RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 IGHV3OR16-9A0A0B4J2B5 98 aa9.49□□□□□ -0.89
DDX56-210ENST00000479440 SUMO2P61956 95 aaKnown RBP9.49□□□□□ -0.89
DDX56-210ENST00000479440 AMN1Q8IY45 258 aa9.49□□□□□ -0.89
DDX56-210ENST00000479440 TYMSOSQ8TAI1 123 aa9.49□□□□□ -0.89
DDX56-210ENST00000479440 A0A1B0GUT8 65 aa9.48□□□□□ -0.89
DDX56-210ENST00000479440 PPP1R2P9O14990 202 aa9.48□□□□□ -0.89
DDX56-210ENST00000479440 TRBV30A0A0K0K1B3 111 aa9.47□□□□□ -0.89
DDX56-210ENST00000479440 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
DDX56-210ENST00000479440 CRYGAP11844 174 aa9.47□□□□□ -0.89
DDX56-210ENST00000479440 CDIP1Q9H305 208 aa9.47□□□□□ -0.89
DDX56-210ENST00000479440 A0A087X002 238 aa9.46□□□□□ -0.9
DDX56-210ENST00000479440 TGIF2-C20orf24A0A0A6YYL0 155 aa9.46□□□□□ -0.9
DDX56-210ENST00000479440 SMKR1H3BMG3 65 aa9.46□□□□□ -0.9
DDX56-210ENST00000479440 IFITM10A6NMD0 228 aa9.45□□□□□ -0.9
DDX56-210ENST00000479440 HIGD1CA8MV81 97 aa9.45□□□□□ -0.9
DDX56-210ENST00000479440 TCAPO15273 167 aa9.45□□□□□ -0.9
DDX56-210ENST00000479440 HBBP68871 147 aa9.45□□□□□ -0.9
DDX56-210ENST00000479440 TPRXLQ17RH7 258 aa9.45□□□□□ -0.9
DDX56-210ENST00000479440 C9orf129Q5T035 196 aaKnown RBP9.45□□□□□ -0.9
DDX56-210ENST00000479440 NRACQ8N912 160 aa9.45□□□□□ -0.9
DDX56-210ENST00000479440 PACRGQ96M98 296 aaPredicted RBP9.45□□□□□ -0.9
DDX56-210ENST00000479440 SPANXA1Q9NS26 97 aa9.45□□□□□ -0.9
DDX56-210ENST00000479440 RPL28P46779 137 aaKnown RBP9.43□□□□□ -0.9
DDX56-210ENST00000479440 RPL39P62891 51 aaKnown RBP9.42□□□□□ -0.9
DDX56-210ENST00000479440 MRPS36P82909 103 aaKnown RBP9.42□□□□□ -0.9
DDX56-210ENST00000479440 RGS21Q2M5E4 152 aa9.42□□□□□ -0.9
DDX56-210ENST00000479440 LBHQ53QV2 105 aaPredicted RBP9.42□□□□□ -0.9
DDX56-210ENST00000479440 RETNLBQ9BQ08 111 aa9.42□□□□□ -0.9
DDX56-210ENST00000479440 CTDSP1Q9GZU7 261 aa9.42□□□□□ -0.9
DDX56-210ENST00000479440 TMEM250H0YL14 139 aa9.41□□□□□ -0.9
DDX56-210ENST00000479440 RIGQ13278 110 aa9.41□□□□□ -0.9
DDX56-210ENST00000479440 KIAA0087Q14695 138 aa9.41□□□□□ -0.9
DDX56-210ENST00000479440 C20orf78Q9BR46 151 aa9.4□□□□□ -0.9
DDX56-210ENST00000479440 BCE1O60756 84 aa9.39□□□□□ -0.91
DDX56-210ENST00000479440 RPL32P62910 135 aaKnown RBP9.39□□□□□ -0.91
DDX56-210ENST00000479440 C2orf82Q6UX34 121 aa9.39□□□□□ -0.91
DDX56-210ENST00000479440 C22orf24Q9Y442 160 aa9.39□□□□□ -0.91
DDX56-210ENST00000479440 FAM104AQ969W3 186 aa9.38□□□□□ -0.91
DDX56-210ENST00000479440 CEBPGP53567 150 aa9.37□□□□□ -0.91
DDX56-210ENST00000479440 LINC00173Q6ZV60 143 aa9.37□□□□□ -0.91
DDX56-210ENST00000479440 LINC00304Q8N9R0 145 aa9.37□□□□□ -0.91
DDX56-210ENST00000479440 IGLV7-46A0A075B6I9 117 aa9.36□□□□□ -0.91
DDX56-210ENST00000479440 LINC00862A6NCI5 91 aa9.36□□□□□ -0.91
DDX56-210ENST00000479440 ZNF727A8MUV8 499 aa9.36□□□□□ -0.91
DDX56-210ENST00000479440 PRSS2P07478 247 aa9.36□□□□□ -0.91
DDX56-210ENST00000479440 IFI27P40305 119 aaPredicted RBP9.36□□□□□ -0.91
DDX56-210ENST00000479440 MRPL51Q4U2R6 128 aaKnown RBP9.36□□□□□ -0.91
DDX56-210ENST00000479440 LCE2DQ5TA82 110 aaPredicted RBP9.36□□□□□ -0.91
DDX56-210ENST00000479440 SMIM2Q9BVW6 85 aa9.36□□□□□ -0.91
DDX56-210ENST00000479440 TP73-AS1Q9UF72 201 aa9.36□□□□□ -0.91
DDX56-210ENST00000479440 TRBV24-1A0A075B6N3 115 aa9.35□□□□□ -0.91
DDX56-210ENST00000479440 FAM104BQ5XKR9 115 aa9.35□□□□□ -0.91
DDX56-210ENST00000479440 MRPL55Q7Z7F7 128 aaKnown RBP9.35□□□□□ -0.91
DDX56-210ENST00000479440 LINC01551Q86U37 167 aa9.35□□□□□ -0.91
DDX56-210ENST00000479440 LINC01561Q8N1V8 128 aa9.35□□□□□ -0.91
DDX56-210ENST00000479440 LINC00469Q8N7U9 141 aa9.35□□□□□ -0.91
DDX56-210ENST00000479440 OSTCQ9NRP0 149 aa9.35□□□□□ -0.91
DDX56-210ENST00000479440 CKS2P33552 79 aa9.34□□□□□ -0.91
DDX56-210ENST00000479440 CTAG1AP78358 180 aa9.34□□□□□ -0.91
DDX56-210ENST00000479440 KRTAP13-2Q52LG2 175 aa9.34□□□□□ -0.91
DDX56-210ENST00000479440 LINC00242Q5T6M2 205 aa9.34□□□□□ -0.91
DDX56-210ENST00000479440 BATF3Q9NR55 127 aa9.34□□□□□ -0.91
DDX56-210ENST00000479440 LINC01547P58512 204 aaPredicted RBP9.33□□□□□ -0.92
DDX56-210ENST00000479440 CKS1BP61024 79 aa9.33□□□□□ -0.92
DDX56-210ENST00000479440 FAM229BQ4G0N7 80 aa9.33□□□□□ -0.92
DDX56-210ENST00000479440 SLC51BQ86UW2 128 aa9.33□□□□□ -0.92
DDX56-210ENST00000479440 SMIM7Q9BQ49 75 aa9.33□□□□□ -0.92
DDX56-210ENST00000479440 CRCT1Q9UGL9 99 aa9.33□□□□□ -0.92
DDX56-210ENST00000479440 TNFRSF6BO95407 300 aa9.32□□□□□ -0.92
DDX56-210ENST00000479440 XAGE1AQ9HD64 81 aa9.32□□□□□ -0.92
DDX56-210ENST00000479440 ANAPC11Q9NYG5 84 aa9.32□□□□□ -0.92
DDX56-210ENST00000479440 NAT8BQ9UHF3 227 aa9.32□□□□□ -0.92
DDX56-210ENST00000479440 TMEM141Q96I45 108 aa9.31□□□□□ -0.92
DDX56-210ENST00000479440 C2orf88Q9BSF0 95 aa9.31□□□□□ -0.92
DDX56-210ENST00000479440 TOMM7Q9P0U1 55 aa9.31□□□□□ -0.92
DDX56-210ENST00000479440 V9GYV3 84 aa9.31□□□□□ -0.92
DDX56-210ENST00000479440 FSIP2Q5CZC0 6907 aa9.31□□□□□ -0.92
DDX56-210ENST00000479440 IGLV4-3A0A075B6K6 122 aa9.3□□□□□ -0.92
DDX56-210ENST00000479440 Q6ZN92 141 aa9.3□□□□□ -0.92
DDX56-210ENST00000479440 TEX43Q6ZNM6 134 aa9.3□□□□□ -0.92
DDX56-210ENST00000479440 PYGO1Q9Y3Y4 419 aa9.3□□□□□ -0.92
DDX56-210ENST00000479440 IGKV2D-26A0A0A0MRZ7 120 aa9.29□□□□□ -0.92
DDX56-210ENST00000479440 A0A1B0GW15 77 aa9.29□□□□□ -0.92
DDX56-210ENST00000479440 UBE2AP49459 152 aa9.29□□□□□ -0.92
DDX56-210ENST00000479440 Q8IZM0 81 aa9.29□□□□□ -0.92
DDX56-210ENST00000479440 PPDPFQ9H3Y8 114 aa9.29□□□□□ -0.92
DDX56-210ENST00000479440 D6R8Y8 96 aa9.28□□□□□ -0.92
DDX56-210ENST00000479440 RAB5AP20339 215 aa9.28□□□□□ -0.92
DDX56-210ENST00000479440 C6orf226Q5I0X4 101 aa9.28□□□□□ -0.92
DDX56-210ENST00000479440 BLOC1S1P78537 153 aa9.27□□□□□ -0.93
DDX56-210ENST00000479440 FAM74A3Q4VXF1 159 aa9.27□□□□□ -0.93
DDX56-210ENST00000479440 RPL37AP8A6NKH3 93 aa9.26□□□□□ -0.93
DDX56-210ENST00000479440 NPYP01303 97 aa9.26□□□□□ -0.93
DDX56-210ENST00000479440 KRTAP13-1Q8IUC0 172 aa9.26□□□□□ -0.93
DDX56-210ENST00000479440 LINC00167Q96N53 147 aa9.26□□□□□ -0.93
DDX56-210ENST00000479440 ALKBH7Q9BT30 221 aaPredicted RBP9.26□□□□□ -0.93
DDX56-210ENST00000479440 EIF5A2Q9GZV4 153 aaKnown RBP9.26□□□□□ -0.93
DDX56-210ENST00000479440 F8VRH5 84 aa9.25□□□□□ -0.93
DDX56-210ENST00000479440 F8W036 122 aa9.25□□□□□ -0.93
DDX56-210ENST00000479440 PPBPP02775 128 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms