RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 RPL39P62891 51 aaKnown RBP12.56□□□□□ -0.4
NELFE-212ENST00000492539 CBLN2Q8IUK8 224 aa12.56□□□□□ -0.4
NELFE-212ENST00000492539 TRAPPC1Q9Y5R8 145 aa12.56□□□□□ -0.4
NELFE-212ENST00000492539 IGKV3OR2-268A0A0C4DH90 116 aa12.55□□□□□ -0.4
NELFE-212ENST00000492539 IFI27P40305 119 aaPredicted RBP12.55□□□□□ -0.4
NELFE-212ENST00000492539 SPANXA1Q9NS26 97 aa12.55□□□□□ -0.4
NELFE-212ENST00000492539 ORMDL2Q53FV1 153 aa12.54□□□□□ -0.4
NELFE-212ENST00000492539 GAGE12HA6NDE8 117 aa12.53□□□□□ -0.4
NELFE-212ENST00000492539 C7orf33Q8WU49 177 aa12.53□□□□□ -0.4
NELFE-212ENST00000492539 LINC00959A0A1B0GUT2 108 aa12.52□□□□□ -0.41
NELFE-212ENST00000492539 COX6A2Q02221 97 aa12.52□□□□□ -0.41
NELFE-212ENST00000492539 CFAP161Q6P656 301 aa12.52□□□□□ -0.41
NELFE-212ENST00000492539 Q6ZUT4 128 aa12.52□□□□□ -0.41
NELFE-212ENST00000492539 CHCHD10Q8WYQ3 142 aaPredicted RBP12.52□□□□□ -0.41
NELFE-212ENST00000492539 MRPS36P82909 103 aaKnown RBP12.51□□□□□ -0.41
NELFE-212ENST00000492539 PRSS3P2Q8NHM4 247 aa12.51□□□□□ -0.41
NELFE-212ENST00000492539 PYGO1Q9Y3Y4 419 aa12.51□□□□□ -0.41
NELFE-212ENST00000492539 LINC01546A6NGU7 62 aa12.5□□□□□ -0.41
NELFE-212ENST00000492539 C2orf66Q6UXQ4 117 aa12.5□□□□□ -0.41
NELFE-212ENST00000492539 FAM104AQ969W3 186 aa12.5□□□□□ -0.41
NELFE-212ENST00000492539 CYSLTR1Q9Y271 337 aa12.5□□□□□ -0.41
NELFE-212ENST00000492539 SS18Q15532 418 aa12.49□□□□□ -0.41
NELFE-212ENST00000492539 HIGD2BQ4VC39 106 aa12.49□□□□□ -0.41
NELFE-212ENST00000492539 RNASE13Q5GAN3 156 aaKnown RBP12.49□□□□□ -0.41
NELFE-212ENST00000492539 LINC01600Q96MT4 127 aa12.49□□□□□ -0.41
NELFE-212ENST00000492539 GVQW2A0A096LPI5 108 aaPredicted RBP12.48□□□□□ -0.41
NELFE-212ENST00000492539 CCL25O15444 150 aa12.48□□□□□ -0.41
NELFE-212ENST00000492539 G0S2P27469 103 aa12.48□□□□□ -0.41
NELFE-212ENST00000492539 MAJINQ3KP22 176 aa12.48□□□□□ -0.41
NELFE-212ENST00000492539 PRR3P79522 188 aaKnown RBP12.47□□□□□ -0.41
NELFE-212ENST00000492539 OPRPNQ99935 248 aaPredicted RBP12.47□□□□□ -0.41
NELFE-212ENST00000492539 IGKV2-24A0A0C4DH68 120 aa12.46□□□□□ -0.41
NELFE-212ENST00000492539 C1orf196B1AJZ1 125 aa12.46□□□□□ -0.41
NELFE-212ENST00000492539 XCL1P47992 114 aa12.46□□□□□ -0.41
NELFE-212ENST00000492539 FOXI1Q12951 378 aa12.46□□□□□ -0.41
NELFE-212ENST00000492539 FA2HQ7L5A8 372 aa12.46□□□□□ -0.41
NELFE-212ENST00000492539 C18orf32Q8TCD1 76 aa12.46□□□□□ -0.41
NELFE-212ENST00000492539 IGLV4-3A0A075B6K6 122 aa12.45□□□□□ -0.42
NELFE-212ENST00000492539 TRAV13-1A0A0B4J241 112 aa12.45□□□□□ -0.42
NELFE-212ENST00000492539 NPSP0C0P6 89 aa12.45□□□□□ -0.42
NELFE-212ENST00000492539 CD164L2Q6UWJ8 174 aa12.45□□□□□ -0.42
NELFE-212ENST00000492539 STPG4Q8N801 248 aa12.45□□□□□ -0.42
NELFE-212ENST00000492539 A0A096LNI7 61 aa12.44□□□□□ -0.42
NELFE-212ENST00000492539 TOMM6Q96B49 74 aa12.44□□□□□ -0.42
NELFE-212ENST00000492539 TMEM141Q96I45 108 aa12.44□□□□□ -0.42
NELFE-212ENST00000492539 IGIPA6NJ69 53 aa12.43□□□□□ -0.42
NELFE-212ENST00000492539 LINC01549A6NIU2 74 aa12.42□□□□□ -0.42
NELFE-212ENST00000492539 IFITM10A6NMD0 228 aa12.42□□□□□ -0.42
NELFE-212ENST00000492539 COLCA2A8K830 154 aa12.42□□□□□ -0.42
NELFE-212ENST00000492539 TIMM17AQ99595 171 aa12.42□□□□□ -0.42
NELFE-212ENST00000492539 Q6ZN92 141 aa12.41□□□□□ -0.42
NELFE-212ENST00000492539 TEX43Q6ZNM6 134 aa12.41□□□□□ -0.42
NELFE-212ENST00000492539 URB1-AS1Q96HZ7 61 aa12.41□□□□□ -0.42
NELFE-212ENST00000492539 A0A0J9YXV3 536 aa12.4□□□□□ -0.42
NELFE-212ENST00000492539 LINC00614P0C842 121 aa12.4□□□□□ -0.42
NELFE-212ENST00000492539 ODF1Q14990 250 aa12.4□□□□□ -0.42
NELFE-212ENST00000492539 AMELXQ99217 191 aa12.4□□□□□ -0.42
NELFE-212ENST00000492539 RAB5BP61020 215 aa12.39□□□□□ -0.43
NELFE-212ENST00000492539 PAPPA-AS1Q5QFB9 102 aa12.39□□□□□ -0.43
NELFE-212ENST00000492539 SPINK6Q6UWN8 80 aa12.39□□□□□ -0.43
NELFE-212ENST00000492539 ERASQ7Z444 233 aa12.39□□□□□ -0.43
NELFE-212ENST00000492539 LINC00474Q9P2X8 69 aa12.39□□□□□ -0.43
NELFE-212ENST00000492539 SCO1O75880 301 aa12.38□□□□□ -0.43
NELFE-212ENST00000492539 TRGC2P03986 189 aa12.38□□□□□ -0.43
NELFE-212ENST00000492539 KRTAP10-8P60410 259 aa12.38□□□□□ -0.43
NELFE-212ENST00000492539 LINC00173Q6ZV60 143 aa12.38□□□□□ -0.43
NELFE-212ENST00000492539 SCGB3A1Q96QR1 104 aa12.38□□□□□ -0.43
NELFE-212ENST00000492539 C2orf88Q9BSF0 95 aa12.38□□□□□ -0.43
NELFE-212ENST00000492539 VCX2Q9H322 139 aa12.38□□□□□ -0.43
NELFE-212ENST00000492539 PKIGQ9Y2B9 76 aa12.38□□□□□ -0.43
NELFE-212ENST00000492539 IGHV1-58A0A0C4DH39 117 aa12.37□□□□□ -0.43
NELFE-212ENST00000492539 COX7A2LO14548 114 aa12.37□□□□□ -0.43
NELFE-212ENST00000492539 CARD19Q96LW7 228 aa12.36□□□□□ -0.43
NELFE-212ENST00000492539 A0A096LNJ9 63 aa12.35□□□□□ -0.43
NELFE-212ENST00000492539 IGHV3OR16-9A0A0B4J2B5 98 aa12.35□□□□□ -0.43
NELFE-212ENST00000492539 MALP21145 153 aa12.35□□□□□ -0.43
NELFE-212ENST00000492539 UBE2D1P51668 147 aa12.35□□□□□ -0.43
NELFE-212ENST00000492539 SRSF9Q13242 221 aaKnown RBP eCLIP12.35□□□□□ -0.43
NELFE-212ENST00000492539 LINC00242Q5T6M2 205 aa12.35□□□□□ -0.43
NELFE-212ENST00000492539 ZC2HC1BQ5TFG8 222 aa12.35□□□□□ -0.43
NELFE-212ENST00000492539 REG3GQ6UW15 175 aa12.35□□□□□ -0.43
NELFE-212ENST00000492539 LINC00526Q96FQ7 95 aa12.35□□□□□ -0.43
NELFE-212ENST00000492539 HBDP02042 147 aa12.34□□□□□ -0.43
NELFE-212ENST00000492539 CHCHD1Q96BP2 118 aaKnown RBP12.34□□□□□ -0.43
NELFE-212ENST00000492539 Q6ZRP5 223 aa12.33□□□□□ -0.44
NELFE-212ENST00000492539 FAM19A3Q7Z5A8 133 aa12.33□□□□□ -0.44
NELFE-212ENST00000492539 C5orf38Q86SI9 138 aa12.33□□□□□ -0.44
NELFE-212ENST00000492539 APOMO95445 188 aa12.31□□□□□ -0.44
NELFE-212ENST00000492539 SYCNQ0VAF6 134 aa12.31□□□□□ -0.44
NELFE-212ENST00000492539 PMCHL1Q16048 86 aa12.31□□□□□ -0.44
NELFE-212ENST00000492539 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.3□□□□□ -0.44
NELFE-212ENST00000492539 S100A1P23297 94 aa12.3□□□□□ -0.44
NELFE-212ENST00000492539 PDZD11Q5EBL8 140 aa12.3□□□□□ -0.44
NELFE-212ENST00000492539 BAGE3Q86Y29 109 aa12.3□□□□□ -0.44
NELFE-212ENST00000492539 A0A087WZ39 114 aa12.29□□□□□ -0.44
NELFE-212ENST00000492539 ZNF561-AS1K7EIQ3 104 aa12.29□□□□□ -0.44
NELFE-212ENST00000492539 PTTG1IPP53801 180 aa12.29□□□□□ -0.44
NELFE-212ENST00000492539 SEC11AP67812 179 aa12.29□□□□□ -0.44
NELFE-212ENST00000492539 PMVKQ15126 192 aa12.28□□□□□ -0.44
NELFE-212ENST00000492539 OR10D4PQ8NGN7 298 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms