RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 MAJINQ3KP22 176 aa8.16□□□□□ -1.1
HDAC1-209ENST00000484305 COMMD7Q86VX2 200 aa8.16□□□□□ -1.1
HDAC1-209ENST00000484305 SEC11CQ9BY50 192 aa8.16□□□□□ -1.1
HDAC1-209ENST00000484305 CTDSP1Q9GZU7 261 aa8.16□□□□□ -1.1
HDAC1-209ENST00000484305 PLAC8Q9NZF1 115 aa8.16□□□□□ -1.1
HDAC1-209ENST00000484305 KRTAP29-1A8MX34 341 aaPredicted RBP8.15□□□□□ -1.1
HDAC1-209ENST00000484305 Q8N8P6 123 aa8.15□□□□□ -1.1
HDAC1-209ENST00000484305 IGHV3OR16-9A0A0B4J2B5 98 aa8.14□□□□□ -1.11
HDAC1-209ENST00000484305 IFITM10A6NMD0 228 aa8.14□□□□□ -1.11
HDAC1-209ENST00000484305 IFI27P40305 119 aaPredicted RBP8.14□□□□□ -1.11
HDAC1-209ENST00000484305 Q6ZRU5 148 aa8.14□□□□□ -1.11
HDAC1-209ENST00000484305 PYGO1Q9Y3Y4 419 aa8.14□□□□□ -1.11
HDAC1-209ENST00000484305 IGLV4-3A0A075B6K6 122 aa8.13□□□□□ -1.11
HDAC1-209ENST00000484305 APOMO95445 188 aa8.13□□□□□ -1.11
HDAC1-209ENST00000484305 KIAA1644Q3SXP7 199 aa8.13□□□□□ -1.11
HDAC1-209ENST00000484305 C2orf66Q6UXQ4 117 aa8.13□□□□□ -1.11
HDAC1-209ENST00000484305 STPG4Q8N801 248 aa8.13□□□□□ -1.11
HDAC1-209ENST00000484305 LRP1Q07954 4544 aaKnown RBP8.13□□□□□ -1.11
HDAC1-209ENST00000484305 TRAV9-1A0A075B6T8 112 aa8.12□□□□□ -1.11
HDAC1-209ENST00000484305 C10orf91Q5T1B1 145 aa8.12□□□□□ -1.11
HDAC1-209ENST00000484305 TMEM141Q96I45 108 aa8.12□□□□□ -1.11
HDAC1-209ENST00000484305 C2orf48Q96LS8 159 aa8.12□□□□□ -1.11
HDAC1-209ENST00000484305 CAMK2N2Q96S95 79 aa8.12□□□□□ -1.11
HDAC1-209ENST00000484305 SPAG11BQ08648 103 aa8.11□□□□□ -1.11
HDAC1-209ENST00000484305 ORMDL2Q53FV1 153 aa8.11□□□□□ -1.11
HDAC1-209ENST00000484305 LINC00242Q5T6M2 205 aa8.11□□□□□ -1.11
HDAC1-209ENST00000484305 ZC2HC1BQ5TFG8 222 aa8.11□□□□□ -1.11
HDAC1-209ENST00000484305 OR10D4PQ8NGN7 298 aa8.11□□□□□ -1.11
HDAC1-209ENST00000484305 ORAOV1Q8WV07 137 aa8.11□□□□□ -1.11
HDAC1-209ENST00000484305 NXT2Q9NPJ8 142 aaKnown RBP8.11□□□□□ -1.11
HDAC1-209ENST00000484305 LINC00474Q9P2X8 69 aa8.11□□□□□ -1.11
HDAC1-209ENST00000484305 CYSLTR1Q9Y271 337 aa8.11□□□□□ -1.11
HDAC1-209ENST00000484305 PKIGQ9Y2B9 76 aa8.11□□□□□ -1.11
HDAC1-209ENST00000484305 LOC107984640A0A0U1RRK4 108 aa8.1□□□□□ -1.11
HDAC1-209ENST00000484305 S100PP25815 95 aa8.1□□□□□ -1.11
HDAC1-209ENST00000484305 PTTG1IPP53801 180 aa8.1□□□□□ -1.11
HDAC1-209ENST00000484305 PKHD1L1Q86WI1 4243 aa8.09□□□□□ -1.11
HDAC1-209ENST00000484305 TGIF2-C20orf24A0A0A6YYL0 155 aa8.09□□□□□ -1.11
HDAC1-209ENST00000484305 A0A0J9YXV3 536 aa8.09□□□□□ -1.11
HDAC1-209ENST00000484305 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.09□□□□□ -1.11
HDAC1-209ENST00000484305 K7EMI3 77 aa8.09□□□□□ -1.11
HDAC1-209ENST00000484305 UBE2D1P51668 147 aa8.09□□□□□ -1.11
HDAC1-209ENST00000484305 GAGE2BQ13066 116 aa8.09□□□□□ -1.11
HDAC1-209ENST00000484305 TEX43Q6ZNM6 134 aa8.09□□□□□ -1.11
HDAC1-209ENST00000484305 LINC00173Q6ZV60 143 aa8.09□□□□□ -1.11
HDAC1-209ENST00000484305 C7orf33Q8WU49 177 aa8.09□□□□□ -1.11
HDAC1-209ENST00000484305 GNB1LQ9BYB4 327 aa8.09□□□□□ -1.11
HDAC1-209ENST00000484305 CARHSP1Q9Y2V2 147 aaKnown RBP8.09□□□□□ -1.11
HDAC1-209ENST00000484305 A0A087WZ39 114 aa8.08□□□□□ -1.12
HDAC1-209ENST00000484305 IGIPA6NJ69 53 aa8.08□□□□□ -1.12
HDAC1-209ENST00000484305 OXTP01178 125 aa8.08□□□□□ -1.12
HDAC1-209ENST00000484305 AMELXQ99217 191 aa8.08□□□□□ -1.12
HDAC1-209ENST00000484305 RPS10P5Q9NQ39 176 aa8.08□□□□□ -1.12
HDAC1-209ENST00000484305 FAT3Q8TDW7 4589 aa8.08□□□□□ -1.12
HDAC1-209ENST00000484305 RHEBQ15382 184 aa8.07□□□□□ -1.12
HDAC1-209ENST00000484305 RNF151Q2KHN1 245 aa8.07□□□□□ -1.12
HDAC1-209ENST00000484305 C10orf25Q5T742 122 aa8.07□□□□□ -1.12
HDAC1-209ENST00000484305 Q6ZN92 141 aa8.07□□□□□ -1.12
HDAC1-209ENST00000484305 C2orf88Q9BSF0 95 aa8.07□□□□□ -1.12
HDAC1-209ENST00000484305 VCX2Q9H322 139 aa8.07□□□□□ -1.12
HDAC1-209ENST00000484305 NPSP0C0P6 89 aa8.06□□□□□ -1.12
HDAC1-209ENST00000484305 RPL18AQ02543 176 aaKnown RBP8.06□□□□□ -1.12
HDAC1-209ENST00000484305 KIAA0087Q14695 138 aa8.06□□□□□ -1.12
HDAC1-209ENST00000484305 UNQ6190/PRO20217Q6UXQ8 127 aa8.06□□□□□ -1.12
HDAC1-209ENST00000484305 TOMM6Q96B49 74 aa8.06□□□□□ -1.12
HDAC1-209ENST00000484305 ALKBH7Q9BT30 221 aaPredicted RBP8.06□□□□□ -1.12
HDAC1-209ENST00000484305 MRPL35Q9NZE8 188 aaKnown RBP8.06□□□□□ -1.12
HDAC1-209ENST00000484305 A0A1W2PNN7 141 aa8.05□□□□□ -1.12
HDAC1-209ENST00000484305 F8WDY8 70 aa8.05□□□□□ -1.12
HDAC1-209ENST00000484305 NDUFA1O15239 70 aa8.05□□□□□ -1.12
HDAC1-209ENST00000484305 PRR3P79522 188 aaKnown RBP8.05□□□□□ -1.12
HDAC1-209ENST00000484305 MRPL18Q9H0U6 180 aaKnown RBP8.05□□□□□ -1.12
HDAC1-209ENST00000484305 LINC01546A6NGU7 62 aa8.04□□□□□ -1.12
HDAC1-209ENST00000484305 LORP23490 312 aaPredicted RBP8.04□□□□□ -1.12
HDAC1-209ENST00000484305 G0S2P27469 103 aa8.04□□□□□ -1.12
HDAC1-209ENST00000484305 COX19Q49B96 90 aa8.04□□□□□ -1.12
HDAC1-209ENST00000484305 FAM19A3Q7Z5A8 133 aa8.04□□□□□ -1.12
HDAC1-209ENST00000484305 TIMM17AQ99595 171 aa8.04□□□□□ -1.12
HDAC1-209ENST00000484305 C6orf48Q9UBA6 75 aa8.04□□□□□ -1.12
HDAC1-209ENST00000484305 MT-ND6P03923 174 aa8.03□□□□□ -1.12
HDAC1-209ENST00000484305 FABP9Q0Z7S8 132 aa8.03□□□□□ -1.12
HDAC1-209ENST00000484305 C9orf116Q5BN46 136 aaPredicted RBP8.03□□□□□ -1.12
HDAC1-209ENST00000484305 C2orf82Q6UX34 121 aa8.03□□□□□ -1.12
HDAC1-209ENST00000484305 APOC3P02656 99 aa8.02□□□□□ -1.13
HDAC1-209ENST00000484305 PAPPA-AS1Q5QFB9 102 aa8.02□□□□□ -1.13
HDAC1-209ENST00000484305 Q6ZRP5 223 aa8.02□□□□□ -1.13
HDAC1-209ENST00000484305 ERASQ7Z444 233 aa8.02□□□□□ -1.13
HDAC1-209ENST00000484305 LINC01561Q8N1V8 128 aa8.02□□□□□ -1.13
HDAC1-209ENST00000484305 SCGB3A1Q96QR1 104 aa8.02□□□□□ -1.13
HDAC1-209ENST00000484305 TLX1NBP0CAT3 122 aa8.01□□□□□ -1.13
HDAC1-209ENST00000484305 CDKN2A-AS1Q9UH64 79 aa8.01□□□□□ -1.13
HDAC1-209ENST00000484305 HERVK_113P63121 156 aa8□□□□□ -1.13
HDAC1-209ENST00000484305 TRBV30A0A0K0K1B3 111 aa7.99□□□□□ -1.13
HDAC1-209ENST00000484305 FAM168BA1KXE4 195 aa7.99□□□□□ -1.13
HDAC1-209ENST00000484305 SNAPINO95295 136 aa7.99□□□□□ -1.13
HDAC1-209ENST00000484305 MT1HL1P0DM35 61 aa7.99□□□□□ -1.13
HDAC1-209ENST00000484305 SEC11AP67812 179 aa7.99□□□□□ -1.13
HDAC1-209ENST00000484305 GAGE2EQ4V326 116 aa7.99□□□□□ -1.13
HDAC1-209ENST00000484305 FA2HQ7L5A8 372 aa7.99□□□□□ -1.13
HDAC1-209ENST00000484305 PHF5AQ7RTV0 110 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms