RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 DEFB104AQ8WTQ1 72 aa3.64□□□□□ -1.83
NEK4-205ENST00000493199 COPS9Q8WXC6 57 aa3.64□□□□□ -1.83
NEK4-205ENST00000493199 LINC00476Q8WZB0 136 aa3.64□□□□□ -1.83
NEK4-205ENST00000493199 AMELXQ99217 191 aa3.64□□□□□ -1.83
NEK4-205ENST00000493199 HIST1H2BLQ99880 126 aa3.64□□□□□ -1.83
NEK4-205ENST00000493199 PRR34Q9NV39 138 aa3.64□□□□□ -1.83
NEK4-205ENST00000493199 EPPK1P58107 5090 aaKnown RBP3.64□□□□□ -1.83
NEK4-205ENST00000493199 DYNC2H1Q8NCM8 4307 aaKnown RBP3.63□□□□□ -1.83
NEK4-205ENST00000493199 IGHV1-58A0A0C4DH39 117 aa3.63□□□□□ -1.83
NEK4-205ENST00000493199 C11orf86A6NJI1 115 aa3.63□□□□□ -1.83
NEK4-205ENST00000493199 C3orf79P0CE67 100 aa3.63□□□□□ -1.83
NEK4-205ENST00000493199 CKS1BP61024 79 aa3.63□□□□□ -1.83
NEK4-205ENST00000493199 FAM19A3Q7Z5A8 133 aa3.63□□□□□ -1.83
NEK4-205ENST00000493199 C6orf223Q8N319 242 aa3.63□□□□□ -1.83
NEK4-205ENST00000493199 CHCHD10Q8WYQ3 142 aaPredicted RBP3.63□□□□□ -1.83
NEK4-205ENST00000493199 URB1-AS1Q96HZ7 61 aa3.63□□□□□ -1.83
NEK4-205ENST00000493199 CHAC1Q9BUX1 264 aa3.63□□□□□ -1.83
NEK4-205ENST00000493199 Q9HAA7 133 aa3.63□□□□□ -1.83
NEK4-205ENST00000493199 SACSQ9NZJ4 4579 aa3.62□□□□□ -1.83
NEK4-205ENST00000493199 IGLV4-60A0A075B6I1 120 aa3.62□□□□□ -1.83
NEK4-205ENST00000493199 LGALS3P17931 250 aaKnown RBP3.62□□□□□ -1.83
NEK4-205ENST00000493199 XCL1P47992 114 aa3.62□□□□□ -1.83
NEK4-205ENST00000493199 NMUP48645 174 aa3.62□□□□□ -1.83
NEK4-205ENST00000493199 UBE2D1P51668 147 aa3.62□□□□□ -1.83
NEK4-205ENST00000493199 LINC01545Q5VT33 79 aa3.62□□□□□ -1.83
NEK4-205ENST00000493199 Q6ZUT4 128 aa3.62□□□□□ -1.83
NEK4-205ENST00000493199 PLEKHB2Q96CS7 222 aa3.62□□□□□ -1.83
NEK4-205ENST00000493199 VAMP8Q9BV40 100 aa3.62□□□□□ -1.83
NEK4-205ENST00000493199 IGLV10-54A0A075B6I4 117 aa3.61□□□□□ -1.83
NEK4-205ENST00000493199 A0A087WZ39 114 aa3.61□□□□□ -1.83
NEK4-205ENST00000493199 A0A096LNJ9 63 aa3.61□□□□□ -1.83
NEK4-205ENST00000493199 A0A0J9YXV3 536 aa3.61□□□□□ -1.83
NEK4-205ENST00000493199 MYMXA0A1B0GTQ4 84 aa3.61□□□□□ -1.83
NEK4-205ENST00000493199 GAGE12HA6NDE8 117 aa3.61□□□□□ -1.83
NEK4-205ENST00000493199 NUPR1O60356 82 aa3.61□□□□□ -1.83
NEK4-205ENST00000493199 IGLC3P0DOY3 106 aa3.61□□□□□ -1.83
NEK4-205ENST00000493199 HERV-K104P63124 156 aa3.61□□□□□ -1.83
NEK4-205ENST00000493199 ODF1Q14990 250 aa3.61□□□□□ -1.83
NEK4-205ENST00000493199 JOSD1Q15040 202 aaPredicted RBP3.61□□□□□ -1.83
NEK4-205ENST00000493199 CLPSL2Q6UWE3 100 aa3.61□□□□□ -1.83
NEK4-205ENST00000493199 ENHOQ6UWT2 76 aa3.61□□□□□ -1.83
NEK4-205ENST00000493199 LINC00336Q6ZUF6 198 aa3.61□□□□□ -1.83
NEK4-205ENST00000493199 MRPL35Q9NZE8 188 aaKnown RBP3.61□□□□□ -1.83
NEK4-205ENST00000493199 LCE6AA0A183 80 aa3.6□□□□□ -1.83
NEK4-205ENST00000493199 M0R2N4 97 aa3.6□□□□□ -1.83
NEK4-205ENST00000493199 NDUFA1O15239 70 aa3.6□□□□□ -1.83
NEK4-205ENST00000493199 SMIM6P0DI80 62 aa3.6□□□□□ -1.83
NEK4-205ENST00000493199 RNASE13Q5GAN3 156 aaKnown RBP3.6□□□□□ -1.83
NEK4-205ENST00000493199 LINC00242Q5T6M2 205 aa3.6□□□□□ -1.83
NEK4-205ENST00000493199 ZC2HC1BQ5TFG8 222 aa3.6□□□□□ -1.83
NEK4-205ENST00000493199 OPRPNQ99935 248 aaPredicted RBP3.6□□□□□ -1.83
NEK4-205ENST00000493199 PMCHL2Q9BQD1 86 aa3.6□□□□□ -1.83
NEK4-205ENST00000493199 TOMM7Q9P0U1 55 aa3.6□□□□□ -1.83
NEK4-205ENST00000493199 DNAH1Q9P2D7 4330 aa3.59□□□□□ -1.83
NEK4-205ENST00000493199 IGLV5-45A0A087WSX0 123 aa3.59□□□□□ -1.83
NEK4-205ENST00000493199 IGHV3OR16-9A0A0B4J2B5 98 aa3.59□□□□□ -1.83
NEK4-205ENST00000493199 TSTD3H0UI37 97 aa3.59□□□□□ -1.83
NEK4-205ENST00000493199 LEPROTO15243 131 aa3.59□□□□□ -1.83
NEK4-205ENST00000493199 LINC00310P59036 64 aa3.59□□□□□ -1.83
NEK4-205ENST00000493199 SCGB1D4Q6XE38 83 aa3.59□□□□□ -1.83
NEK4-205ENST00000493199 C5orf38Q86SI9 138 aa3.59□□□□□ -1.83
NEK4-205ENST00000493199 Q8IZM0 81 aa3.59□□□□□ -1.83
NEK4-205ENST00000493199 COX7B2Q8TF08 81 aa3.59□□□□□ -1.83
NEK4-205ENST00000493199 ORAOV1Q8WV07 137 aa3.59□□□□□ -1.83
NEK4-205ENST00000493199 C2orf48Q96LS8 159 aa3.59□□□□□ -1.83
NEK4-205ENST00000493199 CAMK2N2Q96S95 79 aa3.59□□□□□ -1.83
NEK4-205ENST00000493199 MIEN1Q9BRT3 115 aa3.59□□□□□ -1.83
NEK4-205ENST00000493199 HUWE1Q7Z6Z7 4374 aaKnown RBP3.58□□□□□ -1.84
NEK4-205ENST00000493199 IGLV4-69A0A075B6H9 119 aa3.58□□□□□ -1.84
NEK4-205ENST00000493199 IGHV3-64A0A075B6Q5 118 aa3.58□□□□□ -1.84
NEK4-205ENST00000493199 hDV102S1A0JD36 115 aa3.58□□□□□ -1.84
NEK4-205ENST00000493199 TMEM223A0PJW6 202 aa3.58□□□□□ -1.84
NEK4-205ENST00000493199 E9PLD3 99 aa3.58□□□□□ -1.84
NEK4-205ENST00000493199 J3QQQ9 107 aa3.58□□□□□ -1.84
NEK4-205ENST00000493199 ZNF22P17026 224 aaPredicted RBP3.58□□□□□ -1.84
NEK4-205ENST00000493199 SPAG11BQ08648 103 aa3.58□□□□□ -1.84
NEK4-205ENST00000493199 COX17Q14061 63 aa3.58□□□□□ -1.84
NEK4-205ENST00000493199 MEIG1Q5JSS6 88 aa3.58□□□□□ -1.84
NEK4-205ENST00000493199 Q6ZVH6 145 aa3.58□□□□□ -1.84
NEK4-205ENST00000493199 BOD1L2Q8IYS8 172 aa3.58□□□□□ -1.84
NEK4-205ENST00000493199 NTN5Q8WTR8 489 aaPredicted RBP3.58□□□□□ -1.84
NEK4-205ENST00000493199 PGPEP1Q9NXJ5 209 aa3.58□□□□□ -1.84
NEK4-205ENST00000493199 LINC00474Q9P2X8 69 aa3.58□□□□□ -1.84
NEK4-205ENST00000493199 CDKN2A-AS1Q9UH64 79 aa3.58□□□□□ -1.84
NEK4-205ENST00000493199 CBY1Q9Y3M2 126 aa3.58□□□□□ -1.84
NEK4-205ENST00000493199 TRBV30A0A0K0K1B3 111 aa3.57□□□□□ -1.84
NEK4-205ENST00000493199 TMEM238C9JI98 176 aa3.57□□□□□ -1.84
NEK4-205ENST00000493199 FOXI1Q12951 378 aa3.57□□□□□ -1.84
NEK4-205ENST00000493199 SPATA45Q537H7 98 aa3.57□□□□□ -1.84
NEK4-205ENST00000493199 Q6ZR54 194 aa3.57□□□□□ -1.84
NEK4-205ENST00000493199 LINC00173Q6ZV60 143 aa3.57□□□□□ -1.84
NEK4-205ENST00000493199 DPH3Q96FX2 82 aa3.57□□□□□ -1.84
NEK4-205ENST00000493199 GVQW2A0A096LPI5 108 aaPredicted RBP3.56□□□□□ -1.84
NEK4-205ENST00000493199 ZNF815PA8K554 130 aa3.56□□□□□ -1.84
NEK4-205ENST00000493199 SMIM1B2RUZ4 78 aa3.56□□□□□ -1.84
NEK4-205ENST00000493199 USP17L23D6RBM5 183 aa3.56□□□□□ -1.84
NEK4-205ENST00000493199 SPINK8P0C7L1 97 aa3.56□□□□□ -1.84
NEK4-205ENST00000493199 SYCNQ0VAF6 134 aa3.56□□□□□ -1.84
NEK4-205ENST00000493199 SRSF9Q13242 221 aaKnown RBP eCLIP3.56□□□□□ -1.84
NEK4-205ENST00000493199 RNF151Q2KHN1 245 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms