RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 A0A087WX48 190 aa4.57□□□□□ -1.68
VAMP3-202ENST00000470357 A0A1B0GUV1 79 aa4.57□□□□□ -1.68
VAMP3-202ENST00000470357 IGKV2-29A2NJV5 120 aaPredicted RBP4.57□□□□□ -1.68
VAMP3-202ENST00000470357 PLNP26678 52 aa4.57□□□□□ -1.68
VAMP3-202ENST00000470357 CCL18P55774 89 aa4.57□□□□□ -1.68
VAMP3-202ENST00000470357 SEC11AP67812 179 aa4.57□□□□□ -1.68
VAMP3-202ENST00000470357 S100A12P80511 92 aa4.57□□□□□ -1.68
VAMP3-202ENST00000470357 LINC01545Q5VT33 79 aa4.57□□□□□ -1.68
VAMP3-202ENST00000470357 TEX43Q6ZNM6 134 aa4.57□□□□□ -1.68
VAMP3-202ENST00000470357 LINC00173Q6ZV60 143 aa4.57□□□□□ -1.68
VAMP3-202ENST00000470357 IGLV4-3A0A075B6K6 122 aa4.56□□□□□ -1.68
VAMP3-202ENST00000470357 IGLL5B9A064 214 aa4.56□□□□□ -1.68
VAMP3-202ENST00000470357 HSBP1L1C9JCN9 74 aa4.56□□□□□ -1.68
VAMP3-202ENST00000470357 TMEM262E9PQX1 116 aa4.56□□□□□ -1.68
VAMP3-202ENST00000470357 F8VRH5 84 aa4.56□□□□□ -1.68
VAMP3-202ENST00000470357 H0Y8G0 127 aa4.56□□□□□ -1.68
VAMP3-202ENST00000470357 CCL25O15444 150 aa4.56□□□□□ -1.68
VAMP3-202ENST00000470357 DPM2O94777 84 aa4.56□□□□□ -1.68
VAMP3-202ENST00000470357 PYY3Q5JQD4 70 aa4.56□□□□□ -1.68
VAMP3-202ENST00000470357 CEMP1Q6PRD7 247 aaPredicted RBP4.56□□□□□ -1.68
VAMP3-202ENST00000470357 LYPD5Q6UWN5 251 aa4.56□□□□□ -1.68
VAMP3-202ENST00000470357 DEFB104AQ8WTQ1 72 aa4.56□□□□□ -1.68
VAMP3-202ENST00000470357 BAALCQ8WXS3 180 aa4.56□□□□□ -1.68
VAMP3-202ENST00000470357 CST9LQ9H4G1 147 aa4.56□□□□□ -1.68
VAMP3-202ENST00000470357 CHTOPQ9Y3Y2 248 aaKnown RBP4.56□□□□□ -1.68
VAMP3-202ENST00000470357 DYNC1H1Q14204 4646 aaKnown RBP4.55□□□□□ -1.68
VAMP3-202ENST00000470357 DNAH11Q96DT5 4516 aa4.55□□□□□ -1.68
VAMP3-202ENST00000470357 GAGE6Q13070 117 aa4.55□□□□□ -1.68
VAMP3-202ENST00000470357 ZNF664Q8N3J9 261 aa4.55□□□□□ -1.68
VAMP3-202ENST00000470357 AMELXQ99217 191 aa4.55□□□□□ -1.68
VAMP3-202ENST00000470357 CDC42SE2Q9NRR3 84 aa4.55□□□□□ -1.68
VAMP3-202ENST00000470357 DNAH2Q9P225 4427 aa4.55□□□□□ -1.68
VAMP3-202ENST00000470357 FAT2Q9NYQ8 4349 aa4.55□□□□□ -1.68
VAMP3-202ENST00000470357 DNAH17Q9UFH2 4485 aa4.54□□□□□ -1.68
VAMP3-202ENST00000470357 GAGE10A6NGK3 116 aa4.54□□□□□ -1.68
VAMP3-202ENST00000470357 K7EP13 123 aa4.54□□□□□ -1.68
VAMP3-202ENST00000470357 IGKCP01834 107 aa4.54□□□□□ -1.68
VAMP3-202ENST00000470357 RBX1P62877 108 aa4.54□□□□□ -1.68
VAMP3-202ENST00000470357 Q6ZUT4 128 aa4.54□□□□□ -1.68
VAMP3-202ENST00000470357 C12orf57Q99622 126 aa4.54□□□□□ -1.68
VAMP3-202ENST00000470357 VAMP8Q9BV40 100 aa4.54□□□□□ -1.68
VAMP3-202ENST00000470357 MRPS16Q9Y3D3 137 aaKnown RBP4.54□□□□□ -1.68
VAMP3-202ENST00000470357 TRAV9-2A0A087WT02 112 aa4.53□□□□□ -1.68
VAMP3-202ENST00000470357 TINCRA0A1B0GVN0 87 aa4.53□□□□□ -1.68
VAMP3-202ENST00000470357 IGLC3P0DOY3 106 aa4.53□□□□□ -1.68
VAMP3-202ENST00000470357 HERVK_113P61574 105 aa4.53□□□□□ -1.68
VAMP3-202ENST00000470357 HERVK_113P63121 156 aa4.53□□□□□ -1.68
VAMP3-202ENST00000470357 SS18Q15532 418 aa4.53□□□□□ -1.68
VAMP3-202ENST00000470357 ESRGQ1W209 222 aa4.53□□□□□ -1.68
VAMP3-202ENST00000470357 NFE4Q86UQ8 179 aa4.53□□□□□ -1.68
VAMP3-202ENST00000470357 LINC00518Q8N0U6 118 aa4.53□□□□□ -1.68
VAMP3-202ENST00000470357 Q8N976 141 aa4.53□□□□□ -1.68
VAMP3-202ENST00000470357 UPK3BQ9BT76 320 aa4.53□□□□□ -1.68
VAMP3-202ENST00000470357 GEMIN7Q9H840 131 aaKnown RBP4.53□□□□□ -1.68
VAMP3-202ENST00000470357 MRPL35Q9NZE8 188 aaKnown RBP4.53□□□□□ -1.68
VAMP3-202ENST00000470357 H3BRM9 83 aa4.52□□□□□ -1.69
VAMP3-202ENST00000470357 SIVA1O15304 175 aa4.52□□□□□ -1.69
VAMP3-202ENST00000470357 CRPP02741 224 aa4.52□□□□□ -1.69
VAMP3-202ENST00000470357 ANGP03950 147 aaKnown RBP4.52□□□□□ -1.69
VAMP3-202ENST00000470357 UBE2D1P51668 147 aa4.52□□□□□ -1.69
VAMP3-202ENST00000470357 MPV17L2Q567V2 206 aa4.52□□□□□ -1.69
VAMP3-202ENST00000470357 LINC01556Q5JQF7 62 aa4.52□□□□□ -1.69
VAMP3-202ENST00000470357 FAM19A3Q7Z5A8 133 aa4.52□□□□□ -1.69
VAMP3-202ENST00000470357 C10orf126Q8N4M7 172 aa4.52□□□□□ -1.69
VAMP3-202ENST00000470357 OPRPNQ99935 248 aaPredicted RBP4.52□□□□□ -1.69
VAMP3-202ENST00000470357 CHAC1Q9BUX1 264 aa4.52□□□□□ -1.69
VAMP3-202ENST00000470357 PKHD1P08F94 4074 aa4.51□□□□□ -1.69
VAMP3-202ENST00000470357 IGLV4-69A0A075B6H9 119 aa4.51□□□□□ -1.69
VAMP3-202ENST00000470357 IGLV4-60A0A075B6I1 120 aa4.51□□□□□ -1.69
VAMP3-202ENST00000470357 TRAV13-1A0A0B4J241 112 aa4.51□□□□□ -1.69
VAMP3-202ENST00000470357 TRAV8-4A0A0B4J246 113 aa4.51□□□□□ -1.69
VAMP3-202ENST00000470357 C11orf86A6NJI1 115 aa4.51□□□□□ -1.69
VAMP3-202ENST00000470357 DNAH10OSP0CZ25 163 aa4.51□□□□□ -1.69
VAMP3-202ENST00000470357 MIAQ16674 131 aa4.51□□□□□ -1.69
VAMP3-202ENST00000470357 UBE2DNLQ8IWF7 75 aa4.51□□□□□ -1.69
VAMP3-202ENST00000470357 FAM104AQ969W3 186 aa4.51□□□□□ -1.69
VAMP3-202ENST00000470357 PMCHL2Q9BQD1 86 aa4.51□□□□□ -1.69
VAMP3-202ENST00000470357 APLNQ9ULZ1 77 aa4.51□□□□□ -1.69
VAMP3-202ENST00000470357 IGLV5-45A0A087WSX0 123 aa4.5□□□□□ -1.69
VAMP3-202ENST00000470357 A0A0J9YXV3 536 aa4.5□□□□□ -1.69
VAMP3-202ENST00000470357 LINC00959A0A1B0GUT2 108 aa4.5□□□□□ -1.69
VAMP3-202ENST00000470357 TSTD3H0UI37 97 aa4.5□□□□□ -1.69
VAMP3-202ENST00000470357 REG3AQ06141 175 aa4.5□□□□□ -1.69
VAMP3-202ENST00000470357 RNASE13Q5GAN3 156 aaKnown RBP4.5□□□□□ -1.69
VAMP3-202ENST00000470357 TMEM170BQ5T4T1 132 aa4.5□□□□□ -1.69
VAMP3-202ENST00000470357 ZC2HC1BQ5TFG8 222 aa4.5□□□□□ -1.69
VAMP3-202ENST00000470357 WFDC10BQ8IUB3 73 aa4.5□□□□□ -1.69
VAMP3-202ENST00000470357 ATOH7Q8N100 152 aa4.5□□□□□ -1.69
VAMP3-202ENST00000470357 LINC00269Q8N2A0 174 aa4.5□□□□□ -1.69
VAMP3-202ENST00000470357 PRR34Q9NV39 138 aa4.5□□□□□ -1.69
VAMP3-202ENST00000470357 LINC00588Q9Y4M8 146 aa4.5□□□□□ -1.69
VAMP3-202ENST00000470357 DNAH6Q9C0G6 4158 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 HERC1Q15751 4861 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 TRAV8-3A0A0A6YYJ7 113 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 E9PLD3 99 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 IGHV3-30P01768 117 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 IGHV3-33P01772 117 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 IGHV3-30-3P0DP02 117 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 IGHV3-30-5P0DP03 117 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 ZNF22P17026 224 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms