RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.42□□□□□ -0.74
NEAT1-201ENST00000499732 IGKV2-29A2NJV5 120 aaPredicted RBP10.42□□□□□ -0.74
NEAT1-201ENST00000499732 H7C423 109 aa10.42□□□□□ -0.74
NEAT1-201ENST00000499732 MRPL23Q16540 153 aaKnown RBP10.42□□□□□ -0.74
NEAT1-201ENST00000499732 BEAN1Q3B7T3 259 aa10.42□□□□□ -0.74
NEAT1-201ENST00000499732 IGLV1-51P01701 117 aa10.42□□□□□ -0.74
NEAT1-201ENST00000499732 Q6ZSN1 163 aa10.42□□□□□ -0.74
NEAT1-201ENST00000499732 C11orf72Q8NBR9 251 aa10.42□□□□□ -0.74
NEAT1-201ENST00000499732 PKD1L1Q8TDX9 2849 aa10.41□□□□□ -0.74
NEAT1-201ENST00000499732 FAM240AA0A1B0GVK7 77 aa10.41□□□□□ -0.74
NEAT1-201ENST00000499732 RS1O15537 224 aa10.41□□□□□ -0.74
NEAT1-201ENST00000499732 TRRAPQ9Y4A5 3859 aa10.41□□□□□ -0.74
NEAT1-201ENST00000499732 CIRBPQ14011 172 aaKnown RBP10.4□□□□□ -0.74
NEAT1-201ENST00000499732 DEFB121Q5J5C9 76 aa10.4□□□□□ -0.74
NEAT1-201ENST00000499732 A8MZ25 164 aa10.4□□□□□ -0.75
NEAT1-201ENST00000499732 INSP01308 110 aa10.4□□□□□ -0.75
NEAT1-201ENST00000499732 FAM19A3Q7Z5A8 133 aa10.4□□□□□ -0.75
NEAT1-201ENST00000499732 COPS9Q8WXC6 57 aa10.4□□□□□ -0.75
NEAT1-201ENST00000499732 Q9UF83 564 aa10.4□□□□□ -0.75
NEAT1-201ENST00000499732 CDKN2A-AS1Q9UH64 79 aa10.4□□□□□ -0.75
NEAT1-201ENST00000499732 TRAV4A0A0B4J268 109 aa10.39□□□□□ -0.75
NEAT1-201ENST00000499732 HERVK_113P63121 156 aa10.39□□□□□ -0.75
NEAT1-201ENST00000499732 NDUFV3P56181 108 aaKnown RBP10.38□□□□□ -0.75
NEAT1-201ENST00000499732 CMC4P56277 68 aaPredicted RBP10.38□□□□□ -0.75
NEAT1-201ENST00000499732 NPC2P61916 151 aa10.38□□□□□ -0.75
NEAT1-201ENST00000499732 TMEM101Q96IK0 257 aa10.38□□□□□ -0.75
NEAT1-201ENST00000499732 LINC01587Q99440 93 aa10.38□□□□□ -0.75
NEAT1-201ENST00000499732 NOTCH3Q9UM47 2321 aa10.38□□□□□ -0.75
NEAT1-201ENST00000499732 IGLV5-39A0A0G2JS06 123 aa10.37□□□□□ -0.75
NEAT1-201ENST00000499732 GAGE5Q13069 117 aa10.37□□□□□ -0.75
NEAT1-201ENST00000499732 GAGE6Q13070 117 aa10.37□□□□□ -0.75
NEAT1-201ENST00000499732 CLEC2BQ92478 149 aa10.37□□□□□ -0.75
NEAT1-201ENST00000499732 IGHV3-38A0A0C4DH36 116 aa10.37□□□□□ -0.75
NEAT1-201ENST00000499732 C9orf66Q5T8R8 295 aa10.37□□□□□ -0.75
NEAT1-201ENST00000499732 DGAT2L7PQ6IED9 249 aa10.37□□□□□ -0.75
NEAT1-201ENST00000499732 C15orf53Q8NAA6 179 aa10.37□□□□□ -0.75
NEAT1-201ENST00000499732 WFDC9Q8NEX5 89 aa10.37□□□□□ -0.75
NEAT1-201ENST00000499732 PRM2P04554 102 aa10.36□□□□□ -0.75
NEAT1-201ENST00000499732 NHLRC4P0CG21 123 aaPredicted RBP10.36□□□□□ -0.75
NEAT1-201ENST00000499732 TTC32Q5I0X7 151 aa10.36□□□□□ -0.75
NEAT1-201ENST00000499732 STHQ8IWL8 128 aa10.36□□□□□ -0.75
NEAT1-201ENST00000499732 PPDPFQ9H3Y8 114 aa10.36□□□□□ -0.75
NEAT1-201ENST00000499732 LINC00308Q8TCZ7 52 aa10.35□□□□□ -0.75
NEAT1-201ENST00000499732 FAM110AQ9BQ89 295 aa10.35□□□□□ -0.75
NEAT1-201ENST00000499732 C19orf73Q9NVV2 129 aa10.35□□□□□ -0.75
NEAT1-201ENST00000499732 CSDC2Q9Y534 153 aaKnown RBP10.35□□□□□ -0.75
NEAT1-201ENST00000499732 IGHV3OR16-12A0A075B7B8 117 aa10.35□□□□□ -0.75
NEAT1-201ENST00000499732 LINC00242Q5T6M2 205 aa10.34□□□□□ -0.75
NEAT1-201ENST00000499732 IL17DQ8TAD2 202 aa10.34□□□□□ -0.75
NEAT1-201ENST00000499732 Q9H8V8 135 aa10.34□□□□□ -0.75
NEAT1-201ENST00000499732 VWFP04275 2813 aa10.34□□□□□ -0.75
NEAT1-201ENST00000499732 COX7A2LO14548 114 aa10.33□□□□□ -0.76
NEAT1-201ENST00000499732 COX6A2Q02221 97 aa10.33□□□□□ -0.76
NEAT1-201ENST00000499732 TRBV10-1A0A0K0K1A3 114 aa10.33□□□□□ -0.76
NEAT1-201ENST00000499732 DAND5Q8N907 189 aa10.33□□□□□ -0.76
NEAT1-201ENST00000499732 WFDC10AQ9H1F0 79 aa10.33□□□□□ -0.76
NEAT1-201ENST00000499732 SMIM1B2RUZ4 78 aa10.32□□□□□ -0.76
NEAT1-201ENST00000499732 XCL2Q9UBD3 114 aa10.32□□□□□ -0.76
NEAT1-201ENST00000499732 ACYP1P07311 99 aa10.31□□□□□ -0.76
NEAT1-201ENST00000499732 HERV-K104P63124 156 aa10.31□□□□□ -0.76
NEAT1-201ENST00000499732 DAZ2Q13117 558 aaKnown RBP10.31□□□□□ -0.76
NEAT1-201ENST00000499732 DAZ4Q86SG3 579 aaKnown RBP10.31□□□□□ -0.76
NEAT1-201ENST00000499732 DAZ3Q9NR90 486 aaKnown RBP10.31□□□□□ -0.76
NEAT1-201ENST00000499732 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
NEAT1-201ENST00000499732 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
NEAT1-201ENST00000499732 TRBV7-7A0A0K0K1E9 115 aa10.3□□□□□ -0.76
NEAT1-201ENST00000499732 GAGE12JA6NER3 117 aa10.3□□□□□ -0.76
NEAT1-201ENST00000499732 K7EQD1 137 aa10.3□□□□□ -0.76
NEAT1-201ENST00000499732 GAGE7O76087 117 aa10.3□□□□□ -0.76
NEAT1-201ENST00000499732 GAGE12FP0CL80 117 aa10.3□□□□□ -0.76
NEAT1-201ENST00000499732 GAGE12GP0CL81 117 aa10.3□□□□□ -0.76
NEAT1-201ENST00000499732 GAGE12IP0CL82 117 aa10.3□□□□□ -0.76
NEAT1-201ENST00000499732 GAGE4Q13068 117 aa10.3□□□□□ -0.76
NEAT1-201ENST00000499732 C1orf158Q8N1D5 194 aa10.3□□□□□ -0.76
NEAT1-201ENST00000499732 SVIPQ8NHG7 77 aa10.3□□□□□ -0.76
NEAT1-201ENST00000499732 ZNF625Q96I27 306 aaPredicted RBP10.3□□□□□ -0.76
NEAT1-201ENST00000499732 TRACP01848 142 aa10.28□□□□□ -0.76
NEAT1-201ENST00000499732 GIG44P09565 113 aaPredicted RBP10.28□□□□□ -0.76
NEAT1-201ENST00000499732 LINC00694P0DN24 101 aa10.28□□□□□ -0.76
NEAT1-201ENST00000499732 NOTCH1P46531 2555 aa10.28□□□□□ -0.76
NEAT1-201ENST00000499732 MEIG1Q5JSS6 88 aa10.28□□□□□ -0.76
NEAT1-201ENST00000499732 SOSTDC1Q6X4U4 206 aa10.28□□□□□ -0.76
NEAT1-201ENST00000499732 TRGV1A0A0A0MS02 117 aa10.27□□□□□ -0.77
NEAT1-201ENST00000499732 B5MCH6 92 aa10.27□□□□□ -0.77
NEAT1-201ENST00000499732 F5H768 121 aa10.27□□□□□ -0.77
NEAT1-201ENST00000499732 CDC42SE2Q9NRR3 84 aa10.27□□□□□ -0.77
NEAT1-201ENST00000499732 RPL35AP18077 110 aaKnown RBP10.26□□□□□ -0.77
NEAT1-201ENST00000499732 IMUPQ9GZP8 106 aa10.26□□□□□ -0.77
NEAT1-201ENST00000499732 SS18L2Q9UHA2 77 aa10.26□□□□□ -0.77
NEAT1-201ENST00000499732 TGP01266 2768 aa10.26□□□□□ -0.77
NEAT1-201ENST00000499732 CMYA5Q8N3K9 4069 aa10.26□□□□□ -0.77
NEAT1-201ENST00000499732 FAM222AQ5U5X8 452 aa10.26□□□□□ -0.77
NEAT1-201ENST00000499732 NTM-AS1Q6ZSK4 140 aa10.26□□□□□ -0.77
NEAT1-201ENST00000499732 TRAV13-1A0A0B4J241 112 aa10.25□□□□□ -0.77
NEAT1-201ENST00000499732 CCDC179H3BU77 68 aa10.24□□□□□ -0.77
NEAT1-201ENST00000499732 CSNK1G2-AS1Q8NCQ2 148 aa10.23□□□□□ -0.77
NEAT1-201ENST00000499732 TRAV13-2A0A0B4J235 113 aa10.23□□□□□ -0.77
NEAT1-201ENST00000499732 A0A0U1RRA0 63 aa10.23□□□□□ -0.77
NEAT1-201ENST00000499732 UBE2L6O14933 153 aa10.22□□□□□ -0.77
NEAT1-201ENST00000499732 TMEM243Q9BU79 118 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms