RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 OR5A1Q8NGJ0 315 aa11.29□□□□□ -0.6
SNX17-209ENST00000494893 TMEM101Q96IK0 257 aa11.29□□□□□ -0.6
SNX17-209ENST00000494893 COX11Q9Y6N1 276 aa11.29□□□□□ -0.6
SNX17-209ENST00000494893 PRSS1P07477 247 aa11.28□□□□□ -0.6
SNX17-209ENST00000494893 MIAQ16674 131 aa11.28□□□□□ -0.6
SNX17-209ENST00000494893 PAPPA-AS1Q5QFB9 102 aa11.28□□□□□ -0.6
SNX17-209ENST00000494893 AKR1D1P51857 326 aa11.27□□□□□ -0.61
SNX17-209ENST00000494893 REG3AQ06141 175 aa11.27□□□□□ -0.61
SNX17-209ENST00000494893 CDPF1Q6NVV7 123 aa11.27□□□□□ -0.61
SNX17-209ENST00000494893 PET117Q6UWS5 81 aa11.27□□□□□ -0.61
SNX17-209ENST00000494893 Q6ZUT4 128 aa11.27□□□□□ -0.61
SNX17-209ENST00000494893 C1orf43Q9BWL3 253 aa11.27□□□□□ -0.61
SNX17-209ENST00000494893 KRTAP17-1Q9BYP8 105 aa11.27□□□□□ -0.61
SNX17-209ENST00000494893 VCX2Q9H322 139 aa11.27□□□□□ -0.61
SNX17-209ENST00000494893 CDC42SE2Q9NRR3 84 aa11.27□□□□□ -0.61
SNX17-209ENST00000494893 KRTAP10-1P60331 282 aa11.26□□□□□ -0.61
SNX17-209ENST00000494893 PMVKQ15126 192 aa11.26□□□□□ -0.61
SNX17-209ENST00000494893 ZNF664Q8N3J9 261 aa11.26□□□□□ -0.61
SNX17-209ENST00000494893 AMELXQ99217 191 aa11.26□□□□□ -0.61
SNX17-209ENST00000494893 TRAV12-1A0A0B4J245 112 aa11.25□□□□□ -0.61
SNX17-209ENST00000494893 H0Y8G0 127 aa11.25□□□□□ -0.61
SNX17-209ENST00000494893 CST9LQ9H4G1 147 aa11.25□□□□□ -0.61
SNX17-209ENST00000494893 DNAH8Q96JB1 4490 aa11.25□□□□□ -0.61
SNX17-209ENST00000494893 IGLV10-54A0A075B6I4 117 aa11.24□□□□□ -0.61
SNX17-209ENST00000494893 ZC2HC1BQ5TFG8 222 aa11.24□□□□□ -0.61
SNX17-209ENST00000494893 TEX43Q6ZNM6 134 aa11.24□□□□□ -0.61
SNX17-209ENST00000494893 ODF1Q14990 250 aa11.23□□□□□ -0.61
SNX17-209ENST00000494893 JOSD1Q15040 202 aaPredicted RBP11.23□□□□□ -0.61
SNX17-209ENST00000494893 RNASE13Q5GAN3 156 aaKnown RBP11.23□□□□□ -0.61
SNX17-209ENST00000494893 LINC01545Q5VT33 79 aa11.23□□□□□ -0.61
SNX17-209ENST00000494893 NTN5Q8WTR8 489 aaPredicted RBP11.23□□□□□ -0.61
SNX17-209ENST00000494893 IGLV5-52A0A0A0MRZ9 124 aa11.22□□□□□ -0.61
SNX17-209ENST00000494893 C20orf202A1L168 122 aa11.22□□□□□ -0.61
SNX17-209ENST00000494893 CDK2AP2O75956 126 aa11.22□□□□□ -0.61
SNX17-209ENST00000494893 C2orf88Q9BSF0 95 aa11.22□□□□□ -0.61
SNX17-209ENST00000494893 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.21□□□□□ -0.61
SNX17-209ENST00000494893 CHTOPQ9Y3Y2 248 aaKnown RBP11.21□□□□□ -0.61
SNX17-209ENST00000494893 TRAV8-4A0A0B4J246 113 aa11.2□□□□□ -0.62
SNX17-209ENST00000494893 F8VRH5 84 aa11.2□□□□□ -0.62
SNX17-209ENST00000494893 SCGB1D1O95968 90 aa11.2□□□□□ -0.62
SNX17-209ENST00000494893 GCSHP23434 173 aa11.2□□□□□ -0.62
SNX17-209ENST00000494893 PYY3Q5JQD4 70 aa11.2□□□□□ -0.62
SNX17-209ENST00000494893 USP17L23D6RBM5 183 aa11.19□□□□□ -0.62
SNX17-209ENST00000494893 MRPL35Q9NZE8 188 aaKnown RBP11.19□□□□□ -0.62
SNX17-209ENST00000494893 IGKV3OR2-268A0A0C4DH90 116 aa11.18□□□□□ -0.62
SNX17-209ENST00000494893 UBE2D1P51668 147 aa11.18□□□□□ -0.62
SNX17-209ENST00000494893 PMCHL2Q9BQD1 86 aa11.18□□□□□ -0.62
SNX17-209ENST00000494893 IGLV4-69A0A075B6H9 119 aa11.17□□□□□ -0.62
SNX17-209ENST00000494893 XGP55808 180 aa11.17□□□□□ -0.62
SNX17-209ENST00000494893 TRAV13-1A0A0B4J241 112 aa11.16□□□□□ -0.62
SNX17-209ENST00000494893 A0A0J9YXV3 536 aa11.16□□□□□ -0.62
SNX17-209ENST00000494893 DPM2O94777 84 aa11.16□□□□□ -0.62
SNX17-209ENST00000494893 IGLC3P0DOY3 106 aa11.16□□□□□ -0.62
SNX17-209ENST00000494893 LINC01620Q4KN68 170 aa11.16□□□□□ -0.62
SNX17-209ENST00000494893 FAM19A3Q7Z5A8 133 aa11.16□□□□□ -0.62
SNX17-209ENST00000494893 LINC00959A0A1B0GUT2 108 aa11.15□□□□□ -0.62
SNX17-209ENST00000494893 GAGE12HA6NDE8 117 aa11.15□□□□□ -0.62
SNX17-209ENST00000494893 CCL25O15444 150 aa11.15□□□□□ -0.62
SNX17-209ENST00000494893 IGKCP01834 107 aa11.15□□□□□ -0.62
SNX17-209ENST00000494893 PLNP26678 52 aa11.15□□□□□ -0.62
SNX17-209ENST00000494893 CHCHD10Q8WYQ3 142 aaPredicted RBP11.15□□□□□ -0.62
SNX17-209ENST00000494893 FAM30AQ9NZY2 134 aa11.15□□□□□ -0.62
SNX17-209ENST00000494893 TINCRA0A1B0GVN0 87 aa11.14□□□□□ -0.63
SNX17-209ENST00000494893 C11orf86A6NJI1 115 aa11.14□□□□□ -0.63
SNX17-209ENST00000494893 SMIM6P0DI80 62 aa11.14□□□□□ -0.63
SNX17-209ENST00000494893 SEC11AP67812 179 aa11.14□□□□□ -0.63
SNX17-209ENST00000494893 LINC00242Q5T6M2 205 aa11.14□□□□□ -0.63
SNX17-209ENST00000494893 KRTAP4-5Q9BYR2 181 aa11.14□□□□□ -0.63
SNX17-209ENST00000494893 SS18Q15532 418 aa11.13□□□□□ -0.63
SNX17-209ENST00000494893 C14orf177Q52M58 125 aa11.13□□□□□ -0.63
SNX17-209ENST00000494893 CHAC1Q9BUX1 264 aa11.13□□□□□ -0.63
SNX17-209ENST00000494893 HAMPP81172 84 aa11.12□□□□□ -0.63
SNX17-209ENST00000494893 FOXI1Q12951 378 aa11.12□□□□□ -0.63
SNX17-209ENST00000494893 ATOH7Q8N100 152 aa11.12□□□□□ -0.63
SNX17-209ENST00000494893 C15orf56Q8N910 161 aa11.12□□□□□ -0.63
SNX17-209ENST00000494893 GEMIN7Q9H840 131 aaKnown RBP11.12□□□□□ -0.63
SNX17-209ENST00000494893 FAT1Q14517 4588 aa11.12□□□□□ -0.63
SNX17-209ENST00000494893 HERVK_113P63121 156 aa11.11□□□□□ -0.63
SNX17-209ENST00000494893 COX6A2Q02221 97 aa11.11□□□□□ -0.63
SNX17-209ENST00000494893 IGLV5-45A0A087WSX0 123 aa11.1□□□□□ -0.63
SNX17-209ENST00000494893 SLPIP03973 132 aa11.1□□□□□ -0.63
SNX17-209ENST00000494893 Q6ZSA8 131 aa11.1□□□□□ -0.63
SNX17-209ENST00000494893 ABCA13Q86UQ4 5058 aa11.1□□□□□ -0.63
SNX17-209ENST00000494893 ZNF22P17026 224 aaPredicted RBP11.09□□□□□ -0.63
SNX17-209ENST00000494893 XCL1P47992 114 aa11.09□□□□□ -0.63
SNX17-209ENST00000494893 TMEM170BQ5T4T1 132 aa11.08□□□□□ -0.64
SNX17-209ENST00000494893 LINC00469Q8N7U9 141 aa11.08□□□□□ -0.64
SNX17-209ENST00000494893 IGHV3OR16-9A0A0B4J2B5 98 aa11.07□□□□□ -0.64
SNX17-209ENST00000494893 hDV102S1A0JD36 115 aa11.07□□□□□ -0.64
SNX17-209ENST00000494893 CD164L2Q6UWJ8 174 aa11.07□□□□□ -0.64
SNX17-209ENST00000494893 STPG4Q8N801 248 aa11.07□□□□□ -0.64
SNX17-209ENST00000494893 CDKN2A-AS1Q9UH64 79 aa11.07□□□□□ -0.64
SNX17-209ENST00000494893 HSBP1L1C9JCN9 74 aa11.06□□□□□ -0.64
SNX17-209ENST00000494893 MAJINQ3KP22 176 aa11.06□□□□□ -0.64
SNX17-209ENST00000494893 Q8N1X5 172 aa11.06□□□□□ -0.64
SNX17-209ENST00000494893 VAMP8Q9BV40 100 aa11.06□□□□□ -0.64
SNX17-209ENST00000494893 TMEM223A0PJW6 202 aa11.05□□□□□ -0.64
SNX17-209ENST00000494893 H3BRM9 83 aa11.05□□□□□ -0.64
SNX17-209ENST00000494893 CNBPP62633 177 aaKnown RBP11.05□□□□□ -0.64
SNX17-209ENST00000494893 HIGD2BQ4VC39 106 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms