RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 C5orf38Q86SI9 138 aa13.14□□□□□ -0.31
COL9A2-211ENST00000496215 PRSS3P2Q8NHM4 247 aa13.14□□□□□ -0.31
COL9A2-211ENST00000496215 NXT2Q9NPJ8 142 aaKnown RBP13.14□□□□□ -0.31
COL9A2-211ENST00000496215 PKHD1L1Q86WI1 4243 aa13.14□□□□□ -0.31
COL9A2-211ENST00000496215 IGLV4-3A0A075B6K6 122 aa13.13□□□□□ -0.31
COL9A2-211ENST00000496215 IGKV2-24A0A0C4DH68 120 aa13.13□□□□□ -0.31
COL9A2-211ENST00000496215 SYCNQ0VAF6 134 aa13.13□□□□□ -0.31
COL9A2-211ENST00000496215 C2orf66Q6UXQ4 117 aa13.13□□□□□ -0.31
COL9A2-211ENST00000496215 IGLV4-69A0A075B6H9 119 aa13.12□□□□□ -0.31
COL9A2-211ENST00000496215 A0A087WYN8 130 aa13.12□□□□□ -0.31
COL9A2-211ENST00000496215 TMEM141Q96I45 108 aa13.12□□□□□ -0.31
COL9A2-211ENST00000496215 LRP1Q07954 4544 aaKnown RBP13.12□□□□□ -0.31
COL9A2-211ENST00000496215 KIAA1644Q3SXP7 199 aa13.11□□□□□ -0.31
COL9A2-211ENST00000496215 GNB1LQ9BYB4 327 aa13.11□□□□□ -0.31
COL9A2-211ENST00000496215 RPS10P5Q9NQ39 176 aa13.11□□□□□ -0.31
COL9A2-211ENST00000496215 A0A096LNI7 61 aa13.1□□□□□ -0.31
COL9A2-211ENST00000496215 SPAG11BQ08648 103 aa13.1□□□□□ -0.31
COL9A2-211ENST00000496215 MAJINQ3KP22 176 aa13.1□□□□□ -0.31
COL9A2-211ENST00000496215 TEX43Q6ZNM6 134 aa13.1□□□□□ -0.31
COL9A2-211ENST00000496215 OR10D4PQ8NGN7 298 aa13.1□□□□□ -0.31
COL9A2-211ENST00000496215 CAMK2N2Q96S95 79 aa13.1□□□□□ -0.31
COL9A2-211ENST00000496215 TGIF2-C20orf24A0A0A6YYL0 155 aa13.09□□□□□ -0.31
COL9A2-211ENST00000496215 IGHV3OR16-9A0A0B4J2B5 98 aa13.09□□□□□ -0.31
COL9A2-211ENST00000496215 COX19Q49B96 90 aa13.09□□□□□ -0.31
COL9A2-211ENST00000496215 Q6ZN92 141 aa13.09□□□□□ -0.31
COL9A2-211ENST00000496215 C2orf88Q9BSF0 95 aa13.09□□□□□ -0.31
COL9A2-211ENST00000496215 PLAC8Q9NZF1 115 aa13.09□□□□□ -0.31
COL9A2-211ENST00000496215 MT-ND6P03923 174 aa13.08□□□□□ -0.32
COL9A2-211ENST00000496215 Q6ZRU5 148 aa13.08□□□□□ -0.32
COL9A2-211ENST00000496215 ORAOV1Q8WV07 137 aa13.08□□□□□ -0.32
COL9A2-211ENST00000496215 C2orf48Q96LS8 159 aa13.08□□□□□ -0.32
COL9A2-211ENST00000496215 LINC00474Q9P2X8 69 aa13.08□□□□□ -0.32
COL9A2-211ENST00000496215 FAT3Q8TDW7 4589 aa13.07□□□□□ -0.32
COL9A2-211ENST00000496215 NPSP0C0P6 89 aa13.06□□□□□ -0.32
COL9A2-211ENST00000496215 G0S2P27469 103 aa13.06□□□□□ -0.32
COL9A2-211ENST00000496215 STPG4Q8N801 248 aa13.06□□□□□ -0.32
COL9A2-211ENST00000496215 LOC107984640A0A0U1RRK4 108 aa13.05□□□□□ -0.32
COL9A2-211ENST00000496215 NDUFA5Q16718 116 aa13.05□□□□□ -0.32
COL9A2-211ENST00000496215 LINC00242Q5T6M2 205 aa13.05□□□□□ -0.32
COL9A2-211ENST00000496215 UBE2D1P51668 147 aa13.04□□□□□ -0.32
COL9A2-211ENST00000496215 C7orf33Q8WU49 177 aa13.04□□□□□ -0.32
COL9A2-211ENST00000496215 ALKBH7Q9BT30 221 aaPredicted RBP13.04□□□□□ -0.32
COL9A2-211ENST00000496215 MRPL18Q9H0U6 180 aaKnown RBP13.04□□□□□ -0.32
COL9A2-211ENST00000496215 APOC3P02656 99 aa13.03□□□□□ -0.32
COL9A2-211ENST00000496215 LINC00173Q6ZV60 143 aa13.03□□□□□ -0.32
COL9A2-211ENST00000496215 AMELXQ99217 191 aa13.03□□□□□ -0.32
COL9A2-211ENST00000496215 VCX2Q9H322 139 aa13.03□□□□□ -0.32
COL9A2-211ENST00000496215 A0A087WZ39 114 aa13.02□□□□□ -0.33
COL9A2-211ENST00000496215 IGIPA6NJ69 53 aa13.02□□□□□ -0.33
COL9A2-211ENST00000496215 HNRNPA3P51991 378 aaKnown RBP13.02□□□□□ -0.33
COL9A2-211ENST00000496215 PAPPA-AS1Q5QFB9 102 aa13.02□□□□□ -0.33
COL9A2-211ENST00000496215 TOMM6Q96B49 74 aa13.02□□□□□ -0.33
COL9A2-211ENST00000496215 F8WDY8 70 aa13.01□□□□□ -0.33
COL9A2-211ENST00000496215 J3QL48 77 aa13.01□□□□□ -0.33
COL9A2-211ENST00000496215 SNAPINO95295 136 aa13.01□□□□□ -0.33
COL9A2-211ENST00000496215 PTTG1IPP53801 180 aa13.01□□□□□ -0.33
COL9A2-211ENST00000496215 FABP9Q0Z7S8 132 aa13.01□□□□□ -0.33
COL9A2-211ENST00000496215 ZC2HC1BQ5TFG8 222 aa13.01□□□□□ -0.33
COL9A2-211ENST00000496215 SVBPQ8N300 66 aa13.01□□□□□ -0.33
COL9A2-211ENST00000496215 TIMM17AQ99595 171 aa13.01□□□□□ -0.33
COL9A2-211ENST00000496215 NDUFA1O15239 70 aa13□□□□□ -0.33
COL9A2-211ENST00000496215 GAGE2BQ13066 116 aa13□□□□□ -0.33
COL9A2-211ENST00000496215 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.99□□□□□ -0.33
COL9A2-211ENST00000496215 RPL18AQ02543 176 aaKnown RBP12.99□□□□□ -0.33
COL9A2-211ENST00000496215 RNF151Q2KHN1 245 aa12.99□□□□□ -0.33
COL9A2-211ENST00000496215 MRPL35Q9NZE8 188 aaKnown RBP12.99□□□□□ -0.33
COL9A2-211ENST00000496215 KRTAP29-1A8MX34 341 aaPredicted RBP12.98□□□□□ -0.33
COL9A2-211ENST00000496215 A0A0J9YXV3 536 aa12.97□□□□□ -0.33
COL9A2-211ENST00000496215 LINC01546A6NGU7 62 aa12.97□□□□□ -0.33
COL9A2-211ENST00000496215 LINC01549A6NIU2 74 aa12.97□□□□□ -0.33
COL9A2-211ENST00000496215 FA2HQ7L5A8 372 aa12.97□□□□□ -0.33
COL9A2-211ENST00000496215 ERASQ7Z444 233 aa12.97□□□□□ -0.33
COL9A2-211ENST00000496215 SCGB3A1Q96QR1 104 aa12.97□□□□□ -0.33
COL9A2-211ENST00000496215 SMCO4Q9NRQ5 59 aa12.97□□□□□ -0.33
COL9A2-211ENST00000496215 FAM19A3Q7Z5A8 133 aa12.96□□□□□ -0.33
COL9A2-211ENST00000496215 LINC01561Q8N1V8 128 aa12.96□□□□□ -0.33
COL9A2-211ENST00000496215 SEC11AP67812 179 aa12.95□□□□□ -0.34
COL9A2-211ENST00000496215 TRAPPC1Q9Y5R8 145 aa12.95□□□□□ -0.34
COL9A2-211ENST00000496215 HERVK_113P63121 156 aa12.94□□□□□ -0.34
COL9A2-211ENST00000496215 C10orf25Q5T742 122 aa12.94□□□□□ -0.34
COL9A2-211ENST00000496215 UNQ6190/PRO20217Q6UXQ8 127 aa12.94□□□□□ -0.34
COL9A2-211ENST00000496215 KIAA0087Q14695 138 aa12.93□□□□□ -0.34
COL9A2-211ENST00000496215 GEMIN7Q9H840 131 aaKnown RBP12.93□□□□□ -0.34
COL9A2-211ENST00000496215 C6orf48Q9UBA6 75 aa12.93□□□□□ -0.34
COL9A2-211ENST00000496215 OXTP01178 125 aa12.92□□□□□ -0.34
COL9A2-211ENST00000496215 PRR3P79522 188 aaKnown RBP12.92□□□□□ -0.34
COL9A2-211ENST00000496215 PRSS2P07478 247 aa12.91□□□□□ -0.34
COL9A2-211ENST00000496215 PACRGQ96M98 296 aaPredicted RBP12.91□□□□□ -0.34
COL9A2-211ENST00000496215 TRBV30A0A0K0K1B3 111 aa12.9□□□□□ -0.34
COL9A2-211ENST00000496215 TLX1NBP0CAT3 122 aa12.9□□□□□ -0.34
COL9A2-211ENST00000496215 C18orf32Q8TCD1 76 aa12.9□□□□□ -0.34
COL9A2-211ENST00000496215 TOMM7Q9P0U1 55 aa12.9□□□□□ -0.34
COL9A2-211ENST00000496215 CDKN2A-AS1Q9UH64 79 aa12.9□□□□□ -0.34
COL9A2-211ENST00000496215 C9orf116Q5BN46 136 aaPredicted RBP12.89□□□□□ -0.35
COL9A2-211ENST00000496215 C2orf82Q6UX34 121 aa12.89□□□□□ -0.35
COL9A2-211ENST00000496215 A0A1W2PNN7 141 aa12.88□□□□□ -0.35
COL9A2-211ENST00000496215 Q6ZRP5 223 aa12.88□□□□□ -0.35
COL9A2-211ENST00000496215 Q8IZM0 81 aa12.88□□□□□ -0.35
COL9A2-211ENST00000496215 LINC00469Q8N7U9 141 aa12.88□□□□□ -0.35
COL9A2-211ENST00000496215 CKS1BP61024 79 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms