RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 DMBT1Q9UGM3 2413 aaPredicted RBP16.23■□□□□ 0.19
PVT1-201ENST00000504719 IGLV4-3A0A075B6K6 122 aa16.23■□□□□ 0.19
PVT1-201ENST00000504719 IGHV3-64A0A075B6Q5 118 aa16.23■□□□□ 0.19
PVT1-201ENST00000504719 YPEL4Q96NS1 127 aa16.23■□□□□ 0.19
PVT1-201ENST00000504719 IFITM10A6NMD0 228 aa16.22■□□□□ 0.19
PVT1-201ENST00000504719 GVQW2A0A096LPI5 108 aaPredicted RBP16.2■□□□□ 0.18
PVT1-201ENST00000504719 IGHV1-58A0A0C4DH39 117 aa16.2■□□□□ 0.18
PVT1-201ENST00000504719 CIRBPQ14011 172 aaKnown RBP16.2■□□□□ 0.18
PVT1-201ENST00000504719 CBLN2Q8IUK8 224 aa16.2■□□□□ 0.18
PVT1-201ENST00000504719 TMEM141Q96I45 108 aa16.2■□□□□ 0.18
PVT1-201ENST00000504719 COX7A2LO14548 114 aa16.19■□□□□ 0.18
PVT1-201ENST00000504719 G0S2P27469 103 aa16.19■□□□□ 0.18
PVT1-201ENST00000504719 SMCO4Q9NRQ5 59 aa16.19■□□□□ 0.18
PVT1-201ENST00000504719 MALP21145 153 aa16.18■□□□□ 0.18
PVT1-201ENST00000504719 LINC01546A6NGU7 62 aa16.17■□□□□ 0.18
PVT1-201ENST00000504719 IGIPA6NJ69 53 aa16.17■□□□□ 0.18
PVT1-201ENST00000504719 FA2HQ7L5A8 372 aa16.17■□□□□ 0.18
PVT1-201ENST00000504719 C5orf38Q86SI9 138 aa16.17■□□□□ 0.18
PVT1-201ENST00000504719 TOMM6Q96B49 74 aa16.17■□□□□ 0.18
PVT1-201ENST00000504719 Q6ZN92 141 aa16.16■□□□□ 0.18
PVT1-201ENST00000504719 TEX43Q6ZNM6 134 aa16.16■□□□□ 0.18
PVT1-201ENST00000504719 RPL37AP61513 92 aaKnown RBP16.15■□□□□ 0.18
PVT1-201ENST00000504719 ZC2HC1BQ5TFG8 222 aa16.15■□□□□ 0.18
PVT1-201ENST00000504719 PKHD1L1Q86WI1 4243 aa16.14■□□□□ 0.17
PVT1-201ENST00000504719 KRTAP29-1A8MX34 341 aaPredicted RBP16.14■□□□□ 0.17
PVT1-201ENST00000504719 NPSP0C0P6 89 aa16.14■□□□□ 0.17
PVT1-201ENST00000504719 CHTF8P0CG12 524 aa16.14■□□□□ 0.17
PVT1-201ENST00000504719 C18orf32Q8TCD1 76 aa16.14■□□□□ 0.17
PVT1-201ENST00000504719 LINC00526Q96FQ7 95 aa16.14■□□□□ 0.17
PVT1-201ENST00000504719 VCX2Q9H322 139 aa16.14■□□□□ 0.17
PVT1-201ENST00000504719 J3QL48 77 aa16.13■□□□□ 0.17
PVT1-201ENST00000504719 LINC00173Q6ZV60 143 aa16.13■□□□□ 0.17
PVT1-201ENST00000504719 SPACA4Q8TDM5 124 aa16.13■□□□□ 0.17
PVT1-201ENST00000504719 AMELXQ99217 191 aa16.13■□□□□ 0.17
PVT1-201ENST00000504719 C2orf88Q9BSF0 95 aa16.13■□□□□ 0.17
PVT1-201ENST00000504719 IGHV3OR16-9A0A0B4J2B5 98 aa16.12■□□□□ 0.17
PVT1-201ENST00000504719 ZNF561-AS1K7EIQ3 104 aa16.12■□□□□ 0.17
PVT1-201ENST00000504719 TIMM17AQ99595 171 aa16.12■□□□□ 0.17
PVT1-201ENST00000504719 UBE2D1P51668 147 aa16.11■□□□□ 0.17
PVT1-201ENST00000504719 COX6A2Q02221 97 aa16.11■□□□□ 0.17
PVT1-201ENST00000504719 LINC00242Q5T6M2 205 aa16.11■□□□□ 0.17
PVT1-201ENST00000504719 DPH3Q96FX2 82 aa16.11■□□□□ 0.17
PVT1-201ENST00000504719 SCGB3A1Q96QR1 104 aa16.11■□□□□ 0.17
PVT1-201ENST00000504719 A0A087WYN8 130 aa16.1■□□□□ 0.17
PVT1-201ENST00000504719 ERASQ7Z444 233 aa16.1■□□□□ 0.17
PVT1-201ENST00000504719 APOMO95445 188 aa16.09■□□□□ 0.17
PVT1-201ENST00000504719 PAPPA-AS1Q5QFB9 102 aa16.09■□□□□ 0.17
PVT1-201ENST00000504719 LINC00614P0C842 121 aa16.08■□□□□ 0.16
PVT1-201ENST00000504719 URB1-AS1Q96HZ7 61 aa16.08■□□□□ 0.16
PVT1-201ENST00000504719 IGLV4-69A0A075B6H9 119 aa16.07■□□□□ 0.16
PVT1-201ENST00000504719 LINC01549A6NIU2 74 aa16.07■□□□□ 0.16
PVT1-201ENST00000504719 PLAC8Q9NZF1 115 aa16.06■□□□□ 0.16
PVT1-201ENST00000504719 CARD19Q96LW7 228 aa16.05■□□□□ 0.16
PVT1-201ENST00000504719 LRP1Q07954 4544 aaKnown RBP16.05■□□□□ 0.16
PVT1-201ENST00000504719 FAT3Q8TDW7 4589 aa16.04■□□□□ 0.16
PVT1-201ENST00000504719 HNRNPA3P51991 378 aaKnown RBP16.04■□□□□ 0.16
PVT1-201ENST00000504719 SPAG11BQ08648 103 aa16.04■□□□□ 0.16
PVT1-201ENST00000504719 SYCNQ0VAF6 134 aa16.04■□□□□ 0.16
PVT1-201ENST00000504719 OR10D4PQ8NGN7 298 aa16.04■□□□□ 0.16
PVT1-201ENST00000504719 ORAOV1Q8WV07 137 aa16.04■□□□□ 0.16
PVT1-201ENST00000504719 A0A087WZ39 114 aa16.03■□□□□ 0.16
PVT1-201ENST00000504719 RAB5BP61020 215 aa16.03■□□□□ 0.16
PVT1-201ENST00000504719 MAJINQ3KP22 176 aa16.03■□□□□ 0.16
PVT1-201ENST00000504719 A0A096LNJ9 63 aa16.02■□□□□ 0.16
PVT1-201ENST00000504719 IGKV2-24A0A0C4DH68 120 aa16.02■□□□□ 0.16
PVT1-201ENST00000504719 OXTP01178 125 aa16.02■□□□□ 0.16
PVT1-201ENST00000504719 FAM19A3Q7Z5A8 133 aa16.02■□□□□ 0.16
PVT1-201ENST00000504719 PMCHL1Q16048 86 aa16.01■□□□□ 0.15
PVT1-201ENST00000504719 C2orf48Q96LS8 159 aa16.01■□□□□ 0.15
PVT1-201ENST00000504719 CAMK2N2Q96S95 79 aa16.01■□□□□ 0.15
PVT1-201ENST00000504719 A0A096LNI7 61 aa16■□□□□ 0.15
PVT1-201ENST00000504719 TRGC2P03986 189 aa16■□□□□ 0.15
PVT1-201ENST00000504719 Q6ZRU5 148 aa16■□□□□ 0.15
PVT1-201ENST00000504719 HBDP02042 147 aa15.99■□□□□ 0.15
PVT1-201ENST00000504719 PKIGQ9Y2B9 76 aa15.99■□□□□ 0.15
PVT1-201ENST00000504719 COLCA2A8K830 154 aa15.98■□□□□ 0.15
PVT1-201ENST00000504719 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.98■□□□□ 0.15
PVT1-201ENST00000504719 SEC11AP67812 179 aa15.98■□□□□ 0.15
PVT1-201ENST00000504719 STPG4Q8N801 248 aa15.98■□□□□ 0.15
PVT1-201ENST00000504719 A0A0J9YXV3 536 aa15.97■□□□□ 0.15
PVT1-201ENST00000504719 HERVK_113P63121 156 aa15.97■□□□□ 0.15
PVT1-201ENST00000504719 CST9LQ9H4G1 147 aa15.97■□□□□ 0.15
PVT1-201ENST00000504719 GEMIN7Q9H840 131 aaKnown RBP15.97■□□□□ 0.15
PVT1-201ENST00000504719 PMVKQ15126 192 aa15.96■□□□□ 0.15
PVT1-201ENST00000504719 LINC01561Q8N1V8 128 aa15.96■□□□□ 0.15
PVT1-201ENST00000504719 SCO1O75880 301 aa15.95■□□□□ 0.14
PVT1-201ENST00000504719 LINC00474Q9P2X8 69 aa15.95■□□□□ 0.14
PVT1-201ENST00000504719 PDZD11Q5EBL8 140 aa15.94■□□□□ 0.14
PVT1-201ENST00000504719 C7orf33Q8WU49 177 aa15.94■□□□□ 0.14
PVT1-201ENST00000504719 CHCHD1Q96BP2 118 aaKnown RBP15.94■□□□□ 0.14
PVT1-201ENST00000504719 CDKN2A-AS1Q9UH64 79 aa15.94■□□□□ 0.14
PVT1-201ENST00000504719 F8WDY8 70 aa15.93■□□□□ 0.14
PVT1-201ENST00000504719 TINCRA0A1B0GVN0 87 aa15.92■□□□□ 0.14
PVT1-201ENST00000504719 KIAA0087Q14695 138 aa15.92■□□□□ 0.14
PVT1-201ENST00000504719 BAGE3Q86Y29 109 aa15.92■□□□□ 0.14
PVT1-201ENST00000504719 NDUFA1O15239 70 aa15.91■□□□□ 0.14
PVT1-201ENST00000504719 NDUFA6P56556 154 aa15.91■□□□□ 0.14
PVT1-201ENST00000504719 LINC00469Q8N7U9 141 aa15.91■□□□□ 0.14
PVT1-201ENST00000504719 LOC107984640A0A0U1RRK4 108 aa15.9■□□□□ 0.14
PVT1-201ENST00000504719 C10orf25Q5T742 122 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms