RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 NDUFA1O15239 70 aa12.95□□□□□ -0.34
EXD3-212ENST00000491734 CEMP1Q6PRD7 247 aaPredicted RBP12.95□□□□□ -0.34
EXD3-212ENST00000491734 C2CD3Q4AC94 2353 aa12.94□□□□□ -0.34
EXD3-212ENST00000491734 TIRAPP58753 221 aa12.94□□□□□ -0.34
EXD3-212ENST00000491734 Q6ZSN1 163 aa12.94□□□□□ -0.34
EXD3-212ENST00000491734 ACYP1P07311 99 aa12.94□□□□□ -0.34
EXD3-212ENST00000491734 Q9UF83 564 aa12.94□□□□□ -0.34
EXD3-212ENST00000491734 DNAJC30Q96LL9 226 aa12.93□□□□□ -0.34
EXD3-212ENST00000491734 C19orf73Q9NVV2 129 aa12.93□□□□□ -0.34
EXD3-212ENST00000491734 IMUPQ9GZP8 106 aa12.92□□□□□ -0.34
EXD3-212ENST00000491734 A8MZ25 164 aa12.91□□□□□ -0.34
EXD3-212ENST00000491734 GIG44P09565 113 aaPredicted RBP12.91□□□□□ -0.34
EXD3-212ENST00000491734 BEAN1Q3B7T3 259 aa12.91□□□□□ -0.34
EXD3-212ENST00000491734 RNASE13Q5GAN3 156 aaKnown RBP12.91□□□□□ -0.34
EXD3-212ENST00000491734 RPL35AP18077 110 aaKnown RBP12.9□□□□□ -0.34
EXD3-212ENST00000491734 CIRBPQ14011 172 aaKnown RBP12.9□□□□□ -0.34
EXD3-212ENST00000491734 FAM110AQ9BQ89 295 aa12.9□□□□□ -0.34
EXD3-212ENST00000491734 COPS9Q8WXC6 57 aa12.89□□□□□ -0.35
EXD3-212ENST00000491734 IGLV5-39A0A0G2JS06 123 aa12.88□□□□□ -0.35
EXD3-212ENST00000491734 NPC2P61916 151 aa12.88□□□□□ -0.35
EXD3-212ENST00000491734 TMEM101Q96IK0 257 aa12.88□□□□□ -0.35
EXD3-212ENST00000491734 CDKN2A-AS1Q9UH64 79 aa12.88□□□□□ -0.35
EXD3-212ENST00000491734 COX7A2LO14548 114 aa12.88□□□□□ -0.35
EXD3-212ENST00000491734 PF4P02776 101 aa12.88□□□□□ -0.35
EXD3-212ENST00000491734 CMC4P56277 68 aaPredicted RBP12.88□□□□□ -0.35
EXD3-212ENST00000491734 FAM19A3Q7Z5A8 133 aa12.88□□□□□ -0.35
EXD3-212ENST00000491734 PPDPFQ9H3Y8 114 aa12.88□□□□□ -0.35
EXD3-212ENST00000491734 F8P00451 2351 aa12.88□□□□□ -0.35
EXD3-212ENST00000491734 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.87□□□□□ -0.35
EXD3-212ENST00000491734 IGKV2-29A2NJV5 120 aaPredicted RBP12.87□□□□□ -0.35
EXD3-212ENST00000491734 RS1O15537 224 aa12.87□□□□□ -0.35
EXD3-212ENST00000491734 IGHV3-53P01767 116 aa12.87□□□□□ -0.35
EXD3-212ENST00000491734 LINC00482Q8N8I6 264 aa12.87□□□□□ -0.35
EXD3-212ENST00000491734 LINC00308Q8TCZ7 52 aa12.87□□□□□ -0.35
EXD3-212ENST00000491734 SHISA2Q6UWI4 295 aa12.87□□□□□ -0.35
EXD3-212ENST00000491734 SPATA3Q8NHX4 192 aa12.87□□□□□ -0.35
EXD3-212ENST00000491734 IL17DQ8TAD2 202 aa12.87□□□□□ -0.35
EXD3-212ENST00000491734 TRGV1A0A0A0MS02 117 aa12.86□□□□□ -0.35
EXD3-212ENST00000491734 MEIG1Q5JSS6 88 aa12.85□□□□□ -0.35
EXD3-212ENST00000491734 SDIM1Q6ZPB5 146 aa12.85□□□□□ -0.35
EXD3-212ENST00000491734 HERVK_113P63121 156 aa12.84□□□□□ -0.35
EXD3-212ENST00000491734 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.84□□□□□ -0.35
EXD3-212ENST00000491734 NACAE9PAV3 2078 aa12.83□□□□□ -0.35
EXD3-212ENST00000491734 TRACP01848 142 aa12.83□□□□□ -0.36
EXD3-212ENST00000491734 Q6ZTI0 123 aa12.83□□□□□ -0.36
EXD3-212ENST00000491734 DAND5Q8N907 189 aa12.83□□□□□ -0.36
EXD3-212ENST00000491734 TMEM126AQ9H061 195 aa12.83□□□□□ -0.36
EXD3-212ENST00000491734 IGHV3-38A0A0C4DH36 116 aa12.82□□□□□ -0.36
EXD3-212ENST00000491734 LINC00643Q86TS7 51 aa12.81□□□□□ -0.36
EXD3-212ENST00000491734 CHCHD5Q9BSY4 110 aa12.81□□□□□ -0.36
EXD3-212ENST00000491734 Q9H8V8 135 aa12.81□□□□□ -0.36
EXD3-212ENST00000491734 NOP10Q9NPE3 64 aaKnown RBP12.81□□□□□ -0.36
EXD3-212ENST00000491734 CSNK1G2-AS1Q8NCQ2 148 aa12.81□□□□□ -0.36
EXD3-212ENST00000491734 COX6A2Q02221 97 aa12.8□□□□□ -0.36
EXD3-212ENST00000491734 LINC00242Q5T6M2 205 aa12.8□□□□□ -0.36
EXD3-212ENST00000491734 FAM222AQ5U5X8 452 aa12.8□□□□□ -0.36
EXD3-212ENST00000491734 PLAC8L1A1L4L8 177 aa12.8□□□□□ -0.36
EXD3-212ENST00000491734 CSDC2Q9Y534 153 aaKnown RBP12.8□□□□□ -0.36
EXD3-212ENST00000491734 ATP5G1P05496 136 aa12.79□□□□□ -0.36
EXD3-212ENST00000491734 DGAT2L7PQ6IED9 249 aa12.79□□□□□ -0.36
EXD3-212ENST00000491734 SOSTDC1Q6X4U4 206 aa12.79□□□□□ -0.36
EXD3-212ENST00000491734 SMIM20Q8N5G0 67 aa12.79□□□□□ -0.36
EXD3-212ENST00000491734 ZNF625Q96I27 306 aaPredicted RBP12.79□□□□□ -0.36
EXD3-212ENST00000491734 SMIM1B2RUZ4 78 aa12.78□□□□□ -0.36
EXD3-212ENST00000491734 TENM1Q9UKZ4 2725 aa12.78□□□□□ -0.36
EXD3-212ENST00000491734 HERV-K104P63124 156 aa12.77□□□□□ -0.36
EXD3-212ENST00000491734 JMJD1CQ15652 2540 aa12.77□□□□□ -0.36
EXD3-212ENST00000491734 SMCR5Q8TEV8 140 aa12.77□□□□□ -0.37
EXD3-212ENST00000491734 CXCL5P42830 114 aa12.76□□□□□ -0.37
EXD3-212ENST00000491734 FAM236AA0A1B0GUQ0 79 aa12.76□□□□□ -0.37
EXD3-212ENST00000491734 FAM236BA0A1B0GV22 79 aa12.76□□□□□ -0.37
EXD3-212ENST00000491734 DAZ2Q13117 558 aaKnown RBP12.76□□□□□ -0.37
EXD3-212ENST00000491734 DAZ4Q86SG3 579 aaKnown RBP12.76□□□□□ -0.37
EXD3-212ENST00000491734 C16orf74Q96GX8 76 aa12.76□□□□□ -0.37
EXD3-212ENST00000491734 DAZ3Q9NR90 486 aaKnown RBP12.76□□□□□ -0.37
EXD3-212ENST00000491734 C22orf24Q9Y442 160 aa12.75□□□□□ -0.37
EXD3-212ENST00000491734 TEP1Q99973 2627 aaKnown RBP12.74□□□□□ -0.37
EXD3-212ENST00000491734 BAALC-AS2P0C853 105 aa12.74□□□□□ -0.37
EXD3-212ENST00000491734 INAFM2P0DMQ5 153 aa12.74□□□□□ -0.37
EXD3-212ENST00000491734 F5H768 121 aa12.73□□□□□ -0.37
EXD3-212ENST00000491734 C5orf38Q86SI9 138 aa12.73□□□□□ -0.37
EXD3-212ENST00000491734 VWFP04275 2813 aa12.73□□□□□ -0.37
EXD3-212ENST00000491734 MAST4O15021 2626 aa12.73□□□□□ -0.37
EXD3-212ENST00000491734 ATRQ13535 2644 aa12.73□□□□□ -0.37
EXD3-212ENST00000491734 PRIMA1Q86XR5 153 aa12.73□□□□□ -0.37
EXD3-212ENST00000491734 K7EQD1 137 aa12.72□□□□□ -0.37
EXD3-212ENST00000491734 C9orf66Q5T8R8 295 aa12.72□□□□□ -0.37
EXD3-212ENST00000491734 TRGV2A0A075B6R0 118 aa12.71□□□□□ -0.37
EXD3-212ENST00000491734 TRBV10-1A0A0K0K1A3 114 aa12.71□□□□□ -0.37
EXD3-212ENST00000491734 RPL28P46779 137 aaKnown RBP12.71□□□□□ -0.37
EXD3-212ENST00000491734 C3orf22Q8N5N4 141 aa12.71□□□□□ -0.37
EXD3-212ENST00000491734 OVOL2Q9BRP0 275 aa12.7□□□□□ -0.38
EXD3-212ENST00000491734 TRAV13-2A0A0B4J235 113 aa12.7□□□□□ -0.38
EXD3-212ENST00000491734 UQCRQO14949 82 aa12.7□□□□□ -0.38
EXD3-212ENST00000491734 LINC00694P0DN24 101 aa12.7□□□□□ -0.38
EXD3-212ENST00000491734 FAM218AQ96MZ4 157 aa12.69□□□□□ -0.38
EXD3-212ENST00000491734 CDC42SE2Q9NRR3 84 aa12.69□□□□□ -0.38
EXD3-212ENST00000491734 RPL36AP83881 106 aaKnown RBP12.69□□□□□ -0.38
EXD3-212ENST00000491734 RPL36ALQ969Q0 106 aaKnown RBP12.69□□□□□ -0.38
EXD3-212ENST00000491734 LOC100131303A0A0U1RQF7 123 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms