RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 IFITM1P13164 125 aa15.2■□□□□ 0.02
CCM2-206ENST00000474617 SMIM1B2RUZ4 78 aa15.19■□□□□ 0.02
CCM2-206ENST00000474617 HERV-K104P63124 156 aa15.19■□□□□ 0.02
CCM2-206ENST00000474617 SFTA2Q6UW10 78 aa15.19■□□□□ 0.02
CCM2-206ENST00000474617 COX6A2Q02221 97 aa15.18■□□□□ 0.02
CCM2-206ENST00000474617 MRPL23Q16540 153 aaKnown RBP15.18■□□□□ 0.02
CCM2-206ENST00000474617 OXLD1Q5BKU9 147 aa15.18■□□□□ 0.02
CCM2-206ENST00000474617 PPDPFQ9H3Y8 114 aa15.17■□□□□ 0.02
CCM2-206ENST00000474617 A0A0B4J2C4 111 aa15.17■□□□□ 0.02
CCM2-206ENST00000474617 F5H768 121 aa15.17■□□□□ 0.02
CCM2-206ENST00000474617 MIAQ16674 131 aa15.17■□□□□ 0.02
CCM2-206ENST00000474617 KRTAP10-11P60412 298 aa15.16■□□□□ 0.02
CCM2-206ENST00000474617 LINC01561Q8N1V8 128 aa15.16■□□□□ 0.02
CCM2-206ENST00000474617 LITAFQ99732 161 aa15.16■□□□□ 0.02
CCM2-206ENST00000474617 C11orf68Q9H3H3 251 aaKnown RBP15.16■□□□□ 0.02
CCM2-206ENST00000474617 H3BNG1 76 aa15.15■□□□□ 0.02
CCM2-206ENST00000474617 ICOSQ9Y6W8 199 aa15.14■□□□□ 0.01
CCM2-206ENST00000474617 PGPEP1Q9NXJ5 209 aa15.13■□□□□ 0.01
CCM2-206ENST00000474617 PRO1854Q9UHT4 67 aa15.13■□□□□ 0.01
CCM2-206ENST00000474617 CELA1Q9UNI1 258 aa15.13■□□□□ 0.01
CCM2-206ENST00000474617 IGLV4-60A0A075B6I1 120 aa15.12■□□□□ 0.01
CCM2-206ENST00000474617 DEFB4AO15263 64 aa15.12■□□□□ 0.01
CCM2-206ENST00000474617 CFC1BP0CG36 223 aa15.12■□□□□ 0.01
CCM2-206ENST00000474617 CFC1P0CG37 223 aa15.12■□□□□ 0.01
CCM2-206ENST00000474617 SS18Q15532 418 aa15.12■□□□□ 0.01
CCM2-206ENST00000474617 PRIMA1Q86XR5 153 aa15.12■□□□□ 0.01
CCM2-206ENST00000474617 MUSTN1Q8IVN3 82 aa15.12■□□□□ 0.01
CCM2-206ENST00000474617 RBX1P62877 108 aa15.12■□□□□ 0.01
CCM2-206ENST00000474617 A0A087WZ39 114 aa15.11■□□□□ 0.01
CCM2-206ENST00000474617 IGHV3OR16-9A0A0B4J2B5 98 aa15.11■□□□□ 0.01
CCM2-206ENST00000474617 A4D1N5 150 aa15.11■□□□□ 0.01
CCM2-206ENST00000474617 TMEM262E9PQX1 116 aa15.11■□□□□ 0.01
CCM2-206ENST00000474617 APOMO95445 188 aa15.1■□□□□ 0.01
CCM2-206ENST00000474617 ZNF625Q96I27 306 aaPredicted RBP15.1■□□□□ 0.01
CCM2-206ENST00000474617 NAA38Q9BRA0 125 aaKnown RBP15.1■□□□□ 0.01
CCM2-206ENST00000474617 Q9H8V8 135 aa15.1■□□□□ 0.01
CCM2-206ENST00000474617 LINC00959A0A1B0GUT2 108 aa15.09■□□□□ 0.01
CCM2-206ENST00000474617 LELP1Q5T871 98 aa15.09■□□□□ 0.01
CCM2-206ENST00000474617 TSPAN13O95857 204 aa15.07■□□□□ 0
CCM2-206ENST00000474617 PRSS2P07478 247 aa15.07■□□□□ 0
CCM2-206ENST00000474617 TRBV20-1A0A075B6N2 111 aa15.07■□□□□ 0
CCM2-206ENST00000474617 COX7B2Q8TF08 81 aa15.07■□□□□ 0
CCM2-206ENST00000474617 TRRAPQ9Y4A5 3859 aa15.06■□□□□ 0
CCM2-206ENST00000474617 F8W1H4 67 aa15.05■□□□□ -0
CCM2-206ENST00000474617 ADAMTSL4-AS1Q5T5F5 129 aa15.04■□□□□ -0
CCM2-206ENST00000474617 ERG28Q9UKR5 140 aa15.04■□□□□ -0
CCM2-206ENST00000474617 NBEAL2Q6ZNJ1 2754 aa15.04■□□□□ -0
CCM2-206ENST00000474617 IGHV3-33P01772 117 aa15.02■□□□□ -0
CCM2-206ENST00000474617 MEIG1Q5JSS6 88 aa15.02□□□□□ -0.01
CCM2-206ENST00000474617 A0A096LPF7 62 aa15.01□□□□□ -0.01
CCM2-206ENST00000474617 IGKV3OR2-268A0A0C4DH90 116 aa15.01□□□□□ -0.01
CCM2-206ENST00000474617 HTN3P15516 51 aa15.01□□□□□ -0.01
CCM2-206ENST00000474617 CD164L2Q6UWJ8 174 aa15□□□□□ -0.01
CCM2-206ENST00000474617 LINC00308Q8TCZ7 52 aa14.99□□□□□ -0.01
CCM2-206ENST00000474617 G3V4G9 280 aa14.98□□□□□ -0.01
CCM2-206ENST00000474617 Q8IZM0 81 aa14.98□□□□□ -0.01
CCM2-206ENST00000474617 MAST4O15021 2626 aa14.98□□□□□ -0.01
CCM2-206ENST00000474617 LOC107984156A0A0G2JMH3 177 aa14.97□□□□□ -0.01
CCM2-206ENST00000474617 IBA57-AS1B1ANH7 110 aa14.97□□□□□ -0.01
CCM2-206ENST00000474617 ARL17AQ8IVW1 177 aa14.97□□□□□ -0.01
CCM2-206ENST00000474617 K7ERU9 68 aa14.97□□□□□ -0.01
CCM2-206ENST00000474617 ANGP03950 147 aaKnown RBP14.97□□□□□ -0.01
CCM2-206ENST00000474617 CXCL5P42830 114 aa14.97□□□□□ -0.01
CCM2-206ENST00000474617 REG3AQ06141 175 aa14.97□□□□□ -0.01
CCM2-206ENST00000474617 TRBV30A0A0K0K1B3 111 aa14.96□□□□□ -0.02
CCM2-206ENST00000474617 LINC00269Q8N2A0 174 aa14.96□□□□□ -0.02
CCM2-206ENST00000474617 STAB1Q9NY15 2570 aa14.96□□□□□ -0.02
CCM2-206ENST00000474617 FBN1P35555 2871 aaKnown RBP14.95□□□□□ -0.02
CCM2-206ENST00000474617 SPATA25Q9BR10 227 aa14.95□□□□□ -0.02
CCM2-206ENST00000474617 COX7A2LO14548 114 aa14.94□□□□□ -0.02
CCM2-206ENST00000474617 SCGB1C2P0DMR2 95 aa14.94□□□□□ -0.02
CCM2-206ENST00000474617 XCL1P47992 114 aa14.94□□□□□ -0.02
CCM2-206ENST00000474617 PSMB2P49721 201 aa14.94□□□□□ -0.02
CCM2-206ENST00000474617 LYPD5Q6UWN5 251 aa14.94□□□□□ -0.02
CCM2-206ENST00000474617 C5orf38Q86SI9 138 aa14.94□□□□□ -0.02
CCM2-206ENST00000474617 H3BMG7 143 aa14.93□□□□□ -0.02
CCM2-206ENST00000474617 COX6CP09669 75 aa14.93□□□□□ -0.02
CCM2-206ENST00000474617 OCIAD2Q56VL3 154 aa14.93□□□□□ -0.02
CCM2-206ENST00000474617 RETNQ9HD89 108 aa14.93□□□□□ -0.02
CCM2-206ENST00000474617 TOMM7Q9P0U1 55 aa14.93□□□□□ -0.02
CCM2-206ENST00000474617 Q1RN00 199 aa14.92□□□□□ -0.02
CCM2-206ENST00000474617 C6orf226Q5I0X4 101 aa14.92□□□□□ -0.02
CCM2-206ENST00000474617 PRR34Q9NV39 138 aa14.92□□□□□ -0.02
CCM2-206ENST00000474617 EIF4EBP3O60516 100 aaPredicted RBP14.92□□□□□ -0.02
CCM2-206ENST00000474617 KPRPQ5T749 579 aaPredicted RBP14.92□□□□□ -0.02
CCM2-206ENST00000474617 CHCHD10Q8WYQ3 142 aaPredicted RBP14.92□□□□□ -0.02
CCM2-206ENST00000474617 TRAV8-4A0A0B4J246 113 aa14.91□□□□□ -0.02
CCM2-206ENST00000474617 C11orf45Q8TAV5 145 aa14.91□□□□□ -0.02
CCM2-206ENST00000474617 Q6ZTC4 211 aa14.9□□□□□ -0.02
CCM2-206ENST00000474617 DNAH3Q8TD57 4116 aa14.9□□□□□ -0.02
CCM2-206ENST00000474617 MUC7Q8TAX7 377 aa14.89□□□□□ -0.03
CCM2-206ENST00000474617 A0A0J9YWU9 116 aa14.88□□□□□ -0.03
CCM2-206ENST00000474617 CMYA5Q8N3K9 4069 aa14.88□□□□□ -0.03
CCM2-206ENST00000474617 M0QXV9 152 aa14.87□□□□□ -0.03
CCM2-206ENST00000474617 MALP21145 153 aa14.87□□□□□ -0.03
CCM2-206ENST00000474617 COX17Q14061 63 aa14.87□□□□□ -0.03
CCM2-206ENST00000474617 TM2D3Q9BRN9 247 aa14.87□□□□□ -0.03
CCM2-206ENST00000474617 PRO0461Q9UI25 63 aa14.87□□□□□ -0.03
CCM2-206ENST00000474617 ATXN8Q156A1 80 aa14.87□□□□□ -0.03
CCM2-206ENST00000474617 CFAP161Q6P656 301 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms