RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 COX8CQ7Z4L0 72 aa11.81□□□□□ -0.52
HMGXB3-202ENST00000503427 HIGD2AQ9BW72 106 aa11.81□□□□□ -0.52
HMGXB3-202ENST00000503427 COL4A2P08572 1712 aa11.8□□□□□ -0.52
HMGXB3-202ENST00000503427 LINC00959A0A1B0GUT2 108 aa11.79□□□□□ -0.52
HMGXB3-202ENST00000503427 USP9XQ93008 2570 aaPredicted RBP11.78□□□□□ -0.52
HMGXB3-202ENST00000503427 FAM236DA0A1B0GTK5 79 aa11.78□□□□□ -0.52
HMGXB3-202ENST00000503427 FAM236CP0DP71 79 aa11.78□□□□□ -0.52
HMGXB3-202ENST00000503427 EML5Q05BV3 1969 aa11.78□□□□□ -0.52
HMGXB3-202ENST00000503427 POM121L12Q8N7R1 296 aa11.78□□□□□ -0.52
HMGXB3-202ENST00000503427 FLNBO75369 2602 aaKnown RBP11.78□□□□□ -0.52
HMGXB3-202ENST00000503427 UBE2D3P61077 147 aa11.77□□□□□ -0.52
HMGXB3-202ENST00000503427 UBE2D2P62837 147 aa11.77□□□□□ -0.52
HMGXB3-202ENST00000503427 SYCNQ0VAF6 134 aa11.77□□□□□ -0.52
HMGXB3-202ENST00000503427 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.77□□□□□ -0.52
HMGXB3-202ENST00000503427 SMR3AQ99954 134 aa11.77□□□□□ -0.52
HMGXB3-202ENST00000503427 XGP55808 180 aa11.77□□□□□ -0.53
HMGXB3-202ENST00000503427 TLN2Q9Y4G6 2542 aa11.77□□□□□ -0.53
HMGXB3-202ENST00000503427 SMIM11BQ8TCY0 68 aa11.77□□□□□ -0.53
HMGXB3-202ENST00000503427 CDC42SE2Q9NRR3 84 aa11.77□□□□□ -0.53
HMGXB3-202ENST00000503427 CENPFP49454 3210 aa11.76□□□□□ -0.53
HMGXB3-202ENST00000503427 LOC100131303A0A0U1RQF7 123 aa11.76□□□□□ -0.53
HMGXB3-202ENST00000503427 SCXQ7RTU7 201 aa11.76□□□□□ -0.53
HMGXB3-202ENST00000503427 PRM2P04554 102 aa11.76□□□□□ -0.53
HMGXB3-202ENST00000503427 RAI1Q7Z5J4 1906 aaPredicted RBP11.75□□□□□ -0.53
HMGXB3-202ENST00000503427 C4orf48Q5BLP8 95 aa11.75□□□□□ -0.53
HMGXB3-202ENST00000503427 FAM19A1Q7Z5A9 133 aa11.75□□□□□ -0.53
HMGXB3-202ENST00000503427 SERP2Q8N6R1 65 aa11.75□□□□□ -0.53
HMGXB3-202ENST00000503427 WFDC10AQ9H1F0 79 aa11.75□□□□□ -0.53
HMGXB3-202ENST00000503427 CCKP06307 115 aa11.75□□□□□ -0.53
HMGXB3-202ENST00000503427 ABCA12Q86UK0 2595 aa11.75□□□□□ -0.53
HMGXB3-202ENST00000503427 TRAV10A0A0B4J240 114 aa11.74□□□□□ -0.53
HMGXB3-202ENST00000503427 COX17Q14061 63 aa11.74□□□□□ -0.53
HMGXB3-202ENST00000503427 DOPEY1Q5JWR5 2465 aa11.74□□□□□ -0.53
HMGXB3-202ENST00000503427 Q6ZQY7 126 aa11.74□□□□□ -0.53
HMGXB3-202ENST00000503427 IGLV4-69A0A075B6H9 119 aa11.74□□□□□ -0.53
HMGXB3-202ENST00000503427 LELP1Q5T871 98 aa11.74□□□□□ -0.53
HMGXB3-202ENST00000503427 ADAMTS20P59510 1910 aa11.74□□□□□ -0.53
HMGXB3-202ENST00000503427 USP17L23D6RBM5 183 aa11.73□□□□□ -0.53
HMGXB3-202ENST00000503427 MUC7Q8TAX7 377 aa11.73□□□□□ -0.53
HMGXB3-202ENST00000503427 LINC00242Q5T6M2 205 aa11.73□□□□□ -0.53
HMGXB3-202ENST00000503427 ODF3L2Q3SX64 289 aa11.73□□□□□ -0.53
HMGXB3-202ENST00000503427 Q8IZM0 81 aa11.73□□□□□ -0.53
HMGXB3-202ENST00000503427 A0A096LNJ9 63 aa11.72□□□□□ -0.53
HMGXB3-202ENST00000503427 M0R378 163 aa11.72□□□□□ -0.53
HMGXB3-202ENST00000503427 USP9YO00507 2555 aaPredicted RBP11.71□□□□□ -0.53
HMGXB3-202ENST00000503427 C16orf95Q9H693 158 aa11.71□□□□□ -0.53
HMGXB3-202ENST00000503427 BRK1Q8WUW1 75 aa11.71□□□□□ -0.53
HMGXB3-202ENST00000503427 FAM240AA0A1B0GVK7 77 aa11.71□□□□□ -0.54
HMGXB3-202ENST00000503427 POLQO75417 2590 aa11.71□□□□□ -0.54
HMGXB3-202ENST00000503427 IGLV1-51P01701 117 aa11.7□□□□□ -0.54
HMGXB3-202ENST00000503427 Q6Q795 121 aa11.7□□□□□ -0.54
HMGXB3-202ENST00000503427 C1orf158Q8N1D5 194 aa11.69□□□□□ -0.54
HMGXB3-202ENST00000503427 FAM19A5Q7Z5A7 132 aaPredicted RBP11.69□□□□□ -0.54
HMGXB3-202ENST00000503427 NDUFC1O43677 76 aa11.69□□□□□ -0.54
HMGXB3-202ENST00000503427 COX7CP15954 63 aa11.69□□□□□ -0.54
HMGXB3-202ENST00000503427 EDN2P20800 178 aa11.69□□□□□ -0.54
HMGXB3-202ENST00000503427 IGKV4-1P06312 121 aa11.68□□□□□ -0.54
HMGXB3-202ENST00000503427 DHRS4-AS1Q9P1J3 65 aa11.68□□□□□ -0.54
HMGXB3-202ENST00000503427 IGLV2-18A0A075B6J9 118 aa11.68□□□□□ -0.54
HMGXB3-202ENST00000503427 SMIM1B2RUZ4 78 aa11.68□□□□□ -0.54
HMGXB3-202ENST00000503427 LINC00526Q96FQ7 95 aa11.68□□□□□ -0.54
HMGXB3-202ENST00000503427 KPRPQ5T749 579 aaPredicted RBP11.67□□□□□ -0.54
HMGXB3-202ENST00000503427 CHCHD7Q9BUK0 85 aa11.67□□□□□ -0.54
HMGXB3-202ENST00000503427 A0A087WZ39 114 aa11.67□□□□□ -0.54
HMGXB3-202ENST00000503427 TSPEAR-AS2P59090 65 aa11.67□□□□□ -0.54
HMGXB3-202ENST00000503427 Q6JHZ5 121 aa11.67□□□□□ -0.54
HMGXB3-202ENST00000503427 A0A096LNI7 61 aa11.67□□□□□ -0.54
HMGXB3-202ENST00000503427 ATP5EP56381 51 aaPredicted RBP11.66□□□□□ -0.54
HMGXB3-202ENST00000503427 C3orf84H3BNL1 204 aa11.66□□□□□ -0.54
HMGXB3-202ENST00000503427 CCDC179H3BU77 68 aa11.66□□□□□ -0.54
HMGXB3-202ENST00000503427 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.66□□□□□ -0.54
HMGXB3-202ENST00000503427 IGKV2-28A0A075B6P5 120 aa11.66□□□□□ -0.54
HMGXB3-202ENST00000503427 NDUFC2-KCTD14E9PQ53 114 aa11.66□□□□□ -0.54
HMGXB3-202ENST00000503427 IGKV2D-28P01615 120 aa11.66□□□□□ -0.54
HMGXB3-202ENST00000503427 AMELXQ99217 191 aa11.66□□□□□ -0.54
HMGXB3-202ENST00000503427 ZNF73O43830 326 aaPredicted RBP11.65□□□□□ -0.54
HMGXB3-202ENST00000503427 IGHV4-30-4P0DP06 118 aa11.65□□□□□ -0.54
HMGXB3-202ENST00000503427 PKD1L2Q7Z442 2459 aa11.65□□□□□ -0.55
HMGXB3-202ENST00000503427 CLUHP3Q96NS8 147 aa11.65□□□□□ -0.55
HMGXB3-202ENST00000503427 RPL28P46779 137 aaKnown RBP11.64□□□□□ -0.55
HMGXB3-202ENST00000503427 FAM19A3Q7Z5A8 133 aa11.64□□□□□ -0.55
HMGXB3-202ENST00000503427 MPLKIPQ8TAP9 179 aa11.64□□□□□ -0.55
HMGXB3-202ENST00000503427 CSDC2Q9Y534 153 aaKnown RBP11.64□□□□□ -0.55
HMGXB3-202ENST00000503427 OXLD1Q5BKU9 147 aa11.63□□□□□ -0.55
HMGXB3-202ENST00000503427 CYSRT1A8MQ03 144 aa11.62□□□□□ -0.55
HMGXB3-202ENST00000503427 COX6A2Q02221 97 aa11.61□□□□□ -0.55
HMGXB3-202ENST00000503427 NTM-AS1Q6ZSK4 140 aa11.6□□□□□ -0.55
HMGXB3-202ENST00000503427 WFDC10BQ8IUB3 73 aa11.6□□□□□ -0.55
HMGXB3-202ENST00000503427 ADAMTSL4-AS1Q5T5F5 129 aa11.6□□□□□ -0.55
HMGXB3-202ENST00000503427 FN1P02751 2386 aaKnown RBP11.6□□□□□ -0.55
HMGXB3-202ENST00000503427 SEC61GP60059 68 aa11.59□□□□□ -0.55
HMGXB3-202ENST00000503427 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.59□□□□□ -0.55
HMGXB3-202ENST00000503427 BEAN1Q3B7T3 259 aa11.59□□□□□ -0.55
HMGXB3-202ENST00000503427 SNURFQ9Y675 71 aa11.59□□□□□ -0.55
HMGXB3-202ENST00000503427 LINC00694P0DN24 101 aa11.59□□□□□ -0.55
HMGXB3-202ENST00000503427 LOC107984640A0A0U1RRK4 108 aa11.58□□□□□ -0.56
HMGXB3-202ENST00000503427 Q8N814 137 aa11.57□□□□□ -0.56
HMGXB3-202ENST00000503427 UNQ6190/PRO20217Q6UXQ8 127 aa11.57□□□□□ -0.56
HMGXB3-202ENST00000503427 MTORP42345 2549 aa11.57□□□□□ -0.56
HMGXB3-202ENST00000503427 UTRNP46939 3433 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms