RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 CCL18P55774 89 aa14.05□□□□□ -0.16
KPNA1-210ENST00000494339 LINC00588Q9Y4M8 146 aa14.05□□□□□ -0.16
KPNA1-210ENST00000494339 LEPROTO15243 131 aa14.05□□□□□ -0.16
KPNA1-210ENST00000494339 HINT1P49773 126 aaPredicted RBP14.05□□□□□ -0.16
KPNA1-210ENST00000494339 LINC00269Q8N2A0 174 aa14.05□□□□□ -0.16
KPNA1-210ENST00000494339 LINC00469Q8N7U9 141 aa14.05□□□□□ -0.16
KPNA1-210ENST00000494339 H3BRM9 83 aa14.04□□□□□ -0.16
KPNA1-210ENST00000494339 BATFQ16520 125 aa14.04□□□□□ -0.16
KPNA1-210ENST00000494339 LINC00242Q5T6M2 205 aa14.04□□□□□ -0.16
KPNA1-210ENST00000494339 PLEKHB2Q96CS7 222 aa14.04□□□□□ -0.16
KPNA1-210ENST00000494339 APLNQ9ULZ1 77 aa14.03□□□□□ -0.16
KPNA1-210ENST00000494339 ZNF815PA8K554 130 aa14.03□□□□□ -0.16
KPNA1-210ENST00000494339 J3QQQ9 107 aa14.03□□□□□ -0.16
KPNA1-210ENST00000494339 KLK5Q9Y337 293 aaPredicted RBP14.03□□□□□ -0.16
KPNA1-210ENST00000494339 LGALS3P17931 250 aaKnown RBP14.02□□□□□ -0.16
KPNA1-210ENST00000494339 COX6A2Q02221 97 aa14.02□□□□□ -0.16
KPNA1-210ENST00000494339 HSD52Q0P140 79 aa14.02□□□□□ -0.16
KPNA1-210ENST00000494339 KLK12Q9UKR0 248 aa14.02□□□□□ -0.16
KPNA1-210ENST00000494339 REG3AQ06141 175 aa14.01□□□□□ -0.17
KPNA1-210ENST00000494339 ZFAND6Q6FIF0 208 aa14.01□□□□□ -0.17
KPNA1-210ENST00000494339 CDKN2A-AS1Q9UH64 79 aa14.01□□□□□ -0.17
KPNA1-210ENST00000494339 CSMD3Q7Z407 3707 aa14.01□□□□□ -0.17
KPNA1-210ENST00000494339 DNAH7Q8WXX0 4024 aa14□□□□□ -0.17
KPNA1-210ENST00000494339 IGHV1-58A0A0C4DH39 117 aa14□□□□□ -0.17
KPNA1-210ENST00000494339 LINC00959A0A1B0GUT2 108 aa14□□□□□ -0.17
KPNA1-210ENST00000494339 BVES-AS1Q5T3Y7 98 aa14□□□□□ -0.17
KPNA1-210ENST00000494339 TSPEAR-AS2P59090 65 aa14□□□□□ -0.17
KPNA1-210ENST00000494339 COL5A1-AS1Q5SY13 56 aa14□□□□□ -0.17
KPNA1-210ENST00000494339 LINC01556Q5JQF7 62 aa13.98□□□□□ -0.17
KPNA1-210ENST00000494339 IGHV3-64A0A075B6Q5 118 aa13.97□□□□□ -0.17
KPNA1-210ENST00000494339 SS18Q15532 418 aa13.97□□□□□ -0.17
KPNA1-210ENST00000494339 TAL2Q16559 108 aa13.97□□□□□ -0.17
KPNA1-210ENST00000494339 SCGB1D4Q6XE38 83 aa13.97□□□□□ -0.17
KPNA1-210ENST00000494339 TRAV8-3A0A0A6YYJ7 113 aa13.96□□□□□ -0.17
KPNA1-210ENST00000494339 SPINK8P0C7L1 97 aa13.96□□□□□ -0.17
KPNA1-210ENST00000494339 IGLV10-54A0A075B6I4 117 aa13.96□□□□□ -0.18
KPNA1-210ENST00000494339 CCL25O15444 150 aa13.96□□□□□ -0.18
KPNA1-210ENST00000494339 XCL1P47992 114 aa13.96□□□□□ -0.18
KPNA1-210ENST00000494339 UBE2WQ96B02 151 aa13.96□□□□□ -0.18
KPNA1-210ENST00000494339 PRR34Q9NV39 138 aa13.96□□□□□ -0.18
KPNA1-210ENST00000494339 DYNC2H1Q8NCM8 4307 aaKnown RBP13.95□□□□□ -0.18
KPNA1-210ENST00000494339 DNAH10OSP0CZ25 163 aa13.95□□□□□ -0.18
KPNA1-210ENST00000494339 ENHOQ6UWT2 76 aa13.95□□□□□ -0.18
KPNA1-210ENST00000494339 CRPP02741 224 aa13.94□□□□□ -0.18
KPNA1-210ENST00000494339 UBE2DNLQ8IWF7 75 aa13.94□□□□□ -0.18
KPNA1-210ENST00000494339 UPK3BQ9BT76 320 aa13.94□□□□□ -0.18
KPNA1-210ENST00000494339 IGLV5-39A0A0G2JS06 123 aa13.94□□□□□ -0.18
KPNA1-210ENST00000494339 MUC7Q8TAX7 377 aa13.94□□□□□ -0.18
KPNA1-210ENST00000494339 ORAOV1Q8WV07 137 aa13.94□□□□□ -0.18
KPNA1-210ENST00000494339 CHCHD10Q8WYQ3 142 aaPredicted RBP13.92□□□□□ -0.18
KPNA1-210ENST00000494339 STARD9Q9P2P6 4700 aa13.92□□□□□ -0.18
KPNA1-210ENST00000494339 IGHV3OR16-9A0A0B4J2B5 98 aa13.92□□□□□ -0.18
KPNA1-210ENST00000494339 SMIM1B2RUZ4 78 aa13.92□□□□□ -0.18
KPNA1-210ENST00000494339 HIST1H4GQ99525 98 aa13.92□□□□□ -0.18
KPNA1-210ENST00000494339 Q9H8V8 135 aa13.92□□□□□ -0.18
KPNA1-210ENST00000494339 TENM2Q9NT68 2774 aa13.91□□□□□ -0.18
KPNA1-210ENST00000494339 C5orf38Q86SI9 138 aa13.9□□□□□ -0.18
KPNA1-210ENST00000494339 CEND1Q8N111 149 aa13.9□□□□□ -0.18
KPNA1-210ENST00000494339 WWC2-AS2Q96NR7 200 aa13.9□□□□□ -0.18
KPNA1-210ENST00000494339 TM2D2Q9BX73 214 aa13.9□□□□□ -0.18
KPNA1-210ENST00000494339 NDUFA12Q9UI09 145 aa13.9□□□□□ -0.18
KPNA1-210ENST00000494339 LYSTQ99698 3801 aa13.89□□□□□ -0.19
KPNA1-210ENST00000494339 A6NDN8 102 aa13.89□□□□□ -0.19
KPNA1-210ENST00000494339 GCSHP23434 173 aa13.89□□□□□ -0.19
KPNA1-210ENST00000494339 SPANXB1Q9NS25 103 aaPredicted RBP13.89□□□□□ -0.19
KPNA1-210ENST00000494339 PLECQ15149 4684 aaKnown RBP13.88□□□□□ -0.19
KPNA1-210ENST00000494339 MIAQ16674 131 aa13.88□□□□□ -0.19
KPNA1-210ENST00000494339 CD164L2Q6UWJ8 174 aa13.88□□□□□ -0.19
KPNA1-210ENST00000494339 A0A087WZ39 114 aa13.87□□□□□ -0.19
KPNA1-210ENST00000494339 SRSF9Q13242 221 aaKnown RBP eCLIP13.87□□□□□ -0.19
KPNA1-210ENST00000494339 C10orf126Q8N4M7 172 aa13.86□□□□□ -0.19
KPNA1-210ENST00000494339 GAGE12HA6NDE8 117 aa13.86□□□□□ -0.19
KPNA1-210ENST00000494339 NDUFA1O15239 70 aa13.86□□□□□ -0.19
KPNA1-210ENST00000494339 TRAV8-4A0A0B4J246 113 aa13.85□□□□□ -0.19
KPNA1-210ENST00000494339 A0A0J9YXY3 114 aa13.85□□□□□ -0.19
KPNA1-210ENST00000494339 A0A1B0GV90 55 aa13.85□□□□□ -0.19
KPNA1-210ENST00000494339 Q9HAA7 133 aa13.85□□□□□ -0.19
KPNA1-210ENST00000494339 TMEM238C9JI98 176 aa13.84□□□□□ -0.19
KPNA1-210ENST00000494339 PTTG1IPP53801 180 aa13.84□□□□□ -0.19
KPNA1-210ENST00000494339 FXYD2P54710 66 aa13.84□□□□□ -0.19
KPNA1-210ENST00000494339 FOXI1Q12951 378 aa13.84□□□□□ -0.19
KPNA1-210ENST00000494339 LINC01561Q8N1V8 128 aa13.84□□□□□ -0.19
KPNA1-210ENST00000494339 COX7A2LO14548 114 aa13.83□□□□□ -0.2
KPNA1-210ENST00000494339 IBA57-AS1B1ANH7 110 aa13.82□□□□□ -0.2
KPNA1-210ENST00000494339 C1orf43Q9BWL3 253 aa13.82□□□□□ -0.2
KPNA1-210ENST00000494339 IGKV2D-24A0A075B6R9 120 aa13.8□□□□□ -0.2
KPNA1-210ENST00000494339 TIMM17BO60830 172 aa13.8□□□□□ -0.2
KPNA1-210ENST00000494339 MALP21145 153 aa13.8□□□□□ -0.2
KPNA1-210ENST00000494339 COX7B2Q8TF08 81 aa13.8□□□□□ -0.2
KPNA1-210ENST00000494339 TOMM7Q9P0U1 55 aa13.8□□□□□ -0.2
KPNA1-210ENST00000494339 TMEM238LA0A1B0GVL6 79 aa13.8□□□□□ -0.2
KPNA1-210ENST00000494339 A6NJY4 79 aa13.8□□□□□ -0.2
KPNA1-210ENST00000494339 HERV-K104P63124 156 aa13.8□□□□□ -0.2
KPNA1-210ENST00000494339 KRTAP1-5Q9BYS1 174 aa13.8□□□□□ -0.2
KPNA1-210ENST00000494339 TAX1BP3O14907 124 aa13.79□□□□□ -0.2
KPNA1-210ENST00000494339 KRTAP26-1Q6PEX3 210 aa13.79□□□□□ -0.2
KPNA1-210ENST00000494339 Q6ZVH6 145 aa13.79□□□□□ -0.2
KPNA1-210ENST00000494339 ZNF625Q96I27 306 aaPredicted RBP13.79□□□□□ -0.2
KPNA1-210ENST00000494339 SMIM13P0DJ93 91 aa13.78□□□□□ -0.2
KPNA1-210ENST00000494339 CASC10Q5T4H9 136 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms