00000504788 IGKV2D-24A0A075B6R9 120 aa3.22□□□□□ -1.89
LMNB1-208ENST00000504788 C5orf52A6NGY3 159 aa3.22□□□□□ -1.89
LMNB1-208ENST00000504788 C1orf196B1AJZ1 125 aa3.22□□□□□ -1.89
LMNB1-208ENST00000504788 CCL25O15444 150 aa3.22□□□□□ -1.89
LMNB1-208ENST00000504788 HSBP1O75506 76 aa3.22□□□□□ -1.89
LMNB1-208ENST00000504788 KIAA0087Q14695 138 aa3.22□□□□□ -1.89
LMNB1-208ENST00000504788 CD164L2Q6UWJ8 174 aa3.22□□□□□ -1.89
LMNB1-208ENST00000504788 LINC00336Q6ZUF6 198 aa3.22□□□□□ -1.89
LMNB1-208ENST00000504788 BAGE3Q86Y29 109 aa3.22□□□□□ -1.89
LMNB1-208ENST00000504788 PACRGQ96M98 296 aaPredicted RBP3.22□□□□□ -1.89
LMNB1-208ENST00000504788 SCGB3A1Q96QR1 104 aa3.22□□□□□ -1.89
LMNB1-208ENST00000504788 C1orf43Q9BWL3 253 aa3.22□□□□□ -1.89
LMNB1-208ENST00000504788 FAT1Q14517 4588 aa3.22□□□□□ -1.89
LMNB1-208ENST00000504788 TRAV13-1A0A0B4J241 112 aa3.21□□□□□ -1.89
LMNB1-208ENST00000504788 TRAV12-1A0A0B4J245 112 aa3.21□□□□□ -1.89
LMNB1-208ENST00000504788 A0A0J9YXV3 536 aa3.21□□□□□ -1.89
LMNB1-208ENST00000504788 PCP4L1A6NKN8 68 aa3.21□□□□□ -1.89
LMNB1-208ENST00000504788 CRPP02741 224 aa3.21□□□□□ -1.89
LMNB1-208ENST00000504788 PRSS1P07477 247 aa3.21□□□□□ -1.89
LMNB1-208ENST00000504788 G0S2P27469 103 aa3.21□□□□□ -1.89
LMNB1-208ENST00000504788 ODF1Q14990 250 aa3.21□□□□□ -1.89
LMNB1-208ENST00000504788 C21orf62-AS1Q17RA5 79 aa3.21□□□□□ -1.89
LMNB1-208ENST00000504788 DGAT2L7PQ6IED9 249 aa3.21□□□□□ -1.89
LMNB1-208ENST00000504788 TEX43Q6ZNM6 134 aa3.21□□□□□ -1.89
LMNB1-208ENST00000504788 HIST3H2BBQ8N257 126 aa3.21□□□□□ -1.89
LMNB1-208ENST00000504788 Q8N814 137 aa3.21□□□□□ -1.89
LMNB1-208ENST00000504788 TMEM101Q96IK0 257 aa3.21□□□□□ -1.89
LMNB1-208ENST00000504788 COX11Q9Y6N1 276 aa3.21□□□□□ -1.89
LMNB1-208ENST00000504788 A0A087WZ39 114 aa3.21□□□□□ -1.9
LMNB1-208ENST00000504788 GVQW2A0A096LPI5 108 aaPredicted RBP3.21□□□□□ -1.9
LMNB1-208ENST00000504788 GAGE12HA6NDE8 117 aa3.21□□□□□ -1.9
LMNB1-208ENST00000504788 USP17L23D6RBM5 183 aa3.21□□□□□ -1.9
LMNB1-208ENST00000504788 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.21□□□□□ -1.9
LMNB1-208ENST00000504788 LECT2O14960 151 aa3.21□□□□□ -1.9
LMNB1-208ENST00000504788 IGLC3P0DOY3 106 aa3.21□□□□□ -1.9
LMNB1-208ENST00000504788 FUSP35637 526 aaKnown RBP eCLIP3.21□□□□□ -1.9
LMNB1-208ENST00000504788 XCL1P47992 114 aa3.21□□□□□ -1.9
LMNB1-208ENST00000504788 SMAGPQ0VAQ4 97 aa3.21□□□□□ -1.9
LMNB1-208ENST00000504788 PMVKQ15126 192 aa3.21□□□□□ -1.9
LMNB1-208ENST00000504788 IFI27L1Q96BM0 104 aa3.21□□□□□ -1.9
LMNB1-208ENST00000504788 TM2D2Q9BX73 214 aa3.21□□□□□ -1.9
LMNB1-208ENST00000504788 KRTAP9-8Q9BYQ0 159 aa3.21□□□□□ -1.9
LMNB1-208ENST00000504788 CDKN2A-AS1Q9UH64 79 aa3.21□□□□□ -1.9
LMNB1-208ENST00000504788 HERC2O95714 4834 aa3.2□□□□□ -1.9
LMNB1-208ENST00000504788 IGKV3OR2-268A0A0C4DH90 116 aa3.2□□□□□ -1.9
LMNB1-208ENST00000504788 TINCRA0A1B0GVN0 87 aa3.2□□□□□ -1.9
LMNB1-208ENST00000504788 C11orf86A6NJI1 115 aa3.2□□□□□ -1.9
LMNB1-208ENST00000504788 ATP5LO75964 103 aa3.2□□□□□ -1.9
LMNB1-208ENST00000504788 LEPROTL1O95214 131 aa3.2□□□□□ -1.9
LMNB1-208ENST00000504788 NDUFA6P56556 154 aa3.2□□□□□ -1.9
LMNB1-208ENST00000504788 CNBPP62633 177 aaKnown RBP3.2□□□□□ -1.9
LMNB1-208ENST00000504788 SVIPQ8NHG7 77 aa3.2□□□□□ -1.9
LMNB1-208ENST00000504788 HIST1H2BLQ99880 126 aa3.2□□□□□ -1.9
LMNB1-208ENST00000504788 VCX2Q9H322 139 aa3.2□□□□□ -1.9
LMNB1-208ENST00000504788 IGHV3-64A0A075B6Q5 118 aa3.19□□□□□ -1.9
LMNB1-208ENST00000504788 IGLV5-39A0A0G2JS06 123 aa3.19□□□□□ -1.9
LMNB1-208ENST00000504788 SMIM1B2RUZ4 78 aa3.19□□□□□ -1.9
LMNB1-208ENST00000504788 C3orf79P0CE67 100 aa3.19□□□□□ -1.9
LMNB1-208ENST00000504788 ZNF22P17026 224 aaPredicted RBP3.19□□□□□ -1.9
LMNB1-208ENST00000504788 SS18Q15532 418 aa3.19□□□□□ -1.9
LMNB1-208ENST00000504788 PAPPA-AS1Q5QFB9 102 aa3.19□□□□□ -1.9
LMNB1-208ENST00000504788 C5orf38Q86SI9 138 aa3.19□□□□□ -1.9
LMNB1-208ENST00000504788 LINC01561Q8N1V8 128 aa3.19□□□□□ -1.9
LMNB1-208ENST00000504788 RMI2Q96E14 147 aa3.19□□□□□ -1.9
LMNB1-208ENST00000504788 MRPL35Q9NZE8 188 aaKnown RBP3.19□□□□□ -1.9
LMNB1-208ENST00000504788 F8VRH5 84 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms