RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 TRAV26-1A0A087WT03 109 aa6.66□□□□□ -1.34
BRCA1-219ENST00000491747 SMIM9A6NGZ8 99 aa6.66□□□□□ -1.34
BRCA1-219ENST00000491747 I3L3M4 83 aa6.66□□□□□ -1.34
BRCA1-219ENST00000491747 INSP01308 110 aa6.66□□□□□ -1.34
BRCA1-219ENST00000491747 TMEM263Q8WUH6 116 aaKnown RBP6.66□□□□□ -1.34
BRCA1-219ENST00000491747 SACSQ9NZJ4 4579 aa6.65□□□□□ -1.34
BRCA1-219ENST00000491747 ZNF22P17026 224 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-219ENST00000491747 CEMP1Q6PRD7 247 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-219ENST00000491747 IGHV1OR15-1A0A075B7D0 117 aa6.65□□□□□ -1.35
BRCA1-219ENST00000491747 ATXN8Q156A1 80 aa6.65□□□□□ -1.35
BRCA1-219ENST00000491747 Q1RN00 199 aa6.65□□□□□ -1.35
BRCA1-219ENST00000491747 MUSTN1Q8IVN3 82 aa6.65□□□□□ -1.35
BRCA1-219ENST00000491747 OPRPNQ99935 248 aaPredicted RBP6.65□□□□□ -1.35
BRCA1-219ENST00000491747 Q6ZTC4 211 aa6.64□□□□□ -1.35
BRCA1-219ENST00000491747 IGLV4-3A0A075B6K6 122 aa6.64□□□□□ -1.35
BRCA1-219ENST00000491747 IGHV3-64A0A075B6Q5 118 aa6.64□□□□□ -1.35
BRCA1-219ENST00000491747 PLAC8L1A1L4L8 177 aa6.64□□□□□ -1.35
BRCA1-219ENST00000491747 NUPR2A6NF83 97 aa6.64□□□□□ -1.35
BRCA1-219ENST00000491747 H7C2G1 150 aa6.64□□□□□ -1.35
BRCA1-219ENST00000491747 M0R2P5 195 aa6.64□□□□□ -1.35
BRCA1-219ENST00000491747 LINC01587Q99440 93 aa6.64□□□□□ -1.35
BRCA1-219ENST00000491747 A0A0J9YXV3 536 aa6.63□□□□□ -1.35
BRCA1-219ENST00000491747 FAM222AQ5U5X8 452 aa6.63□□□□□ -1.35
BRCA1-219ENST00000491747 DNAH1Q9P2D7 4330 aa6.63□□□□□ -1.35
BRCA1-219ENST00000491747 ALMS1Q8TCU4 4167 aa6.63□□□□□ -1.35
BRCA1-219ENST00000491747 TRGV11A0A075B6L2 103 aa6.62□□□□□ -1.35
BRCA1-219ENST00000491747 A0A0J9YXY3 114 aa6.62□□□□□ -1.35
BRCA1-219ENST00000491747 TRBV30A0A0K0K1B3 111 aa6.62□□□□□ -1.35
BRCA1-219ENST00000491747 LCE6AA0A183 80 aa6.62□□□□□ -1.35
BRCA1-219ENST00000491747 HTN1P15515 57 aa6.62□□□□□ -1.35
BRCA1-219ENST00000491747 ANAPC13Q9BS18 74 aa6.62□□□□□ -1.35
BRCA1-219ENST00000491747 TIMM21Q9BVV7 248 aa6.62□□□□□ -1.35
BRCA1-219ENST00000491747 PYGO1Q9Y3Y4 419 aa6.62□□□□□ -1.35
BRCA1-219ENST00000491747 EIF4EBP3O60516 100 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-219ENST00000491747 IGHV3-30-3P0DP02 117 aa6.62□□□□□ -1.35
BRCA1-219ENST00000491747 LINC01620Q4KN68 170 aa6.62□□□□□ -1.35
BRCA1-219ENST00000491747 HYDINQ4G0P3 5121 aa6.62□□□□□ -1.35
BRCA1-219ENST00000491747 RYR2Q92736 4967 aa6.61□□□□□ -1.35
BRCA1-219ENST00000491747 SPART-AS1P0CW21 52 aa6.61□□□□□ -1.35
BRCA1-219ENST00000491747 MRPS36P82909 103 aaKnown RBP6.61□□□□□ -1.35
BRCA1-219ENST00000491747 LINC01600Q96MT4 127 aa6.61□□□□□ -1.35
BRCA1-219ENST00000491747 SPXQ9BT56 116 aa6.61□□□□□ -1.35
BRCA1-219ENST00000491747 SNCGO76070 127 aa6.61□□□□□ -1.35
BRCA1-219ENST00000491747 NTN5Q8WTR8 489 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-219ENST00000491747 TRBV10-2A0A0K0K1G8 114 aa6.6□□□□□ -1.35
BRCA1-219ENST00000491747 PRSS2P07478 247 aa6.6□□□□□ -1.35
BRCA1-219ENST00000491747 COX6CP09669 75 aa6.6□□□□□ -1.35
BRCA1-219ENST00000491747 RPL13AP40429 203 aaKnown RBP6.6□□□□□ -1.35
BRCA1-219ENST00000491747 KLK5Q9Y337 293 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-219ENST00000491747 TRAV10A0A0B4J240 114 aa6.6□□□□□ -1.35
BRCA1-219ENST00000491747 IGHV1-58A0A0C4DH39 117 aa6.6□□□□□ -1.35
BRCA1-219ENST00000491747 SPANXDQ9BXN6 97 aa6.6□□□□□ -1.35
BRCA1-219ENST00000491747 SPANXCQ9NY87 97 aa6.6□□□□□ -1.35
BRCA1-219ENST00000491747 DEFB131BA0A096LNP1 70 aa6.59□□□□□ -1.35
BRCA1-219ENST00000491747 TRIAP1O43715 76 aa6.59□□□□□ -1.35
BRCA1-219ENST00000491747 GAGE2BQ13066 116 aa6.59□□□□□ -1.35
BRCA1-219ENST00000491747 GAGE2EQ4V326 116 aa6.59□□□□□ -1.35
BRCA1-219ENST00000491747 LITAFQ99732 161 aa6.59□□□□□ -1.35
BRCA1-219ENST00000491747 GAGE2DQ9UEU5 116 aa6.59□□□□□ -1.35
BRCA1-219ENST00000491747 NDUFA12Q9UI09 145 aa6.59□□□□□ -1.35
BRCA1-219ENST00000491747 APLNQ9ULZ1 77 aa6.59□□□□□ -1.35
BRCA1-219ENST00000491747 C16orf74Q96GX8 76 aa6.59□□□□□ -1.35
BRCA1-219ENST00000491747 TNFRSF18Q9Y5U5 241 aa6.59□□□□□ -1.35
BRCA1-219ENST00000491747 TRAV8-4A0A0B4J246 113 aa6.58□□□□□ -1.36
BRCA1-219ENST00000491747 LINC00476Q8WZB0 136 aa6.58□□□□□ -1.36
BRCA1-219ENST00000491747 UBE2WQ96B02 151 aa6.58□□□□□ -1.36
BRCA1-219ENST00000491747 NOP10Q9NPE3 64 aaKnown RBP6.58□□□□□ -1.36
BRCA1-219ENST00000491747 SPANXA1Q9NS26 97 aa6.58□□□□□ -1.36
BRCA1-219ENST00000491747 ICOSQ9Y6W8 199 aa6.58□□□□□ -1.36
BRCA1-219ENST00000491747 TRAV8-3A0A0A6YYJ7 113 aa6.58□□□□□ -1.36
BRCA1-219ENST00000491747 TEX49A0A1B0GTD5 131 aa6.58□□□□□ -1.36
BRCA1-219ENST00000491747 TINCRA0A1B0GVN0 87 aa6.58□□□□□ -1.36
BRCA1-219ENST00000491747 LYRM9A8MSI8 78 aa6.58□□□□□ -1.36
BRCA1-219ENST00000491747 DAD1P61803 113 aa6.58□□□□□ -1.36
BRCA1-219ENST00000491747 MIAQ16674 131 aa6.58□□□□□ -1.36
BRCA1-219ENST00000491747 C2orf82Q6UX34 121 aa6.58□□□□□ -1.36
BRCA1-219ENST00000491747 C11orf72Q8NBR9 251 aa6.58□□□□□ -1.36
BRCA1-219ENST00000491747 VSIG2Q96IQ7 327 aa6.58□□□□□ -1.36
BRCA1-219ENST00000491747 H3BT86 120 aa6.57□□□□□ -1.36
BRCA1-219ENST00000491747 DEFB130BP0DP73 79 aa6.57□□□□□ -1.36
BRCA1-219ENST00000491747 DEFB130AP0DP74 79 aa6.57□□□□□ -1.36
BRCA1-219ENST00000491747 GAGE5Q13069 117 aa6.57□□□□□ -1.36
BRCA1-219ENST00000491747 GAGE6Q13070 117 aa6.57□□□□□ -1.36
BRCA1-219ENST00000491747 Q6Q795 121 aa6.57□□□□□ -1.36
BRCA1-219ENST00000491747 LINC00467Q9BRT7 94 aa6.57□□□□□ -1.36
BRCA1-219ENST00000491747 VPS13DQ5THJ4 4388 aa6.57□□□□□ -1.36
BRCA1-219ENST00000491747 LY6G6CO95867 125 aa6.57□□□□□ -1.36
BRCA1-219ENST00000491747 HTN3P15516 51 aa6.57□□□□□ -1.36
BRCA1-219ENST00000491747 TTC32Q5I0X7 151 aa6.57□□□□□ -1.36
BRCA1-219ENST00000491747 IGHV3-73A0A0B4J1V6 119 aa6.56□□□□□ -1.36
BRCA1-219ENST00000491747 TRAV4A0A0B4J268 109 aa6.56□□□□□ -1.36
BRCA1-219ENST00000491747 PIK3CD-AS1Q5SR53 167 aa6.56□□□□□ -1.36
BRCA1-219ENST00000491747 FAM104AQ969W3 186 aa6.56□□□□□ -1.36
BRCA1-219ENST00000491747 TIMM17BO60830 172 aa6.55□□□□□ -1.36
BRCA1-219ENST00000491747 IFITM1P13164 125 aa6.55□□□□□ -1.36
BRCA1-219ENST00000491747 NDUFV3P56181 108 aaKnown RBP6.55□□□□□ -1.36
BRCA1-219ENST00000491747 ADAMTSL4-AS1Q5T5F5 129 aa6.55□□□□□ -1.36
BRCA1-219ENST00000491747 LINC00612Q8N6U2 182 aa6.55□□□□□ -1.36
BRCA1-219ENST00000491747 UBE2D4Q9Y2X8 147 aa6.55□□□□□ -1.36
BRCA1-219ENST00000491747 H7C423 109 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms