RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 SPINK6Q6UWN8 80 aa12.6□□□□□ -0.39
LMBR1-219ENST00000498034 PPBPP02775 128 aa12.59□□□□□ -0.39
LMBR1-219ENST00000498034 MRPS36P82909 103 aaKnown RBP12.59□□□□□ -0.39
LMBR1-219ENST00000498034 RPL18AQ02543 176 aaKnown RBP12.59□□□□□ -0.39
LMBR1-219ENST00000498034 IGHV3OR16-9A0A0B4J2B5 98 aa12.58□□□□□ -0.4
LMBR1-219ENST00000498034 SRSF9Q13242 221 aaKnown RBP eCLIP12.58□□□□□ -0.4
LMBR1-219ENST00000498034 OR10D4PQ8NGN7 298 aa12.58□□□□□ -0.4
LMBR1-219ENST00000498034 ORAOV1Q8WV07 137 aa12.58□□□□□ -0.4
LMBR1-219ENST00000498034 IFITM10A6NMD0 228 aa12.57□□□□□ -0.4
LMBR1-219ENST00000498034 ODF1Q14990 250 aa12.57□□□□□ -0.4
LMBR1-219ENST00000498034 C9orf116Q5BN46 136 aaPredicted RBP12.57□□□□□ -0.4
LMBR1-219ENST00000498034 TMEM136Q6ZRR5 245 aa12.57□□□□□ -0.4
LMBR1-219ENST00000498034 ORMDL3Q8N138 153 aa12.57□□□□□ -0.4
LMBR1-219ENST00000498034 UBR4Q5T4S7 5183 aa12.57□□□□□ -0.4
LMBR1-219ENST00000498034 RNF151Q2KHN1 245 aa12.56□□□□□ -0.4
LMBR1-219ENST00000498034 ATP5L2Q7Z4Y8 100 aa12.56□□□□□ -0.4
LMBR1-219ENST00000498034 PRELID3AQ96N28 172 aa12.56□□□□□ -0.4
LMBR1-219ENST00000498034 REG3GQ6UW15 175 aa12.55□□□□□ -0.4
LMBR1-219ENST00000498034 TNXBP22105 4242 aa12.54□□□□□ -0.4
LMBR1-219ENST00000498034 RAB5AP20339 215 aa12.54□□□□□ -0.4
LMBR1-219ENST00000498034 MRPL35Q9NZE8 188 aaKnown RBP12.54□□□□□ -0.4
LMBR1-219ENST00000498034 IFI27P40305 119 aaPredicted RBP12.53□□□□□ -0.4
LMBR1-219ENST00000498034 C10orf25Q5T742 122 aa12.53□□□□□ -0.4
LMBR1-219ENST00000498034 PHF5AQ7RTV0 110 aaKnown RBP12.53□□□□□ -0.4
LMBR1-219ENST00000498034 LOC389332A0A1B0GUA5 103 aa12.52□□□□□ -0.41
LMBR1-219ENST00000498034 KRTAP10-8P60410 259 aa12.52□□□□□ -0.41
LMBR1-219ENST00000498034 PSORS1C2Q9UIG4 136 aa12.52□□□□□ -0.41
LMBR1-219ENST00000498034 IGLV4-3A0A075B6K6 122 aa12.51□□□□□ -0.41
LMBR1-219ENST00000498034 F8WDY8 70 aa12.51□□□□□ -0.41
LMBR1-219ENST00000498034 NDUFA1O15239 70 aa12.51□□□□□ -0.41
LMBR1-219ENST00000498034 UNQ6190/PRO20217Q6UXQ8 127 aa12.51□□□□□ -0.41
LMBR1-219ENST00000498034 PYGO1Q9Y3Y4 419 aa12.51□□□□□ -0.41
LMBR1-219ENST00000498034 TGIF2-C20orf24A0A0A6YYL0 155 aa12.5□□□□□ -0.41
LMBR1-219ENST00000498034 PRSS47A8MTI9 375 aa12.5□□□□□ -0.41
LMBR1-219ENST00000498034 IMMP2LQ96T52 175 aa12.5□□□□□ -0.41
LMBR1-219ENST00000498034 MT-ND6P03923 174 aa12.49□□□□□ -0.41
LMBR1-219ENST00000498034 LINC00242Q5T6M2 205 aa12.49□□□□□ -0.41
LMBR1-219ENST00000498034 C6orf48Q9UBA6 75 aa12.49□□□□□ -0.41
LMBR1-219ENST00000498034 A0A087WZ39 114 aa12.48□□□□□ -0.41
LMBR1-219ENST00000498034 PNRC1Q12796 327 aaPredicted RBP12.48□□□□□ -0.41
LMBR1-219ENST00000498034 TMEM141Q96I45 108 aa12.48□□□□□ -0.41
LMBR1-219ENST00000498034 MAP1LC3AQ9H492 121 aa12.48□□□□□ -0.41
LMBR1-219ENST00000498034 FAM168BA1KXE4 195 aa12.47□□□□□ -0.41
LMBR1-219ENST00000498034 MT-ND4LP03901 98 aa12.47□□□□□ -0.41
LMBR1-219ENST00000498034 KIAA0087Q14695 138 aa12.47□□□□□ -0.41
LMBR1-219ENST00000498034 C1orf137Q5JT78 98 aa12.47□□□□□ -0.41
LMBR1-219ENST00000498034 ANAPC16Q96DE5 110 aa12.47□□□□□ -0.41
LMBR1-219ENST00000498034 LAMTOR2Q9Y2Q5 125 aa12.47□□□□□ -0.41
LMBR1-219ENST00000498034 TLX1NBP0CAT3 122 aa12.46□□□□□ -0.41
LMBR1-219ENST00000498034 ZC2HC1BQ5TFG8 222 aa12.46□□□□□ -0.41
LMBR1-219ENST00000498034 GAGE2EQ4V326 116 aa12.45□□□□□ -0.42
LMBR1-219ENST00000498034 TEX43Q6ZNM6 134 aa12.45□□□□□ -0.42
LMBR1-219ENST00000498034 Q8N8P6 123 aa12.45□□□□□ -0.42
LMBR1-219ENST00000498034 GAGE2DQ9UEU5 116 aa12.45□□□□□ -0.42
LMBR1-219ENST00000498034 UBE2D1P51668 147 aa12.44□□□□□ -0.42
LMBR1-219ENST00000498034 C2orf82Q6UX34 121 aa12.44□□□□□ -0.42
LMBR1-219ENST00000498034 C2orf66Q6UXQ4 117 aa12.44□□□□□ -0.42
LMBR1-219ENST00000498034 CYSLTR1Q9Y271 337 aa12.44□□□□□ -0.42
LMBR1-219ENST00000498034 RAB14P61106 215 aa12.43□□□□□ -0.42
LMBR1-219ENST00000498034 LINC00173Q6ZV60 143 aa12.43□□□□□ -0.42
LMBR1-219ENST00000498034 FAM19A5Q7Z5A7 132 aaPredicted RBP12.43□□□□□ -0.42
LMBR1-219ENST00000498034 KRTAP11-1Q8IUC1 163 aa12.43□□□□□ -0.42
LMBR1-219ENST00000498034 C2orf88Q9BSF0 95 aa12.42□□□□□ -0.42
LMBR1-219ENST00000498034 KRTAP7-1Q8IUC3 87 aa12.41□□□□□ -0.42
LMBR1-219ENST00000498034 AMELXQ99217 191 aa12.41□□□□□ -0.42
LMBR1-219ENST00000498034 ORMDL2Q53FV1 153 aa12.4□□□□□ -0.42
LMBR1-219ENST00000498034 Q6ZN92 141 aa12.4□□□□□ -0.42
LMBR1-219ENST00000498034 VCX2Q9H322 139 aa12.4□□□□□ -0.42
LMBR1-219ENST00000498034 TRBV30A0A0K0K1B3 111 aa12.39□□□□□ -0.43
LMBR1-219ENST00000498034 IGLV7-43P04211 117 aa12.39□□□□□ -0.43
LMBR1-219ENST00000498034 LINC01561Q8N1V8 128 aa12.39□□□□□ -0.43
LMBR1-219ENST00000498034 IGIPA6NJ69 53 aa12.38□□□□□ -0.43
LMBR1-219ENST00000498034 PACRGQ96M98 296 aaPredicted RBP12.38□□□□□ -0.43
LMBR1-219ENST00000498034 CTDSP1Q9GZU7 261 aa12.38□□□□□ -0.43
LMBR1-219ENST00000498034 NDUFC2-KCTD14E9PQ53 114 aa12.37□□□□□ -0.43
LMBR1-219ENST00000498034 LRP2P98164 4655 aa12.37□□□□□ -0.43
LMBR1-219ENST00000498034 K7EMI3 77 aa12.36□□□□□ -0.43
LMBR1-219ENST00000498034 C9orf129Q5T035 196 aaKnown RBP12.36□□□□□ -0.43
LMBR1-219ENST00000498034 NXT2Q9NPJ8 142 aaKnown RBP12.36□□□□□ -0.43
LMBR1-219ENST00000498034 TOMM7Q9P0U1 55 aa12.36□□□□□ -0.43
LMBR1-219ENST00000498034 M0QXV9 152 aa12.35□□□□□ -0.43
LMBR1-219ENST00000498034 NPSP0C0P6 89 aa12.35□□□□□ -0.43
LMBR1-219ENST00000498034 KIAA1644Q3SXP7 199 aa12.35□□□□□ -0.43
LMBR1-219ENST00000498034 PRSS2P07478 247 aa12.34□□□□□ -0.43
LMBR1-219ENST00000498034 CLLU1Q5K131 121 aa12.34□□□□□ -0.43
LMBR1-219ENST00000498034 FAM19A3Q7Z5A8 133 aa12.34□□□□□ -0.43
LMBR1-219ENST00000498034 DIRC1Q969H9 104 aa12.34□□□□□ -0.43
LMBR1-219ENST00000498034 ADCYAP1P18509 176 aa12.33□□□□□ -0.44
LMBR1-219ENST00000498034 UBE2BP63146 152 aa12.33□□□□□ -0.44
LMBR1-219ENST00000498034 CKS1BP61024 79 aa12.32□□□□□ -0.44
LMBR1-219ENST00000498034 C6orf226Q5I0X4 101 aa12.32□□□□□ -0.44
LMBR1-219ENST00000498034 PRR26Q8N8Z3 221 aa12.32□□□□□ -0.44
LMBR1-219ENST00000498034 H0Y9J4 135 aa12.31□□□□□ -0.44
LMBR1-219ENST00000498034 Q8IZM0 81 aa12.31□□□□□ -0.44
LMBR1-219ENST00000498034 TOMM6Q96B49 74 aa12.31□□□□□ -0.44
LMBR1-219ENST00000498034 ALKBH7Q9BT30 221 aaPredicted RBP12.31□□□□□ -0.44
LMBR1-219ENST00000498034 CDKN2A-AS1Q9UH64 79 aa12.31□□□□□ -0.44
LMBR1-219ENST00000498034 HERVK_113P63121 156 aa12.3□□□□□ -0.44
LMBR1-219ENST00000498034 PAPPA-AS1Q5QFB9 102 aa12.3□□□□□ -0.44
LMBR1-219ENST00000498034 LINC00469Q8N7U9 141 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms