RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 RBAKDNA6NC62 111 aa4.36□□□□□ -1.71
TMEM39A-209ENST00000486235 IGLV2-11P01706 119 aa4.36□□□□□ -1.71
TMEM39A-209ENST00000486235 RPL7P18124 248 aaKnown RBP4.36□□□□□ -1.71
TMEM39A-209ENST00000486235 EVI2AP22794 236 aa4.36□□□□□ -1.71
TMEM39A-209ENST00000486235 PLNP26678 52 aa4.36□□□□□ -1.71
TMEM39A-209ENST00000486235 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
TMEM39A-209ENST00000486235 GOLT1AQ6ZVE7 132 aa4.36□□□□□ -1.71
TMEM39A-209ENST00000486235 PRNTQ86SH4 94 aa4.36□□□□□ -1.71
TMEM39A-209ENST00000486235 VSIG2Q96IQ7 327 aa4.36□□□□□ -1.71
TMEM39A-209ENST00000486235 SPCS1Q9Y6A9 102 aa4.36□□□□□ -1.71
TMEM39A-209ENST00000486235 H3BNG1 76 aa4.35□□□□□ -1.71
TMEM39A-209ENST00000486235 DPM2O94777 84 aa4.35□□□□□ -1.71
TMEM39A-209ENST00000486235 PPP1R17O96001 155 aa4.35□□□□□ -1.71
TMEM39A-209ENST00000486235 ARMS2P0C7Q2 107 aa4.35□□□□□ -1.71
TMEM39A-209ENST00000486235 FCER1GP30273 86 aa4.35□□□□□ -1.71
TMEM39A-209ENST00000486235 CKS2P33552 79 aa4.35□□□□□ -1.71
TMEM39A-209ENST00000486235 GNG5P63218 68 aa4.35□□□□□ -1.71
TMEM39A-209ENST00000486235 GAGE5Q13069 117 aa4.35□□□□□ -1.71
TMEM39A-209ENST00000486235 GAGE6Q13070 117 aa4.35□□□□□ -1.71
TMEM39A-209ENST00000486235 Q6ZTI0 123 aa4.35□□□□□ -1.71
TMEM39A-209ENST00000486235 ATP6V0E2Q8NHE4 81 aa4.35□□□□□ -1.71
TMEM39A-209ENST00000486235 SIGMAR1Q99720 223 aa4.35□□□□□ -1.71
TMEM39A-209ENST00000486235 VGLL1Q99990 258 aa4.35□□□□□ -1.71
TMEM39A-209ENST00000486235 HMCN2Q8NDA2 5059 aa4.35□□□□□ -1.71
TMEM39A-209ENST00000486235 DNAH8Q96JB1 4490 aa4.34□□□□□ -1.71
TMEM39A-209ENST00000486235 TRGV2A0A075B6R0 118 aa4.34□□□□□ -1.71
TMEM39A-209ENST00000486235 A0A087WYN8 130 aa4.34□□□□□ -1.71
TMEM39A-209ENST00000486235 A0A087WZ39 114 aa4.34□□□□□ -1.71
TMEM39A-209ENST00000486235 D6R8Y8 96 aa4.34□□□□□ -1.71
TMEM39A-209ENST00000486235 H3BUT2 72 aa4.34□□□□□ -1.71
TMEM39A-209ENST00000486235 C6orf226Q5I0X4 101 aa4.34□□□□□ -1.71
TMEM39A-209ENST00000486235 NFE4Q86UQ8 179 aa4.34□□□□□ -1.71
TMEM39A-209ENST00000486235 PRR26Q8N8Z3 221 aa4.34□□□□□ -1.71
TMEM39A-209ENST00000486235 ZC2HC1AQ96GY0 325 aa4.34□□□□□ -1.71
TMEM39A-209ENST00000486235 IGLV5-45A0A087WSX0 123 aa4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 TRGV1A0A0A0MS02 117 aa4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 TRAV12-1A0A0B4J245 112 aa4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 TRAV12-3A0A0B4J271 114 aa4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 FABP5P3A8MUU1 101 aa4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 PRAC2D3DTV9 90 aa4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 IGHV3-53P01767 116 aa4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 IGKCP01834 107 aa4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 IGLC6P0CF74 106 aa4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 IFI27P40305 119 aaPredicted RBP4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 CACNG7P62955 275 aa4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 SRSF9Q13242 221 aaKnown RBP eCLIP4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 LINC00173Q6ZV60 143 aa4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 AMN1Q8IY45 258 aa4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 SLC50A1Q9BRV3 221 aa4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 LENEPQ9Y5L5 61 aa4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 ICOSQ9Y6W8 199 aa4.33□□□□□ -1.72
TMEM39A-209ENST00000486235 A0A096LNJ9 63 aa4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 IGLV9-49A0A0B4J1Y8 123 aa4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 A0A1B0GWB2 263 aa4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 E9PLD3 99 aa4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 M0QXV9 152 aa4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 MRPS12O15235 138 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 PRSS2P07478 247 aa4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 DAZ2Q13117 558 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 MRPL51Q4U2R6 128 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 ORMDL2Q53FV1 153 aa4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 LYPD5Q6UWN5 251 aa4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 LYZL1Q6UWQ5 148 aa4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 Q6ZVQ6 151 aa4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 CEND1Q8N111 149 aa4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 Q8N8P6 123 aa4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 MRAP2Q96G30 205 aa4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 LINC00467Q9BRT7 94 aa4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 CHAC1Q9BUX1 264 aa4.32□□□□□ -1.72
TMEM39A-209ENST00000486235 TRBV20-1A0A075B6N2 111 aa4.31□□□□□ -1.72
TMEM39A-209ENST00000486235 SH2D1AO60880 128 aa4.31□□□□□ -1.72
TMEM39A-209ENST00000486235 LEPP41159 167 aa4.31□□□□□ -1.72
TMEM39A-209ENST00000486235 NMUP48645 174 aa4.31□□□□□ -1.72
TMEM39A-209ENST00000486235 RPL36AP83881 106 aaKnown RBP4.31□□□□□ -1.72
TMEM39A-209ENST00000486235 Q6ZVH6 145 aa4.31□□□□□ -1.72
TMEM39A-209ENST00000486235 WFDC10BQ8IUB3 73 aa4.31□□□□□ -1.72
TMEM39A-209ENST00000486235 SPANXDQ9BXN6 97 aa4.31□□□□□ -1.72
TMEM39A-209ENST00000486235 GEMIN7Q9H840 131 aaKnown RBP4.31□□□□□ -1.72
TMEM39A-209ENST00000486235 LRP1Q07954 4544 aaKnown RBP4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 TRBV25-1A0A075B6N4 114 aa4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 TRBV7-9A0A0J9YWB2 115 aa4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 TMEM262E9PQX1 116 aa4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 H3BMG7 143 aa4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 H7C1H1 209 aa4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 PSCAO43653 123 aa4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 CRYGDP07320 174 aa4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 PRSS1P07477 247 aa4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 LAGE3Q14657 143 aa4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 MRPL23Q16540 153 aaKnown RBP4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 EXOC3-AS1Q8N2X6 119 aa4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 C11orf72Q8NBR9 251 aa4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 C20orf78Q9BR46 151 aa4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 MRPL16Q9NX20 251 aaKnown RBP4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 HHLA3Q9XRX5 114 aa4.3□□□□□ -1.72
TMEM39A-209ENST00000486235 A0A087WX48 190 aa4.29□□□□□ -1.72
TMEM39A-209ENST00000486235 TRAV8-1A0A0A6YYK1 113 aa4.29□□□□□ -1.72
TMEM39A-209ENST00000486235 LRCOL1A6NCL2 159 aa4.29□□□□□ -1.72
TMEM39A-209ENST00000486235 F8VRH5 84 aa4.29□□□□□ -1.72
TMEM39A-209ENST00000486235 M0R381 172 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms