RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 PKIGQ9Y2B9 76 aa7.19□□□□□ -1.26
CPSF7-212ENST00000489728 RYR1P21817 5038 aa7.19□□□□□ -1.26
CPSF7-212ENST00000489728 F8WDY8 70 aa7.18□□□□□ -1.26
CPSF7-212ENST00000489728 LINC00242Q5T6M2 205 aa7.18□□□□□ -1.26
CPSF7-212ENST00000489728 LINC01561Q8N1V8 128 aa7.18□□□□□ -1.26
CPSF7-212ENST00000489728 OR10D4PQ8NGN7 298 aa7.18□□□□□ -1.26
CPSF7-212ENST00000489728 CHCHD1Q96BP2 118 aaKnown RBP7.18□□□□□ -1.26
CPSF7-212ENST00000489728 APOBP04114 4563 aaKnown RBP7.17□□□□□ -1.26
CPSF7-212ENST00000489728 IGHV3-64A0A075B6Q5 118 aa7.17□□□□□ -1.26
CPSF7-212ENST00000489728 A0A087WZ39 114 aa7.17□□□□□ -1.26
CPSF7-212ENST00000489728 COLCA2A8K830 154 aa7.17□□□□□ -1.26
CPSF7-212ENST00000489728 HBDP02042 147 aa7.17□□□□□ -1.26
CPSF7-212ENST00000489728 URB1-AS1Q96HZ7 61 aa7.17□□□□□ -1.26
CPSF7-212ENST00000489728 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-212ENST00000489728 ZNF561-AS1K7EIQ3 104 aa7.16□□□□□ -1.26
CPSF7-212ENST00000489728 TRGC2P03986 189 aa7.16□□□□□ -1.26
CPSF7-212ENST00000489728 XGP55808 180 aa7.16□□□□□ -1.26
CPSF7-212ENST00000489728 HERVK_113P63121 156 aa7.16□□□□□ -1.26
CPSF7-212ENST00000489728 HIGD2BQ4VC39 106 aa7.16□□□□□ -1.26
CPSF7-212ENST00000489728 C2orf48Q96LS8 159 aa7.16□□□□□ -1.26
CPSF7-212ENST00000489728 A0A096LNJ9 63 aa7.15□□□□□ -1.26
CPSF7-212ENST00000489728 ATP5LO75964 103 aa7.15□□□□□ -1.26
CPSF7-212ENST00000489728 SLPIP03973 132 aa7.15□□□□□ -1.26
CPSF7-212ENST00000489728 SDIM1Q6ZPB5 146 aa7.15□□□□□ -1.26
CPSF7-212ENST00000489728 C5orf38Q86SI9 138 aa7.15□□□□□ -1.26
CPSF7-212ENST00000489728 HSPG2P98160 4391 aa7.14□□□□□ -1.27
CPSF7-212ENST00000489728 PMVKQ15126 192 aa7.14□□□□□ -1.27
CPSF7-212ENST00000489728 LINC01620Q4KN68 170 aa7.14□□□□□ -1.27
CPSF7-212ENST00000489728 PDZD11Q5EBL8 140 aa7.14□□□□□ -1.27
CPSF7-212ENST00000489728 CARD19Q96LW7 228 aa7.14□□□□□ -1.27
CPSF7-212ENST00000489728 CHAC1Q9BUX1 264 aa7.14□□□□□ -1.27
CPSF7-212ENST00000489728 IGLV4-69A0A075B6H9 119 aa7.13□□□□□ -1.27
CPSF7-212ENST00000489728 TINCRA0A1B0GVN0 87 aa7.13□□□□□ -1.27
CPSF7-212ENST00000489728 SPAG11BQ08648 103 aa7.13□□□□□ -1.27
CPSF7-212ENST00000489728 SYCNQ0VAF6 134 aa7.13□□□□□ -1.27
CPSF7-212ENST00000489728 CIRBPQ14011 172 aaKnown RBP7.13□□□□□ -1.27
CPSF7-212ENST00000489728 Q8N1X5 172 aa7.13□□□□□ -1.27
CPSF7-212ENST00000489728 CST9LQ9H4G1 147 aa7.13□□□□□ -1.27
CPSF7-212ENST00000489728 GEMIN7Q9H840 131 aaKnown RBP7.13□□□□□ -1.27
CPSF7-212ENST00000489728 FAM30AQ9NZY2 134 aa7.13□□□□□ -1.27
CPSF7-212ENST00000489728 IGLV5-45A0A087WSX0 123 aa7.12□□□□□ -1.27
CPSF7-212ENST00000489728 S100A1P23297 94 aa7.12□□□□□ -1.27
CPSF7-212ENST00000489728 COX6A2Q02221 97 aa7.12□□□□□ -1.27
CPSF7-212ENST00000489728 RNF151Q2KHN1 245 aa7.12□□□□□ -1.27
CPSF7-212ENST00000489728 BAGE3Q86Y29 109 aa7.12□□□□□ -1.27
CPSF7-212ENST00000489728 ORAOV1Q8WV07 137 aa7.12□□□□□ -1.27
CPSF7-212ENST00000489728 LINC00474Q9P2X8 69 aa7.12□□□□□ -1.27
CPSF7-212ENST00000489728 HSBP1O75506 76 aa7.11□□□□□ -1.27
CPSF7-212ENST00000489728 ZC2HC1BQ5TFG8 222 aa7.11□□□□□ -1.27
CPSF7-212ENST00000489728 CAMK2N2Q96S95 79 aa7.11□□□□□ -1.27
CPSF7-212ENST00000489728 A0A0J9YXV3 536 aa7.1□□□□□ -1.27
CPSF7-212ENST00000489728 NDUFA1O15239 70 aa7.1□□□□□ -1.27
CPSF7-212ENST00000489728 SCO1O75880 301 aa7.1□□□□□ -1.27
CPSF7-212ENST00000489728 PMCHL1Q16048 86 aa7.1□□□□□ -1.27
CPSF7-212ENST00000489728 SCXQ7RTU7 201 aa7.1□□□□□ -1.27
CPSF7-212ENST00000489728 PACRGQ96M98 296 aaPredicted RBP7.1□□□□□ -1.27
CPSF7-212ENST00000489728 MRPL35Q9NZE8 188 aaKnown RBP7.1□□□□□ -1.27
CPSF7-212ENST00000489728 IGLC3P0DOY3 106 aa7.09□□□□□ -1.27
CPSF7-212ENST00000489728 KIAA0087Q14695 138 aa7.09□□□□□ -1.27
CPSF7-212ENST00000489728 Q6ZRU5 148 aa7.09□□□□□ -1.27
CPSF7-212ENST00000489728 Q8IZM0 81 aa7.09□□□□□ -1.27
CPSF7-212ENST00000489728 LINC00469Q8N7U9 141 aa7.09□□□□□ -1.27
CPSF7-212ENST00000489728 CIRBP-AS1Q8TBR5 109 aa7.09□□□□□ -1.27
CPSF7-212ENST00000489728 SPACA4Q8TDM5 124 aa7.09□□□□□ -1.27
CPSF7-212ENST00000489728 CDKN2A-AS1Q9UH64 79 aa7.09□□□□□ -1.27
CPSF7-212ENST00000489728 DNAH8Q96JB1 4490 aa7.08□□□□□ -1.28
CPSF7-212ENST00000489728 TRAV12-1A0A0B4J245 112 aa7.08□□□□□ -1.28
CPSF7-212ENST00000489728 LOC107984640A0A0U1RRK4 108 aa7.08□□□□□ -1.28
CPSF7-212ENST00000489728 H3BRM9 83 aa7.08□□□□□ -1.28
CPSF7-212ENST00000489728 SERF1AO75920 110 aa7.08□□□□□ -1.28
CPSF7-212ENST00000489728 PRSS2P07478 247 aa7.08□□□□□ -1.28
CPSF7-212ENST00000489728 CXCL5P42830 114 aa7.08□□□□□ -1.28
CPSF7-212ENST00000489728 LINC00526Q96FQ7 95 aa7.08□□□□□ -1.28
CPSF7-212ENST00000489728 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-212ENST00000489728 TRBV30A0A0K0K1B3 111 aa7.07□□□□□ -1.28
CPSF7-212ENST00000489728 SMIM1B2RUZ4 78 aa7.07□□□□□ -1.28
CPSF7-212ENST00000489728 FAM229AH3BQW9 127 aa7.07□□□□□ -1.28
CPSF7-212ENST00000489728 IFI27L1Q96BM0 104 aa7.07□□□□□ -1.28
CPSF7-212ENST00000489728 EPM2AB3EWF7 344 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 HIST1H2BKO60814 126 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 HIST1H2BJP06899 126 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 TLX1NBP0CAT3 122 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 HIST1H2BOP23527 126 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 HIST1H2BBP33778 126 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 NDUFA6P56556 154 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 HIST1H2BDP58876 126 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 LINC00310P59036 64 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 HIST1H2BCP62807 126 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 HIST2H2BEQ16778 126 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-212ENST00000489728 HIST1H2BHQ93079 126 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 HIST1H2BNQ99877 126 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 HIST1H2BMQ99879 126 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 PLAC8Q9NZF1 115 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 HSPB8Q9UJY1 196 aa7.06□□□□□ -1.28
CPSF7-212ENST00000489728 A0A096LNI7 61 aa7.05□□□□□ -1.28
CPSF7-212ENST00000489728 PANO1I0J062 215 aa7.05□□□□□ -1.28
CPSF7-212ENST00000489728 ATP6V1G1O75348 118 aa7.05□□□□□ -1.28
CPSF7-212ENST00000489728 LEPROTL1O95214 131 aa7.05□□□□□ -1.28
CPSF7-212ENST00000489728 PTTG1IPP53801 180 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms