RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 ERASQ7Z444 233 aa5.43□□□□□ -1.54
SF1-218ENST00000489544 C5orf38Q86SI9 138 aa5.43□□□□□ -1.54
SF1-218ENST00000489544 LINC00528Q8N1L1 170 aa5.43□□□□□ -1.54
SF1-218ENST00000489544 HIST1H2BHQ93079 126 aa5.43□□□□□ -1.54
SF1-218ENST00000489544 AMELXQ99217 191 aa5.43□□□□□ -1.54
SF1-218ENST00000489544 TIMM17AQ99595 171 aa5.43□□□□□ -1.54
SF1-218ENST00000489544 HIST1H2BNQ99877 126 aa5.43□□□□□ -1.54
SF1-218ENST00000489544 HIST1H2BMQ99879 126 aa5.43□□□□□ -1.54
SF1-218ENST00000489544 VCX2Q9H322 139 aa5.43□□□□□ -1.54
SF1-218ENST00000489544 PCLOQ9Y6V0 5065 aa5.43□□□□□ -1.54
SF1-218ENST00000489544 G0S2P27469 103 aa5.42□□□□□ -1.54
SF1-218ENST00000489544 UBE2D1P51668 147 aa5.42□□□□□ -1.54
SF1-218ENST00000489544 LINC01620Q4KN68 170 aa5.42□□□□□ -1.54
SF1-218ENST00000489544 PDZD11Q5EBL8 140 aa5.42□□□□□ -1.54
SF1-218ENST00000489544 LINC00242Q5T6M2 205 aa5.42□□□□□ -1.54
SF1-218ENST00000489544 CD164L2Q6UWJ8 174 aa5.42□□□□□ -1.54
SF1-218ENST00000489544 Q6ZN92 141 aa5.42□□□□□ -1.54
SF1-218ENST00000489544 C15orf56Q8N910 161 aa5.42□□□□□ -1.54
SF1-218ENST00000489544 NTN5Q8WTR8 489 aaPredicted RBP5.42□□□□□ -1.54
SF1-218ENST00000489544 CHCHD1Q96BP2 118 aaKnown RBP5.42□□□□□ -1.54
SF1-218ENST00000489544 LINC00526Q96FQ7 95 aa5.42□□□□□ -1.54
SF1-218ENST00000489544 hDV102S1A0JD36 115 aa5.41□□□□□ -1.54
SF1-218ENST00000489544 C16orf90A8MZG2 172 aa5.41□□□□□ -1.54
SF1-218ENST00000489544 HSBP1O75506 76 aa5.41□□□□□ -1.54
SF1-218ENST00000489544 SLPIP03973 132 aa5.41□□□□□ -1.54
SF1-218ENST00000489544 C2orf88Q9BSF0 95 aa5.41□□□□□ -1.54
SF1-218ENST00000489544 KIAA1109Q2LD37 5005 aa5.41□□□□□ -1.54
SF1-218ENST00000489544 DNAH8Q96JB1 4490 aa5.41□□□□□ -1.54
SF1-218ENST00000489544 IGLV5-52A0A0A0MRZ9 124 aa5.4□□□□□ -1.54
SF1-218ENST00000489544 IGHV3OR16-9A0A0B4J2B5 98 aa5.4□□□□□ -1.54
SF1-218ENST00000489544 A0A0J9YXV3 536 aa5.4□□□□□ -1.54
SF1-218ENST00000489544 COX7A2LO14548 114 aa5.4□□□□□ -1.54
SF1-218ENST00000489544 NDUFA6P56556 154 aa5.4□□□□□ -1.54
SF1-218ENST00000489544 CST9LQ9H4G1 147 aa5.4□□□□□ -1.54
SF1-218ENST00000489544 APOBP04114 4563 aaKnown RBP5.39□□□□□ -1.55
SF1-218ENST00000489544 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.39□□□□□ -1.55
SF1-218ENST00000489544 NPSP0C0P6 89 aa5.39□□□□□ -1.55
SF1-218ENST00000489544 KRTAP10-1P60331 282 aa5.39□□□□□ -1.55
SF1-218ENST00000489544 PMVKQ15126 192 aa5.39□□□□□ -1.55
SF1-218ENST00000489544 PAPPA-AS1Q5QFB9 102 aa5.39□□□□□ -1.55
SF1-218ENST00000489544 PGPEP1Q9NXJ5 209 aa5.39□□□□□ -1.55
SF1-218ENST00000489544 GVQW2A0A096LPI5 108 aaPredicted RBP5.38□□□□□ -1.55
SF1-218ENST00000489544 IGHV1-58A0A0C4DH39 117 aa5.38□□□□□ -1.55
SF1-218ENST00000489544 LINC01549A6NIU2 74 aa5.38□□□□□ -1.55
SF1-218ENST00000489544 ATP5LO75964 103 aa5.38□□□□□ -1.55
SF1-218ENST00000489544 FABP4P15090 132 aa5.38□□□□□ -1.55
SF1-218ENST00000489544 MALP21145 153 aa5.38□□□□□ -1.55
SF1-218ENST00000489544 C14orf177Q52M58 125 aa5.38□□□□□ -1.55
SF1-218ENST00000489544 IFI27L1Q96BM0 104 aa5.38□□□□□ -1.55
SF1-218ENST00000489544 CDKN2A-AS1Q9UH64 79 aa5.38□□□□□ -1.55
SF1-218ENST00000489544 H0Y8G0 127 aa5.37□□□□□ -1.55
SF1-218ENST00000489544 LEPROTL1O95214 131 aa5.37□□□□□ -1.55
SF1-218ENST00000489544 GCSHP23434 173 aa5.37□□□□□ -1.55
SF1-218ENST00000489544 HAMPP81172 84 aa5.37□□□□□ -1.55
SF1-218ENST00000489544 CDPF1Q6NVV7 123 aa5.37□□□□□ -1.55
SF1-218ENST00000489544 CFAP161Q6P656 301 aa5.37□□□□□ -1.55
SF1-218ENST00000489544 FAM19A3Q7Z5A8 133 aa5.37□□□□□ -1.55
SF1-218ENST00000489544 GEMIN7Q9H840 131 aaKnown RBP5.37□□□□□ -1.55
SF1-218ENST00000489544 IGLV4-69A0A075B6H9 119 aa5.36□□□□□ -1.55
SF1-218ENST00000489544 IGHV3-64A0A075B6Q5 118 aa5.36□□□□□ -1.55
SF1-218ENST00000489544 A0A087WZ39 114 aa5.36□□□□□ -1.55
SF1-218ENST00000489544 TINCRA0A1B0GVN0 87 aa5.36□□□□□ -1.55
SF1-218ENST00000489544 HERVK_113P63121 156 aa5.36□□□□□ -1.55
SF1-218ENST00000489544 SPAG11BQ08648 103 aa5.36□□□□□ -1.55
SF1-218ENST00000489544 LINC00469Q8N7U9 141 aa5.36□□□□□ -1.55
SF1-218ENST00000489544 ORAOV1Q8WV07 137 aa5.36□□□□□ -1.55
SF1-218ENST00000489544 FAM30AQ9NZY2 134 aa5.36□□□□□ -1.55
SF1-218ENST00000489544 RYR1P21817 5038 aa5.36□□□□□ -1.55
SF1-218ENST00000489544 C11orf86A6NJI1 115 aa5.35□□□□□ -1.55
SF1-218ENST00000489544 ZNF561-AS1K7EIQ3 104 aa5.35□□□□□ -1.55
SF1-218ENST00000489544 SPINK8P0C7L1 97 aa5.35□□□□□ -1.55
SF1-218ENST00000489544 IGLC3P0DOY3 106 aa5.35□□□□□ -1.55
SF1-218ENST00000489544 COA6Q5JTJ3 125 aaKnown RBP5.35□□□□□ -1.55
SF1-218ENST00000489544 CHAC1Q9BUX1 264 aa5.35□□□□□ -1.55
SF1-218ENST00000489544 CHTOPQ9Y3Y2 248 aaKnown RBP5.35□□□□□ -1.55
SF1-218ENST00000489544 APOMO95445 188 aa5.34□□□□□ -1.55
SF1-218ENST00000489544 ZNF22P17026 224 aaPredicted RBP5.34□□□□□ -1.55
SF1-218ENST00000489544 CNBPP62633 177 aaKnown RBP5.34□□□□□ -1.55
SF1-218ENST00000489544 SEC11AP67812 179 aa5.34□□□□□ -1.55
SF1-218ENST00000489544 KIAA0087Q14695 138 aa5.34□□□□□ -1.55
SF1-218ENST00000489544 C10orf25Q5T742 122 aa5.34□□□□□ -1.55
SF1-218ENST00000489544 C2orf82Q6UX34 121 aa5.34□□□□□ -1.55
SF1-218ENST00000489544 Q6ZRU5 148 aa5.34□□□□□ -1.55
SF1-218ENST00000489544 C9orf163Q8N9P6 203 aa5.34□□□□□ -1.55
SF1-218ENST00000489544 PMCHL2Q9BQD1 86 aa5.34□□□□□ -1.55
SF1-218ENST00000489544 MRPL35Q9NZE8 188 aaKnown RBP5.34□□□□□ -1.55
SF1-218ENST00000489544 TOMM7Q9P0U1 55 aa5.34□□□□□ -1.55
SF1-218ENST00000489544 HSPG2P98160 4391 aa5.34□□□□□ -1.56
SF1-218ENST00000489544 IGLV5-45A0A087WSX0 123 aa5.33□□□□□ -1.56
SF1-218ENST00000489544 TRAV12-1A0A0B4J245 112 aa5.33□□□□□ -1.56
SF1-218ENST00000489544 SMIM1B2RUZ4 78 aa5.33□□□□□ -1.56
SF1-218ENST00000489544 PANO1I0J062 215 aa5.33□□□□□ -1.56
SF1-218ENST00000489544 SYCNQ0VAF6 134 aa5.33□□□□□ -1.56
SF1-218ENST00000489544 ODF1Q14990 250 aa5.33□□□□□ -1.56
SF1-218ENST00000489544 UNQ6190/PRO20217Q6UXQ8 127 aa5.33□□□□□ -1.56
SF1-218ENST00000489544 OR10D4PQ8NGN7 298 aa5.33□□□□□ -1.56
SF1-218ENST00000489544 CARD19Q96LW7 228 aa5.33□□□□□ -1.56
SF1-218ENST00000489544 PACRGQ96M98 296 aaPredicted RBP5.33□□□□□ -1.56
SF1-218ENST00000489544 CAMK2N2Q96S95 79 aa5.33□□□□□ -1.56
SF1-218ENST00000489544 HSPB8Q9UJY1 196 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms