RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 MED13LQ71F56 2210 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 MUC4Q99102 2169 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 SPTBN1Q01082 2364 aaKnown RBP1.98□□□□□ -2.09
CALD1-221ENST00000489019 IGHV1-58A0A0C4DH39 117 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 IGKV3OR2-268A0A0C4DH90 116 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 LOC107984156A0A0G2JMH3 177 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 TINCRA0A1B0GVN0 87 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 TMEM238C9JI98 176 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 K7EP13 123 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 SPINK8P0C7L1 97 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 SCGB1C2P0DMR2 95 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 IGHV3-30-3P0DP02 117 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 DEFB130BP0DP73 79 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 DEFB130AP0DP74 79 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 PSMB2P49721 201 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 INSL3P51460 131 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 TSPEAR-AS2P59090 65 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 HERVK_113P63121 156 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 CIRBPQ14011 172 aaKnown RBP1.98□□□□□ -2.09
CALD1-221ENST00000489019 Q1RN00 199 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 LYRM7Q5U5X0 104 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 Q6ZR54 194 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 Q6ZUT4 128 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 ARL17AQ8IVW1 177 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 SLC25A29Q8N8R3 303 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 AMELXQ99217 191 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 TMEM243Q9BU79 118 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 SPANXB1Q9NS25 103 aaPredicted RBP1.98□□□□□ -2.09
CALD1-221ENST00000489019 DHRS4-AS1Q9P1J3 65 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 CBY1Q9Y3M2 126 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 RELNP78509 3460 aa1.98□□□□□ -2.09
CALD1-221ENST00000489019 DCHS2Q6V1P9 2916 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 NBASA2RRP1 2371 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 TRAV8-3A0A0A6YYJ7 113 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.97□□□□□ -2.09
CALD1-221ENST00000489019 TRAV13-1A0A0B4J241 112 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 A0A0J9YY99 117 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 TRBV6-4A0A1B0GX49 114 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 SMIM9A6NGZ8 99 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 TMEM262E9PQX1 116 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 K7ERU9 68 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 KRTAP1-4P0C5Y4 121 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 UBE2D1P51668 147 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 APOC4P55056 127 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 UBE2D3P61077 147 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 NPC2P61916 151 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 UBE2D2P62837 147 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 MRPS36P82909 103 aaKnown RBP1.97□□□□□ -2.09
CALD1-221ENST00000489019 MEIG1Q5JSS6 88 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 MUSTN1Q8IVN3 82 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.97□□□□□ -2.09
CALD1-221ENST00000489019 KIR2DL5BQ8NHK3 375 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 VSIG2Q96IQ7 327 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 VPS25Q9BRG1 176 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 GTSF1LQ9H1H1 148 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 Q9UF83 564 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 NDUFA12Q9UI09 145 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 NCOR2Q9Y618 2525 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.97□□□□□ -2.09
CALD1-221ENST00000489019 CEP295Q9C0D2 2601 aa1.97□□□□□ -2.09
CALD1-221ENST00000489019 AKAP6Q13023 2319 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 AGRNO00468 2067 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 A0A096LPF7 62 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 A0A0J9YXY3 114 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 PLAC8L1A1L4L8 177 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 F8W1H4 67 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 H3BMG7 143 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 H7C2G1 150 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 J3QR89 54 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 IGHV3-30P01768 117 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 GIG44P09565 113 aaPredicted RBP1.96□□□□□ -2.1
CALD1-221ENST00000489019 DNAH10OSP0CZ25 163 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 LINC00694P0DN24 101 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 IGHV3-30-5P0DP03 117 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 KRTAP12-2P59991 146 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 DAD1P61803 113 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 DEFB135Q30KP9 77 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 OCIAD2Q56VL3 154 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 FAM222AQ5U5X8 452 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 SFTA2Q6UW10 78 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 NTM-AS1Q6ZSK4 140 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 CSNK1G2-AS1Q8NCQ2 148 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 ATP6V0E2Q8NHE4 81 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 COPS9Q8WXC6 57 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 ZNF625Q96I27 306 aaPredicted RBP1.96□□□□□ -2.1
CALD1-221ENST00000489019 CDC42SE2Q9NRR3 84 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 TOMM7Q9P0U1 55 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 CDKN2A-AS1Q9UH64 79 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 PRO1854Q9UHT4 67 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 ERG28Q9UKR5 140 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 PKD1L2Q7Z442 2459 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 SPTBN4Q9H254 2564 aa1.96□□□□□ -2.1
CALD1-221ENST00000489019 CSMD1Q96PZ7 3565 aa1.95□□□□□ -2.1
CALD1-221ENST00000489019 TRBV20-1A0A075B6N2 111 aa1.95□□□□□ -2.1
CALD1-221ENST00000489019 TRBV6-8A0A0A6YYG3 113 aa1.95□□□□□ -2.1
CALD1-221ENST00000489019 A0A0B4J2C4 111 aa1.95□□□□□ -2.1
CALD1-221ENST00000489019 LYRM9A8MSI8 78 aa1.95□□□□□ -2.1
CALD1-221ENST00000489019 F5H768 121 aa1.95□□□□□ -2.1
CALD1-221ENST00000489019 NDUFA1O15239 70 aa1.95□□□□□ -2.1
CALD1-221ENST00000489019 DEFB4AO15263 64 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms