RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	FOXI1	Q12951	378 aa		10.16	□□□□□ -0.78
CCM2-215	ENST00000482714	C14orf177	Q52M58	125 aa		10.16	□□□□□ -0.78
CCM2-215	ENST00000482714	LINC01561	Q8N1V8	128 aa		10.16	□□□□□ -0.78
CCM2-215	ENST00000482714		A0A087WTM6	91 aa		10.15	□□□□□ -0.78
CCM2-215	ENST00000482714	TNP2	Q05952	138 aa		10.15	□□□□□ -0.78
CCM2-215	ENST00000482714	FAT2	Q9NYQ8	4349 aa		10.15	□□□□□ -0.79
CCM2-215	ENST00000482714	TINCR	A0A1B0GVN0	87 aa		10.14	□□□□□ -0.79
CCM2-215	ENST00000482714	ZC2HC1B	Q5TFG8	222 aa		10.14	□□□□□ -0.79
CCM2-215	ENST00000482714	COX7A2L	O14548	114 aa		10.13	□□□□□ -0.79
CCM2-215	ENST00000482714	FABP4	P15090	132 aa		10.13	□□□□□ -0.79
CCM2-215	ENST00000482714	MAP1LC3C	Q9BXW4	147 aa		10.13	□□□□□ -0.79
CCM2-215	ENST00000482714	GEMIN7	Q9H840	131 aa	Known RBP	10.13	□□□□□ -0.79
CCM2-215	ENST00000482714		A0A087WZ39	114 aa		10.12	□□□□□ -0.79
CCM2-215	ENST00000482714	APOM	O95445	188 aa		10.12	□□□□□ -0.79
CCM2-215	ENST00000482714	IGHV1-58	A0A0C4DH39	117 aa		10.11	□□□□□ -0.79
CCM2-215	ENST00000482714	MAL	P21145	153 aa		10.11	□□□□□ -0.79
CCM2-215	ENST00000482714	SPATA12	Q7Z6I5	190 aa		10.11	□□□□□ -0.79
CCM2-215	ENST00000482714	PGPEP1	Q9NXJ5	209 aa		10.11	□□□□□ -0.79
CCM2-215	ENST00000482714	IGLV5-45	A0A087WSX0	123 aa		10.1	□□□□□ -0.79
CCM2-215	ENST00000482714		A0A0J9YXV3	536 aa		10.1	□□□□□ -0.79
CCM2-215	ENST00000482714	USP17L23	D6RBM5	183 aa		10.1	□□□□□ -0.79
CCM2-215	ENST00000482714	IGLC3	P0DOY3	106 aa		10.1	□□□□□ -0.79
CCM2-215	ENST00000482714	COX6A2	Q02221	97 aa		10.1	□□□□□ -0.79
CCM2-215	ENST00000482714	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.1	□□□□□ -0.79
CCM2-215	ENST00000482714		F8VRH5	84 aa		10.1	□□□□□ -0.79
CCM2-215	ENST00000482714	S100A2	P29034	98 aa		10.1	□□□□□ -0.79
CCM2-215	ENST00000482714	C5orf38	Q86SI9	138 aa		10.1	□□□□□ -0.79
CCM2-215	ENST00000482714		Q8N814	137 aa		10.1	□□□□□ -0.79
CCM2-215	ENST00000482714	C5orf52	A6NGY3	159 aa		10.09	□□□□□ -0.79
CCM2-215	ENST00000482714	NTN5	Q8WTR8	489 aa	Predicted RBP	10.09	□□□□□ -0.79
CCM2-215	ENST00000482714	HIST3H2BB	Q8N257	126 aa		10.08	□□□□□ -0.8
CCM2-215	ENST00000482714	IGHV3-64	A0A075B6Q5	118 aa		10.07	□□□□□ -0.8
CCM2-215	ENST00000482714	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.07	□□□□□ -0.8
CCM2-215	ENST00000482714		F8WDY8	70 aa		10.07	□□□□□ -0.8
CCM2-215	ENST00000482714		H3BRM9	83 aa		10.07	□□□□□ -0.8
CCM2-215	ENST00000482714	SNRPE	P62304	92 aa	Known RBP	10.07	□□□□□ -0.8
CCM2-215	ENST00000482714	PET117	Q6UWS5	81 aa		10.07	□□□□□ -0.8
CCM2-215	ENST00000482714	OR10D4P	Q8NGN7	298 aa		10.07	□□□□□ -0.8
CCM2-215	ENST00000482714	CDKN2A-AS1	Q9UH64	79 aa		10.07	□□□□□ -0.8
CCM2-215	ENST00000482714	DNAH11	Q96DT5	4516 aa		10.06	□□□□□ -0.8
CCM2-215	ENST00000482714	HECTD4	Q9Y4D8	3996 aa		10.06	□□□□□ -0.8
CCM2-215	ENST00000482714	IGLV4-69	A0A075B6H9	119 aa		10.06	□□□□□ -0.8
CCM2-215	ENST00000482714		A0A1B0GVY2	172 aa		10.06	□□□□□ -0.8
CCM2-215	ENST00000482714	SYS1-DBNDD2	H3BUS1	97 aa		10.06	□□□□□ -0.8
CCM2-215	ENST00000482714	WFDC2	Q14508	124 aa		10.06	□□□□□ -0.8
CCM2-215	ENST00000482714	ODF1	Q14990	250 aa		10.06	□□□□□ -0.8
CCM2-215	ENST00000482714	CDPF1	Q6NVV7	123 aa		10.06	□□□□□ -0.8
CCM2-215	ENST00000482714	LINC00469	Q8N7U9	141 aa		10.06	□□□□□ -0.8
CCM2-215	ENST00000482714	C15orf56	Q8N910	161 aa		10.06	□□□□□ -0.8
CCM2-215	ENST00000482714	ZNF561-AS1	K7EIQ3	104 aa		10.05	□□□□□ -0.8
CCM2-215	ENST00000482714	AKR1D1	P51857	326 aa		10.05	□□□□□ -0.8
CCM2-215	ENST00000482714	CHAC1	Q9BUX1	264 aa		10.05	□□□□□ -0.8
CCM2-215	ENST00000482714	MRPL35	Q9NZE8	188 aa	Known RBP	10.05	□□□□□ -0.8
CCM2-215	ENST00000482714	LECT2	O14960	151 aa		10.04	□□□□□ -0.8
CCM2-215	ENST00000482714	PLN	P26678	52 aa		10.04	□□□□□ -0.8
CCM2-215	ENST00000482714	HIST1H2BL	Q99880	126 aa		10.04	□□□□□ -0.8
CCM2-215	ENST00000482714	hDV102S1	A0JD36	115 aa		10.04	□□□□□ -0.8
CCM2-215	ENST00000482714	C11orf86	A6NJI1	115 aa		10.04	□□□□□ -0.8
CCM2-215	ENST00000482714	CNBP	P62633	177 aa	Known RBP	10.04	□□□□□ -0.8
CCM2-215	ENST00000482714	C2orf48	Q96LS8	159 aa		10.04	□□□□□ -0.8
CCM2-215	ENST00000482714	PKD1	P98161	4303 aa		10.03	□□□□□ -0.8
CCM2-215	ENST00000482714	C3orf79	P0CE67	100 aa		10.03	□□□□□ -0.8
CCM2-215	ENST00000482714	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.02	□□□□□ -0.81
CCM2-215	ENST00000482714		H0Y8G0	127 aa		10.02	□□□□□ -0.81
CCM2-215	ENST00000482714	DPM2	O94777	84 aa		10.02	□□□□□ -0.81
CCM2-215	ENST00000482714	ZNF22	P17026	224 aa	Predicted RBP	10.02	□□□□□ -0.81
CCM2-215	ENST00000482714	LINC01545	Q5VT33	79 aa		10.02	□□□□□ -0.81
CCM2-215	ENST00000482714	ORAOV1	Q8WV07	137 aa		10.02	□□□□□ -0.81
CCM2-215	ENST00000482714	TMEM170B	Q5T4T1	132 aa		10.01	□□□□□ -0.81
CCM2-215	ENST00000482714	C20orf202	A1L168	122 aa		10	□□□□□ -0.81
CCM2-215	ENST00000482714	SMIM1	B2RUZ4	78 aa		10	□□□□□ -0.81
CCM2-215	ENST00000482714	IGKC	P01834	107 aa		10	□□□□□ -0.81
CCM2-215	ENST00000482714	KRTDAP	P60985	99 aa		10	□□□□□ -0.81
CCM2-215	ENST00000482714		Q8IZM0	81 aa		10	□□□□□ -0.81
CCM2-215	ENST00000482714	IGLV5-52	A0A0A0MRZ9	124 aa		9.99	□□□□□ -0.81
CCM2-215	ENST00000482714	PRSS2	P07478	247 aa		9.99	□□□□□ -0.81
CCM2-215	ENST00000482714	SPAG11B	Q08648	103 aa		9.99	□□□□□ -0.81
CCM2-215	ENST00000482714	KIAA0087	Q14695	138 aa		9.99	□□□□□ -0.81
CCM2-215	ENST00000482714	HIGD2B	Q4VC39	106 aa		9.99	□□□□□ -0.81
CCM2-215	ENST00000482714	C6orf226	Q5I0X4	101 aa		9.99	□□□□□ -0.81
CCM2-215	ENST00000482714	C9orf163	Q8N9P6	203 aa		9.99	□□□□□ -0.81
CCM2-215	ENST00000482714	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	9.98	□□□□□ -0.81
CCM2-215	ENST00000482714	IGLV5-39	A0A0G2JS06	123 aa		9.98	□□□□□ -0.81
CCM2-215	ENST00000482714	CXCL5	P42830	114 aa		9.98	□□□□□ -0.81
CCM2-215	ENST00000482714	KRTAP10-2	P60368	255 aa		9.98	□□□□□ -0.81
CCM2-215	ENST00000482714	SYCN	Q0VAF6	134 aa		9.98	□□□□□ -0.81
CCM2-215	ENST00000482714	TMEM223	A0PJW6	202 aa		9.98	□□□□□ -0.81
CCM2-215	ENST00000482714	SLPI	P03973	132 aa		9.98	□□□□□ -0.81
CCM2-215	ENST00000482714	RNF151	Q2KHN1	245 aa		9.98	□□□□□ -0.81
CCM2-215	ENST00000482714	PKIG	Q9Y2B9	76 aa		9.98	□□□□□ -0.81
CCM2-215	ENST00000482714	NDUFA1	O15239	70 aa		9.97	□□□□□ -0.81
CCM2-215	ENST00000482714	SPINK8	P0C7L1	97 aa		9.97	□□□□□ -0.81
CCM2-215	ENST00000482714	SFTA2	Q6UW10	78 aa		9.97	□□□□□ -0.81
CCM2-215	ENST00000482714	CAMK2N2	Q96S95	79 aa		9.97	□□□□□ -0.81
CCM2-215	ENST00000482714	GCSH	P23434	173 aa		9.96	□□□□□ -0.82
CCM2-215	ENST00000482714	CKS1B	P61024	79 aa		9.96	□□□□□ -0.82
CCM2-215	ENST00000482714	COX7B2	Q8TF08	81 aa		9.96	□□□□□ -0.82
CCM2-215	ENST00000482714	DNAH5	Q8TE73	4624 aa		9.95	□□□□□ -0.82
CCM2-215	ENST00000482714	HERVK_113	P61574	105 aa		9.95	□□□□□ -0.82
CCM2-215	ENST00000482714	PMCHL2	Q9BQD1	86 aa		9.95	□□□□□ -0.82

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