RNA–Protein interactions for RNA: ENST00000478082.5

PLOD3-212, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 1,585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-212ENST00000478082 LINC00173Q6ZV60 143 aa12.05□□□□□ -0.48
PLOD3-212ENST00000478082 C9orf163Q8N9P6 203 aa12.05□□□□□ -0.48
PLOD3-212ENST00000478082 TMEM141Q96I45 108 aa12.05□□□□□ -0.48
PLOD3-212ENST00000478082 GVQW2A0A096LPI5 108 aaPredicted RBP12.05□□□□□ -0.48
PLOD3-212ENST00000478082 CFAP161Q6P656 301 aa12.05□□□□□ -0.48
PLOD3-212ENST00000478082 C18orf32Q8TCD1 76 aa12.05□□□□□ -0.48
PLOD3-212ENST00000478082 TOMM6Q96B49 74 aa12.05□□□□□ -0.48
PLOD3-212ENST00000478082 COX7A2LO14548 114 aa12.03□□□□□ -0.48
PLOD3-212ENST00000478082 SMR3BP02814 79 aaPredicted RBP12.03□□□□□ -0.48
PLOD3-212ENST00000478082 FA2HQ7L5A8 372 aa12.03□□□□□ -0.48
PLOD3-212ENST00000478082 AP5S1Q9NUS5 200 aa12.03□□□□□ -0.48
PLOD3-212ENST00000478082 IGHV1-58A0A0C4DH39 117 aa12.02□□□□□ -0.49
PLOD3-212ENST00000478082 PANO1I0J062 215 aa12.02□□□□□ -0.49
PLOD3-212ENST00000478082 COX6A2Q02221 97 aa12.02□□□□□ -0.49
PLOD3-212ENST00000478082 TEX43Q6ZNM6 134 aa12.02□□□□□ -0.49
PLOD3-212ENST00000478082 AMELXQ99217 191 aa12.02□□□□□ -0.49
PLOD3-212ENST00000478082 LINC00242Q5T6M2 205 aa12.01□□□□□ -0.49
PLOD3-212ENST00000478082 ABCA13Q86UQ4 5058 aa12.01□□□□□ -0.49
PLOD3-212ENST00000478082 IGHV3OR16-9A0A0B4J2B5 98 aa12.01□□□□□ -0.49
PLOD3-212ENST00000478082 PCP4L1A6NKN8 68 aa12.01□□□□□ -0.49
PLOD3-212ENST00000478082 MALP21145 153 aa12.01□□□□□ -0.49
PLOD3-212ENST00000478082 UBE2D1P51668 147 aa12.01□□□□□ -0.49
PLOD3-212ENST00000478082 SNRPEP62304 92 aaKnown RBP12.01□□□□□ -0.49
PLOD3-212ENST00000478082 SDIM1Q6ZPB5 146 aa12.01□□□□□ -0.49
PLOD3-212ENST00000478082 Q8N1X5 172 aa12.01□□□□□ -0.49
PLOD3-212ENST00000478082 A0A096LNJ9 63 aa12□□□□□ -0.49
PLOD3-212ENST00000478082 SCXQ7RTU7 201 aa12□□□□□ -0.49
PLOD3-212ENST00000478082 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12□□□□□ -0.49
PLOD3-212ENST00000478082 PMCHL1Q16048 86 aa11.99□□□□□ -0.49
PLOD3-212ENST00000478082 Q6ZN92 141 aa11.99□□□□□ -0.49
PLOD3-212ENST00000478082 SCGB3A1Q96QR1 104 aa11.99□□□□□ -0.49
PLOD3-212ENST00000478082 TIMM17AQ99595 171 aa11.99□□□□□ -0.49
PLOD3-212ENST00000478082 VCX2Q9H322 139 aa11.99□□□□□ -0.49
PLOD3-212ENST00000478082 PCLOQ9Y6V0 5065 aa11.98□□□□□ -0.49
PLOD3-212ENST00000478082 IGLV4-69A0A075B6H9 119 aa11.97□□□□□ -0.49
PLOD3-212ENST00000478082 LINC00614P0C842 121 aa11.97□□□□□ -0.49
PLOD3-212ENST00000478082 ERASQ7Z444 233 aa11.97□□□□□ -0.49
PLOD3-212ENST00000478082 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.96□□□□□ -0.49
PLOD3-212ENST00000478082 TRGC2P03986 189 aa11.96□□□□□ -0.49
PLOD3-212ENST00000478082 NPSP0C0P6 89 aa11.96□□□□□ -0.49
PLOD3-212ENST00000478082 CHTF8P0CG12 524 aa11.96□□□□□ -0.49
PLOD3-212ENST00000478082 CIRBP-AS1Q8TBR5 109 aa11.96□□□□□ -0.49
PLOD3-212ENST00000478082 C2orf88Q9BSF0 95 aa11.96□□□□□ -0.49
PLOD3-212ENST00000478082 CHAC1Q9BUX1 264 aa11.96□□□□□ -0.49
PLOD3-212ENST00000478082 IGHV3-64A0A075B6Q5 118 aa11.96□□□□□ -0.5
PLOD3-212ENST00000478082 ZNF561-AS1K7EIQ3 104 aa11.96□□□□□ -0.5
PLOD3-212ENST00000478082 G0S2P27469 103 aa11.96□□□□□ -0.5
PLOD3-212ENST00000478082 SPAG11BQ08648 103 aa11.94□□□□□ -0.5
PLOD3-212ENST00000478082 ORAOV1Q8WV07 137 aa11.94□□□□□ -0.5
PLOD3-212ENST00000478082 A0A087WZ39 114 aa11.93□□□□□ -0.5
PLOD3-212ENST00000478082 Q6ZRU5 148 aa11.93□□□□□ -0.5
PLOD3-212ENST00000478082 CARD19Q96LW7 228 aa11.93□□□□□ -0.5
PLOD3-212ENST00000478082 SYCNQ0VAF6 134 aa11.92□□□□□ -0.5
PLOD3-212ENST00000478082 A0A0J9YXV3 536 aa11.92□□□□□ -0.5
PLOD3-212ENST00000478082 APOMO95445 188 aa11.92□□□□□ -0.5
PLOD3-212ENST00000478082 Q5VSD8 79 aa11.92□□□□□ -0.5
PLOD3-212ENST00000478082 FAM19A3Q7Z5A8 133 aa11.92□□□□□ -0.5
PLOD3-212ENST00000478082 PAPPA-AS1Q5QFB9 102 aa11.91□□□□□ -0.5
PLOD3-212ENST00000478082 VPS13BQ7Z7G8 4022 aa11.9□□□□□ -0.5
PLOD3-212ENST00000478082 EPM2AB3EWF7 344 aa11.9□□□□□ -0.5
PLOD3-212ENST00000478082 HBDP02042 147 aa11.9□□□□□ -0.5
PLOD3-212ENST00000478082 OR10D4PQ8NGN7 298 aa11.9□□□□□ -0.5
PLOD3-212ENST00000478082 CAMK2N2Q96S95 79 aa11.9□□□□□ -0.5
PLOD3-212ENST00000478082 CST9LQ9H4G1 147 aa11.9□□□□□ -0.5
PLOD3-212ENST00000478082 CIRBPQ14011 172 aaKnown RBP11.89□□□□□ -0.51
PLOD3-212ENST00000478082 PDZD11Q5EBL8 140 aa11.89□□□□□ -0.51
PLOD3-212ENST00000478082 CDKN2A-AS1Q9UH64 79 aa11.89□□□□□ -0.51
PLOD3-212ENST00000478082 A0A096LNI7 61 aa11.88□□□□□ -0.51
PLOD3-212ENST00000478082 IGKV2-24A0A0C4DH68 120 aa11.88□□□□□ -0.51
PLOD3-212ENST00000478082 KIAA0087Q14695 138 aa11.88□□□□□ -0.51
PLOD3-212ENST00000478082 C10orf25Q5T742 122 aa11.88□□□□□ -0.51
PLOD3-212ENST00000478082 SPACA4Q8TDM5 124 aa11.88□□□□□ -0.51
PLOD3-212ENST00000478082 LINC01549A6NIU2 74 aa11.88□□□□□ -0.51
PLOD3-212ENST00000478082 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.88□□□□□ -0.51
PLOD3-212ENST00000478082 LINC00310P59036 64 aa11.88□□□□□ -0.51
PLOD3-212ENST00000478082 LINC00528Q8N1L1 170 aa11.88□□□□□ -0.51
PLOD3-212ENST00000478082 C2orf48Q96LS8 159 aa11.88□□□□□ -0.51
PLOD3-212ENST00000478082 S100A2P29034 98 aa11.87□□□□□ -0.51
PLOD3-212ENST00000478082 PMVKQ15126 192 aa11.87□□□□□ -0.51
PLOD3-212ENST00000478082 HERVK_113P63121 156 aa11.86□□□□□ -0.51
PLOD3-212ENST00000478082 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
PLOD3-212ENST00000478082 CHCHD1Q96BP2 118 aaKnown RBP11.86□□□□□ -0.51
PLOD3-212ENST00000478082 GEMIN7Q9H840 131 aaKnown RBP11.86□□□□□ -0.51
PLOD3-212ENST00000478082 A0A087WYN8 130 aa11.85□□□□□ -0.51
PLOD3-212ENST00000478082 NDUFA6P56556 154 aa11.85□□□□□ -0.51
PLOD3-212ENST00000478082 BAGE3Q86Y29 109 aa11.85□□□□□ -0.51
PLOD3-212ENST00000478082 FAM19A2Q8N3H0 131 aa11.85□□□□□ -0.51
PLOD3-212ENST00000478082 TINCRA0A1B0GVN0 87 aa11.84□□□□□ -0.51
PLOD3-212ENST00000478082 MAJINQ3KP22 176 aa11.84□□□□□ -0.51
PLOD3-212ENST00000478082 C2orf82Q6UX34 121 aa11.84□□□□□ -0.51
PLOD3-212ENST00000478082 LINC00587B1AMM8 73 aa11.84□□□□□ -0.51
PLOD3-212ENST00000478082 LINC01561Q8N1V8 128 aa11.84□□□□□ -0.51
PLOD3-212ENST00000478082 LINC00469Q8N7U9 141 aa11.84□□□□□ -0.51
PLOD3-212ENST00000478082 DPH3Q96FX2 82 aa11.84□□□□□ -0.51
PLOD3-212ENST00000478082 C6orf48Q9UBA6 75 aa11.84□□□□□ -0.51
PLOD3-212ENST00000478082 FAM229AH3BQW9 127 aa11.83□□□□□ -0.52
PLOD3-212ENST00000478082 NUPR1O60356 82 aa11.83□□□□□ -0.52
PLOD3-212ENST00000478082 SEC11AP67812 179 aa11.83□□□□□ -0.52
PLOD3-212ENST00000478082 TOMM7Q9P0U1 55 aa11.83□□□□□ -0.52
PLOD3-212ENST00000478082 IGLV5-45A0A087WSX0 123 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms