RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 TRAV12-1A0A0B4J245 112 aa2.65□□□□□ -1.99
BRCA1-220ENST00000492859 M0R3E3 92 aa2.65□□□□□ -1.99
BRCA1-220ENST00000492859 SPINK4O60575 86 aa2.65□□□□□ -1.99
BRCA1-220ENST00000492859 SPAG11BQ08648 103 aa2.65□□□□□ -1.99
BRCA1-220ENST00000492859 NREPQ16612 68 aa2.65□□□□□ -1.99
BRCA1-220ENST00000492859 C1orf137Q5JT78 98 aa2.65□□□□□ -1.99
BRCA1-220ENST00000492859 SPAG11AQ6PDA7 123 aa2.65□□□□□ -1.99
BRCA1-220ENST00000492859 LITAFQ99732 161 aa2.65□□□□□ -1.99
BRCA1-220ENST00000492859 RNF5Q99942 180 aa2.65□□□□□ -1.99
BRCA1-220ENST00000492859 TTTY12Q9BZ98 90 aa2.65□□□□□ -1.99
BRCA1-220ENST00000492859 PLAC8Q9NZF1 115 aa2.65□□□□□ -1.99
BRCA1-220ENST00000492859 KLK12Q9UKR0 248 aa2.65□□□□□ -1.99
BRCA1-220ENST00000492859 C4BP0C0L5 1744 aa2.64□□□□□ -1.99
BRCA1-220ENST00000492859 A0A1B0GU33 70 aa2.64□□□□□ -1.99
BRCA1-220ENST00000492859 PLNP26678 52 aa2.64□□□□□ -1.99
BRCA1-220ENST00000492859 FXYD6P3P58550 94 aa2.64□□□□□ -1.99
BRCA1-220ENST00000492859 C9orf163Q8N9P6 203 aa2.64□□□□□ -1.99
BRCA1-220ENST00000492859 WFDC6Q9BQY6 131 aa2.64□□□□□ -1.99
BRCA1-220ENST00000492859 RP1P56715 2156 aa2.64□□□□□ -1.99
BRCA1-220ENST00000492859 CUL9Q8IWT3 2517 aa2.64□□□□□ -1.99
BRCA1-220ENST00000492859 A0A1B0GUV1 79 aa2.63□□□□□ -1.99
BRCA1-220ENST00000492859 J3QRE1 110 aa2.63□□□□□ -1.99
BRCA1-220ENST00000492859 IGLV7-43P04211 117 aa2.63□□□□□ -1.99
BRCA1-220ENST00000492859 IL9P15248 144 aa2.63□□□□□ -1.99
BRCA1-220ENST00000492859 KRTAP25-1Q3LHN0 102 aa2.63□□□□□ -1.99
BRCA1-220ENST00000492859 FAM74A4Q5TZK3 123 aa2.63□□□□□ -1.99
BRCA1-220ENST00000492859 Q5W150 140 aa2.63□□□□□ -1.99
BRCA1-220ENST00000492859 LYPD1Q8N2G4 141 aa2.63□□□□□ -1.99
BRCA1-220ENST00000492859 DMAC1Q96GE9 116 aa2.63□□□□□ -1.99
BRCA1-220ENST00000492859 OBSCN-AS1Q96MR7 158 aa2.63□□□□□ -1.99
BRCA1-220ENST00000492859 MRPL36Q9P0J6 103 aaKnown RBP2.63□□□□□ -1.99
BRCA1-220ENST00000492859 CACNA1IQ9P0X4 2223 aa2.63□□□□□ -1.99
BRCA1-220ENST00000492859 PRRC2AP48634 2157 aaKnown RBP2.63□□□□□ -1.99
BRCA1-220ENST00000492859 IGKV3-7A0A075B6H7 116 aa2.62□□□□□ -1.99
BRCA1-220ENST00000492859 A0A1B0GUT8 65 aa2.62□□□□□ -1.99
BRCA1-220ENST00000492859 NUPR2A6NF83 97 aa2.62□□□□□ -1.99
BRCA1-220ENST00000492859 ERHP84090 104 aaKnown RBP2.62□□□□□ -1.99
BRCA1-220ENST00000492859 ENHOQ6UWT2 76 aa2.62□□□□□ -1.99
BRCA1-220ENST00000492859 Q86TA4 180 aa2.62□□□□□ -1.99
BRCA1-220ENST00000492859 LINC01558Q9Y6Z2 57 aa2.62□□□□□ -1.99
BRCA1-220ENST00000492859 ABCA4P78363 2273 aa2.62□□□□□ -1.99
BRCA1-220ENST00000492859 GOLGA4Q13439 2230 aaKnown RBP2.62□□□□□ -1.99
BRCA1-220ENST00000492859 COX6B1P14854 86 aa2.61□□□□□ -1.99
BRCA1-220ENST00000492859 CNBPP62633 177 aaKnown RBP2.61□□□□□ -1.99
BRCA1-220ENST00000492859 CACNA1DQ01668 2161 aa2.61□□□□□ -1.99
BRCA1-220ENST00000492859 KRTAP15-1Q3LI76 137 aa2.61□□□□□ -1.99
BRCA1-220ENST00000492859 C9orf47Q6ZRZ4 202 aa2.61□□□□□ -1.99
BRCA1-220ENST00000492859 LCE6AA0A183 80 aa2.61□□□□□ -1.99
BRCA1-220ENST00000492859 LINC01546A6NGU7 62 aa2.61□□□□□ -1.99
BRCA1-220ENST00000492859 M0R135 149 aa2.61□□□□□ -1.99
BRCA1-220ENST00000492859 AMELXQ99217 191 aa2.61□□□□□ -1.99
BRCA1-220ENST00000492859 COL27A1Q8IZC6 1860 aaPredicted RBP2.6□□□□□ -1.99
BRCA1-220ENST00000492859 TRBV6-6A0A0A6YYG2 114 aa2.6□□□□□ -1.99
BRCA1-220ENST00000492859 TRAV21A0A0B4J279 112 aa2.6□□□□□ -1.99
BRCA1-220ENST00000492859 A0A0J9YX75 114 aa2.6□□□□□ -1.99
BRCA1-220ENST00000492859 F8VRH5 84 aa2.6□□□□□ -1.99
BRCA1-220ENST00000492859 DEFB116Q30KQ4 102 aa2.6□□□□□ -1.99
BRCA1-220ENST00000492859 UBALD1Q8TB05 177 aa2.6□□□□□ -1.99
BRCA1-220ENST00000492859 TIMM8BQ9Y5J9 83 aaPredicted RBP2.6□□□□□ -1.99
BRCA1-220ENST00000492859 SDK1Q7Z5N4 2213 aa2.6□□□□□ -1.99
BRCA1-220ENST00000492859 PRR14LQ5THK1 2151 aa2.6□□□□□ -1.99
BRCA1-220ENST00000492859 UNC13CQ8NB66 2214 aa2.59□□□□□ -1.99
BRCA1-220ENST00000492859 A0A1W2PNU3 283 aaPredicted RBP2.59□□□□□ -1.99
BRCA1-220ENST00000492859 PIN1P1O15428 100 aa2.59□□□□□ -1.99
BRCA1-220ENST00000492859 SPINK7P58062 85 aa2.59□□□□□ -1.99
BRCA1-220ENST00000492859 FXYD3Q14802 87 aa2.59□□□□□ -1.99
BRCA1-220ENST00000492859 ZCCHC13Q8WW36 166 aaKnown RBP2.59□□□□□ -1.99
BRCA1-220ENST00000492859 IGIPA6NJ69 53 aa2.58□□□□□ -2
BRCA1-220ENST00000492859 IGKV3-20P01619 116 aa2.58□□□□□ -2
BRCA1-220ENST00000492859 CCL3L1P16619 93 aa2.58□□□□□ -2
BRCA1-220ENST00000492859 CCL18P55774 89 aa2.58□□□□□ -2
BRCA1-220ENST00000492859 ST20-AS1Q8NBB2 130 aa2.58□□□□□ -2
BRCA1-220ENST00000492859 COX7B2Q8TF08 81 aa2.58□□□□□ -2
BRCA1-220ENST00000492859 LINC00208Q96KT6 92 aa2.58□□□□□ -2
BRCA1-220ENST00000492859 UBL5Q9BZL1 73 aa2.58□□□□□ -2
BRCA1-220ENST00000492859 FREM1Q5H8C1 2179 aa2.58□□□□□ -2
BRCA1-220ENST00000492859 SPAG17Q6Q759 2223 aa2.58□□□□□ -2
BRCA1-220ENST00000492859 CEP192Q8TEP8 1941 aa2.58□□□□□ -2
BRCA1-220ENST00000492859 TRAV40A0A0B4J280 105 aa2.57□□□□□ -2
BRCA1-220ENST00000492859 I3L3M4 83 aa2.57□□□□□ -2
BRCA1-220ENST00000492859 M0R1W7 72 aa2.57□□□□□ -2
BRCA1-220ENST00000492859 NDUFB1O75438 58 aa2.57□□□□□ -2
BRCA1-220ENST00000492859 WFDC9Q8NEX5 89 aa2.57□□□□□ -2
BRCA1-220ENST00000492859 TYMSOSQ8TAI1 123 aa2.57□□□□□ -2
BRCA1-220ENST00000492859 GFRA4Q9GZZ7 299 aa2.57□□□□□ -2
BRCA1-220ENST00000492859 COL4A5P29400 1685 aa2.57□□□□□ -2
BRCA1-220ENST00000492859 IGKV3D-15A0A087WSY6 115 aa2.57□□□□□ -2
BRCA1-220ENST00000492859 IGKV3OR2-268A0A0C4DH90 116 aa2.57□□□□□ -2
BRCA1-220ENST00000492859 FAM168BA1KXE4 195 aa2.57□□□□□ -2
BRCA1-220ENST00000492859 PDE6HQ13956 83 aa2.57□□□□□ -2
BRCA1-220ENST00000492859 TMEM14CQ9P0S9 112 aa2.57□□□□□ -2
BRCA1-220ENST00000492859 ZFHX3Q15911 3703 aa2.56□□□□□ -2
BRCA1-220ENST00000492859 CTSGP08311 255 aa2.56□□□□□ -2
BRCA1-220ENST00000492859 HIGD2AQ9BW72 106 aa2.56□□□□□ -2
BRCA1-220ENST00000492859 R4GMQ9 66 aa2.56□□□□□ -2
BRCA1-220ENST00000492859 H0Y9P7 68 aa2.55□□□□□ -2
BRCA1-220ENST00000492859 ARL14EPLP0DKL9 152 aa2.55□□□□□ -2
BRCA1-220ENST00000492859 ZNF137PP52743 207 aa2.55□□□□□ -2
BRCA1-220ENST00000492859 HCP5Q6MZN7 132 aa2.55□□□□□ -2
BRCA1-220ENST00000492859 SPRR4Q96PI1 79 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms