RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 WNK1Q9H4A3 2382 aa9.4□□□□□ -0.9
CCNL1-216ENST00000475298 COX7A2LO14548 114 aa9.39□□□□□ -0.91
CCNL1-216ENST00000475298 PROK1P58294 105 aa9.39□□□□□ -0.91
CCNL1-216ENST00000475298 MRPS36P82909 103 aaKnown RBP9.39□□□□□ -0.91
CCNL1-216ENST00000475298 NACAE9PAV3 2078 aa9.39□□□□□ -0.91
CCNL1-216ENST00000475298 NIPBLQ6KC79 2804 aaeCLIP9.39□□□□□ -0.91
CCNL1-216ENST00000475298 FLNAP21333 2647 aaKnown RBP9.39□□□□□ -0.91
CCNL1-216ENST00000475298 KRTAP1-3Q8IUG1 177 aa9.38□□□□□ -0.91
CCNL1-216ENST00000475298 VSIG2Q96IQ7 327 aa9.38□□□□□ -0.91
CCNL1-216ENST00000475298 TENM4Q6N022 2769 aa9.38□□□□□ -0.91
CCNL1-216ENST00000475298 TRAV13-1A0A0B4J241 112 aa9.38□□□□□ -0.91
CCNL1-216ENST00000475298 BAALC-AS2P0C853 105 aa9.37□□□□□ -0.91
CCNL1-216ENST00000475298 Q8N2B8 174 aa9.37□□□□□ -0.91
CCNL1-216ENST00000475298 SERP2Q8N6R1 65 aa9.37□□□□□ -0.91
CCNL1-216ENST00000475298 C11orf44Q8N8P7 122 aa9.37□□□□□ -0.91
CCNL1-216ENST00000475298 Q9UF83 564 aa9.37□□□□□ -0.91
CCNL1-216ENST00000475298 FASNP49327 2511 aaKnown RBP9.37□□□□□ -0.91
CCNL1-216ENST00000475298 TIMM17BO60830 172 aa9.36□□□□□ -0.91
CCNL1-216ENST00000475298 HIST2H2BCQ6DN03 193 aa9.36□□□□□ -0.91
CCNL1-216ENST00000475298 RS1O15537 224 aa9.36□□□□□ -0.91
CCNL1-216ENST00000475298 PYGO1Q9Y3Y4 419 aa9.36□□□□□ -0.91
CCNL1-216ENST00000475298 MRAPQ8TCY5 172 aa9.35□□□□□ -0.91
CCNL1-216ENST00000475298 C4orf3Q8WVX3 66 aa9.35□□□□□ -0.91
CCNL1-216ENST00000475298 FAM218AQ96MZ4 157 aa9.35□□□□□ -0.91
CCNL1-216ENST00000475298 MAP6D1Q9H9H5 199 aa9.35□□□□□ -0.91
CCNL1-216ENST00000475298 RNASE13Q5GAN3 156 aaKnown RBP9.34□□□□□ -0.91
CCNL1-216ENST00000475298 FAM222AQ5U5X8 452 aa9.34□□□□□ -0.91
CCNL1-216ENST00000475298 WFDC11Q8NEX6 87 aa9.34□□□□□ -0.91
CCNL1-216ENST00000475298 DYNLRB2Q8TF09 96 aa9.34□□□□□ -0.91
CCNL1-216ENST00000475298 A0A1W2PRX2 142 aa9.34□□□□□ -0.91
CCNL1-216ENST00000475298 ACANP16112 2415 aa9.33□□□□□ -0.92
CCNL1-216ENST00000475298 A0A087WVE0 104 aa9.33□□□□□ -0.92
CCNL1-216ENST00000475298 INAFM2P0DMQ5 153 aa9.33□□□□□ -0.92
CCNL1-216ENST00000475298 CD28P10747 220 aa9.33□□□□□ -0.92
CCNL1-216ENST00000475298 Q6ZSN1 163 aa9.33□□□□□ -0.92
CCNL1-216ENST00000475298 LINC01561Q8N1V8 128 aa9.33□□□□□ -0.92
CCNL1-216ENST00000475298 IGKV3D-7A0A0C4DH55 119 aa9.32□□□□□ -0.92
CCNL1-216ENST00000475298 LINC00308Q8TCZ7 52 aa9.32□□□□□ -0.92
CCNL1-216ENST00000475298 DEFB114Q30KQ6 69 aa9.32□□□□□ -0.92
CCNL1-216ENST00000475298 TINCRA0A1B0GVN0 87 aa9.31□□□□□ -0.92
CCNL1-216ENST00000475298 A8MTW9 85 aa9.31□□□□□ -0.92
CCNL1-216ENST00000475298 NOTCH3Q9UM47 2321 aa9.31□□□□□ -0.92
CCNL1-216ENST00000475298 SOSTDC1Q6X4U4 206 aa9.31□□□□□ -0.92
CCNL1-216ENST00000475298 MTORP42345 2549 aa9.31□□□□□ -0.92
CCNL1-216ENST00000475298 JMJD1CQ15652 2540 aa9.31□□□□□ -0.92
CCNL1-216ENST00000475298 DNAJC9-AS1A6NH13 148 aa9.3□□□□□ -0.92
CCNL1-216ENST00000475298 FHL2Q14192 279 aa9.3□□□□□ -0.92
CCNL1-216ENST00000475298 C9orf129Q5T035 196 aaKnown RBP9.3□□□□□ -0.92
CCNL1-216ENST00000475298 USP17L23D6RBM5 183 aa9.3□□□□□ -0.92
CCNL1-216ENST00000475298 Q6JHZ5 121 aa9.3□□□□□ -0.92
CCNL1-216ENST00000475298 SETXQ7Z333 2677 aaKnown RBP9.3□□□□□ -0.92
CCNL1-216ENST00000475298 NDUFA1O15239 70 aa9.29□□□□□ -0.92
CCNL1-216ENST00000475298 ESM1Q9NQ30 184 aa9.29□□□□□ -0.92
CCNL1-216ENST00000475298 XCL2Q9UBD3 114 aa9.29□□□□□ -0.92
CCNL1-216ENST00000475298 MALP21145 153 aa9.29□□□□□ -0.92
CCNL1-216ENST00000475298 ZNF415Q09FC8 603 aa9.29□□□□□ -0.92
CCNL1-216ENST00000475298 C11orf72Q8NBR9 251 aa9.29□□□□□ -0.92
CCNL1-216ENST00000475298 Q9HAA7 133 aa9.29□□□□□ -0.92
CCNL1-216ENST00000475298 LINC00846Q9NV44 126 aa9.29□□□□□ -0.92
CCNL1-216ENST00000475298 IGHV3OR16-12A0A075B7B8 117 aa9.28□□□□□ -0.92
CCNL1-216ENST00000475298 IGHV3-38A0A0C4DH36 116 aa9.28□□□□□ -0.92
CCNL1-216ENST00000475298 ODF3L2Q3SX64 289 aa9.28□□□□□ -0.92
CCNL1-216ENST00000475298 PRIMA1Q86XR5 153 aa9.28□□□□□ -0.92
CCNL1-216ENST00000475298 ITPR2Q14571 2701 aa9.28□□□□□ -0.92
CCNL1-216ENST00000475298 PDZD2O15018 2839 aa9.27□□□□□ -0.93
CCNL1-216ENST00000475298 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.27□□□□□ -0.93
CCNL1-216ENST00000475298 CDKN2A-AS1Q9UH64 79 aa9.27□□□□□ -0.93
CCNL1-216ENST00000475298 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.26□□□□□ -0.93
CCNL1-216ENST00000475298 A0A0U1RRA0 63 aa9.26□□□□□ -0.93
CCNL1-216ENST00000475298 IGKV2-29A2NJV5 120 aaPredicted RBP9.26□□□□□ -0.93
CCNL1-216ENST00000475298 INSP01308 110 aa9.26□□□□□ -0.93
CCNL1-216ENST00000475298 DNAL4O96015 105 aa9.26□□□□□ -0.93
CCNL1-216ENST00000475298 LINC00336Q6ZUF6 198 aa9.26□□□□□ -0.93
CCNL1-216ENST00000475298 C14orf132Q9NPU4 83 aa9.26□□□□□ -0.93
CCNL1-216ENST00000475298 PFN2P35080 140 aa9.25□□□□□ -0.93
CCNL1-216ENST00000475298 CIRBPQ14011 172 aaKnown RBP9.25□□□□□ -0.93
CCNL1-216ENST00000475298 ZNF625Q96I27 306 aaPredicted RBP9.25□□□□□ -0.93
CCNL1-216ENST00000475298 CHCHD7Q9BUK0 85 aa9.25□□□□□ -0.93
CCNL1-216ENST00000475298 Q9H8V8 135 aa9.24□□□□□ -0.93
CCNL1-216ENST00000475298 PRO0628Q9UI54 55 aa9.24□□□□□ -0.93
CCNL1-216ENST00000475298 UBE2D4Q9Y2X8 147 aa9.24□□□□□ -0.93
CCNL1-216ENST00000475298 EPM2AB3EWF7 344 aa9.24□□□□□ -0.93
CCNL1-216ENST00000475298 CCL24O00175 119 aa9.24□□□□□ -0.93
CCNL1-216ENST00000475298 TMEM86BQ8N661 226 aa9.24□□□□□ -0.93
CCNL1-216ENST00000475298 OBSCN-AS1Q96MR7 158 aa9.24□□□□□ -0.93
CCNL1-216ENST00000475298 STHQ8IWL8 128 aa9.23□□□□□ -0.93
CCNL1-216ENST00000475298 C1orf158Q8N1D5 194 aa9.23□□□□□ -0.93
CCNL1-216ENST00000475298 LINC00467Q9BRT7 94 aa9.23□□□□□ -0.93
CCNL1-216ENST00000475298 IGLV5-45A0A087WSX0 123 aa9.23□□□□□ -0.93
CCNL1-216ENST00000475298 NDUFC2-KCTD14E9PQ53 114 aa9.22□□□□□ -0.93
CCNL1-216ENST00000475298 C2CD3Q4AC94 2353 aa9.22□□□□□ -0.93
CCNL1-216ENST00000475298 GCN1Q92616 2671 aaKnown RBP9.22□□□□□ -0.93
CCNL1-216ENST00000475298 IGHV3-53P01767 116 aa9.22□□□□□ -0.93
CCNL1-216ENST00000475298 COX6A2Q02221 97 aa9.22□□□□□ -0.93
CCNL1-216ENST00000475298 NDUFC2O95298 119 aa9.21□□□□□ -0.93
CCNL1-216ENST00000475298 WFDC10AQ9H1F0 79 aa9.21□□□□□ -0.93
CCNL1-216ENST00000475298 ANK3Q12955 4377 aaKnown RBP9.21□□□□□ -0.93
CCNL1-216ENST00000475298 TRGV1A0A0A0MS02 117 aa9.21□□□□□ -0.94
CCNL1-216ENST00000475298 IGLV5-39A0A0G2JS06 123 aa9.21□□□□□ -0.94
CCNL1-216ENST00000475298 HILS1P60008 231 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms