RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 TRAV21A0A0B4J279 112 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 A0A0B4J2C4 111 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 MUC21A0A0G2JKD1 596 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 MUC21A0A140T8X8 626 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 GRIFINA4D1Z8 144 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 TMEM189A5PLL7 270 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 NUPR2A6NF83 97 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 H3BVH4 76 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 SPINK4O60575 86 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 IFNA1P01562 189 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 NMBP08949 121 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 SFTA3P0C7M3 94 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 RNASE3P12724 160 aaKnown RBP2.49□□□□□ -2.01
UPF3A-207ENST00000481131 S100A2P29034 98 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 CEBPGP53567 150 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 TCL1AP56279 114 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 IFITM2Q01629 132 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 CENPWQ5EE01 88 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 FAM162BQ5T6X4 162 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 BAGE2Q86Y30 109 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 UBE2WQ96B02 151 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 FAM210AQ96ND0 272 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 LINC00467Q9BRT7 94 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 NKX6-2Q9C056 277 aaPredicted RBP2.49□□□□□ -2.01
UPF3A-207ENST00000481131 MED9Q9NWA0 146 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 APLNQ9ULZ1 77 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 SACSQ9NZJ4 4579 aa2.49□□□□□ -2.01
UPF3A-207ENST00000481131 RYR3Q15413 4870 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 TRGV2A0A075B6R0 118 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 IGHV3-73A0A0B4J1V6 119 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 A0A0J9YY99 117 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 TRBV6-1A0A0K0K1D8 114 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 FABP5P3A8MUU1 101 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 B4DEV8 164 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 C9JCJ5 164 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 F5H768 121 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 TMEM250H0YL14 139 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 PDE6DO43924 150 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 NDUFS6O75380 124 aaKnown RBP2.48□□□□□ -2.01
UPF3A-207ENST00000481131 IGLV6-57P01721 117 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 ORM1P02763 201 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 ATP5G1P05496 136 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 IGKV4-1P06312 121 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 SRP19P09132 144 aaKnown RBP2.48□□□□□ -2.01
UPF3A-207ENST00000481131 GZMBP10144 247 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 MGST1P10620 155 aaKnown RBP2.48□□□□□ -2.01
UPF3A-207ENST00000481131 TDRG1Q3Y452 100 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 SAPCD1Q5SSQ6 148 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 IBA57Q5T440 356 aaKnown RBP2.48□□□□□ -2.01
UPF3A-207ENST00000481131 C3orf22Q8N5N4 141 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 TCEAL7Q9BRU2 100 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 EIF5A2Q9GZV4 153 aaKnown RBP2.48□□□□□ -2.01
UPF3A-207ENST00000481131 ZFP30Q9Y2G7 519 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 VPS13DQ5THJ4 4388 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 FRAS1Q86XX4 4008 aa2.48□□□□□ -2.01
UPF3A-207ENST00000481131 A0A096LPF7 62 aa2.47□□□□□ -2.01
UPF3A-207ENST00000481131 LCE6AA0A183 80 aa2.47□□□□□ -2.01
UPF3A-207ENST00000481131 C19orf71A6NCJ1 209 aa2.47□□□□□ -2.01
UPF3A-207ENST00000481131 LY6G6CO95867 125 aa2.47□□□□□ -2.01
UPF3A-207ENST00000481131 ARMS2P0C7Q2 107 aa2.47□□□□□ -2.01
UPF3A-207ENST00000481131 ASIPP42127 132 aa2.47□□□□□ -2.01
UPF3A-207ENST00000481131 GNG4P50150 75 aa2.47□□□□□ -2.01
UPF3A-207ENST00000481131 OR10AG1Q8NH19 301 aa2.47□□□□□ -2.01
UPF3A-207ENST00000481131 SMIM7Q9BQ49 75 aa2.47□□□□□ -2.01
UPF3A-207ENST00000481131 TXNDC17Q9BRA2 123 aa2.47□□□□□ -2.01
UPF3A-207ENST00000481131 RNASE7Q9H1E1 156 aaKnown RBP2.47□□□□□ -2.01
UPF3A-207ENST00000481131 KLK5Q9Y337 293 aaPredicted RBP2.47□□□□□ -2.01
UPF3A-207ENST00000481131 TRAV4A0A0B4J268 109 aa2.46□□□□□ -2.02
UPF3A-207ENST00000481131 M0R2P5 195 aa2.46□□□□□ -2.02
UPF3A-207ENST00000481131 M0R381 172 aa2.46□□□□□ -2.02
UPF3A-207ENST00000481131 P0DMU3 169 aa2.46□□□□□ -2.02
UPF3A-207ENST00000481131 FAM231AP0DMU4 169 aa2.46□□□□□ -2.02
UPF3A-207ENST00000481131 FAM231CP0DMU5 169 aa2.46□□□□□ -2.02
UPF3A-207ENST00000481131 S100A4P26447 101 aaKnown RBP2.46□□□□□ -2.02
UPF3A-207ENST00000481131 LGALS9BQ3B8N2 356 aa2.46□□□□□ -2.02
UPF3A-207ENST00000481131 CFAP126Q5VTH2 177 aa2.46□□□□□ -2.02
UPF3A-207ENST00000481131 OR2D3Q8NGH3 330 aa2.46□□□□□ -2.02
UPF3A-207ENST00000481131 IL36BQ9NZH7 164 aa2.46□□□□□ -2.02
UPF3A-207ENST00000481131 URGCP-MRPS24S4R325 110 aa2.46□□□□□ -2.02
UPF3A-207ENST00000481131 PCLOQ9Y6V0 5065 aa2.46□□□□□ -2.02
UPF3A-207ENST00000481131 TRGV4A0A0C4DH28 118 aa2.45□□□□□ -2.02
UPF3A-207ENST00000481131 A6NED7 52 aa2.45□□□□□ -2.02
UPF3A-207ENST00000481131 ZNF727A8MUV8 499 aa2.45□□□□□ -2.02
UPF3A-207ENST00000481131 IGLC6P0CF74 106 aa2.45□□□□□ -2.02
UPF3A-207ENST00000481131 CRYBA4P53673 196 aa2.45□□□□□ -2.02
UPF3A-207ENST00000481131 ADIRFQ15847 76 aa2.45□□□□□ -2.02
UPF3A-207ENST00000481131 CLLU1Q5K131 121 aa2.45□□□□□ -2.02
UPF3A-207ENST00000481131 FAM74A4Q5TZK3 123 aa2.45□□□□□ -2.02
UPF3A-207ENST00000481131 LYZL1Q6UWQ5 148 aa2.45□□□□□ -2.02
UPF3A-207ENST00000481131 PHLDA3Q9Y5J5 127 aa2.45□□□□□ -2.02
UPF3A-207ENST00000481131 M0R2N4 97 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 CRYGDP07320 174 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 CXCL1P09341 107 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 LGALS3P17931 250 aaKnown RBP2.44□□□□□ -2.02
UPF3A-207ENST00000481131 ADCYAP1P18509 176 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 FOXA3P55318 350 aaPredicted RBP2.44□□□□□ -2.02
UPF3A-207ENST00000481131 MP68P56378 58 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 RAB14P61106 215 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 PEA15Q15121 130 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 ESRGQ1W209 222 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms