RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 LINC00242Q5T6M2 205 aa5.34□□□□□ -1.55
TRAPPC3-206ENST00000469757 Q6ZN92 141 aa5.34□□□□□ -1.55
TRAPPC3-206ENST00000469757 TEX43Q6ZNM6 134 aa5.34□□□□□ -1.55
TRAPPC3-206ENST00000469757 FA2HQ7L5A8 372 aa5.34□□□□□ -1.55
TRAPPC3-206ENST00000469757 OR10D4PQ8NGN7 298 aa5.34□□□□□ -1.55
TRAPPC3-206ENST00000469757 PRSS3P2Q8NHM4 247 aa5.34□□□□□ -1.55
TRAPPC3-206ENST00000469757 C2orf88Q9BSF0 95 aa5.34□□□□□ -1.55
TRAPPC3-206ENST00000469757 DNAH8Q96JB1 4490 aa5.33□□□□□ -1.56
TRAPPC3-206ENST00000469757 IGHV3-64A0A075B6Q5 118 aa5.33□□□□□ -1.56
TRAPPC3-206ENST00000469757 A0A087WZ39 114 aa5.33□□□□□ -1.56
TRAPPC3-206ENST00000469757 HIGD2BQ4VC39 106 aa5.33□□□□□ -1.56
TRAPPC3-206ENST00000469757 SDIM1Q6ZPB5 146 aa5.33□□□□□ -1.56
TRAPPC3-206ENST00000469757 SCXQ7RTU7 201 aa5.33□□□□□ -1.56
TRAPPC3-206ENST00000469757 LINC01561Q8N1V8 128 aa5.33□□□□□ -1.56
TRAPPC3-206ENST00000469757 CHAC1Q9BUX1 264 aa5.33□□□□□ -1.56
TRAPPC3-206ENST00000469757 IGLV5-45A0A087WSX0 123 aa5.32□□□□□ -1.56
TRAPPC3-206ENST00000469757 F8WDY8 70 aa5.32□□□□□ -1.56
TRAPPC3-206ENST00000469757 APOMO95445 188 aa5.32□□□□□ -1.56
TRAPPC3-206ENST00000469757 C2orf48Q96LS8 159 aa5.32□□□□□ -1.56
TRAPPC3-206ENST00000469757 PKIGQ9Y2B9 76 aa5.32□□□□□ -1.56
TRAPPC3-206ENST00000469757 COLCA2A8K830 154 aa5.31□□□□□ -1.56
TRAPPC3-206ENST00000469757 HBDP02042 147 aa5.31□□□□□ -1.56
TRAPPC3-206ENST00000469757 LINC00614P0C842 121 aa5.31□□□□□ -1.56
TRAPPC3-206ENST00000469757 MALP21145 153 aa5.31□□□□□ -1.56
TRAPPC3-206ENST00000469757 RAB5BP61020 215 aa5.31□□□□□ -1.56
TRAPPC3-206ENST00000469757 SEC11AP67812 179 aa5.31□□□□□ -1.56
TRAPPC3-206ENST00000469757 SPAG11BQ08648 103 aa5.31□□□□□ -1.56
TRAPPC3-206ENST00000469757 PDZD11Q5EBL8 140 aa5.31□□□□□ -1.56
TRAPPC3-206ENST00000469757 C5orf38Q86SI9 138 aa5.31□□□□□ -1.56
TRAPPC3-206ENST00000469757 SPACA4Q8TDM5 124 aa5.31□□□□□ -1.56
TRAPPC3-206ENST00000469757 CHCHD1Q96BP2 118 aaKnown RBP5.31□□□□□ -1.56
TRAPPC3-206ENST00000469757 CARD19Q96LW7 228 aa5.31□□□□□ -1.56
TRAPPC3-206ENST00000469757 SCGB3A1Q96QR1 104 aa5.31□□□□□ -1.56
TRAPPC3-206ENST00000469757 VCX2Q9H322 139 aa5.31□□□□□ -1.56
TRAPPC3-206ENST00000469757 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC3-206ENST00000469757 IGLV4-69A0A075B6H9 119 aa5.3□□□□□ -1.56
TRAPPC3-206ENST00000469757 PANO1I0J062 215 aa5.3□□□□□ -1.56
TRAPPC3-206ENST00000469757 ZNF561-AS1K7EIQ3 104 aa5.3□□□□□ -1.56
TRAPPC3-206ENST00000469757 HERVK_113P63121 156 aa5.3□□□□□ -1.56
TRAPPC3-206ENST00000469757 HAMPP81172 84 aa5.3□□□□□ -1.56
TRAPPC3-206ENST00000469757 COX6A2Q02221 97 aa5.3□□□□□ -1.56
TRAPPC3-206ENST00000469757 SYCNQ0VAF6 134 aa5.3□□□□□ -1.56
TRAPPC3-206ENST00000469757 ZC2HC1BQ5TFG8 222 aa5.3□□□□□ -1.56
TRAPPC3-206ENST00000469757 CIRBP-AS1Q8TBR5 109 aa5.3□□□□□ -1.56
TRAPPC3-206ENST00000469757 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
TRAPPC3-206ENST00000469757 VPS13BQ7Z7G8 4022 aa5.3□□□□□ -1.56
TRAPPC3-206ENST00000469757 TINCRA0A1B0GVN0 87 aa5.29□□□□□ -1.56
TRAPPC3-206ENST00000469757 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC3-206ENST00000469757 TRGC2P03986 189 aa5.29□□□□□ -1.56
TRAPPC3-206ENST00000469757 KIAA0087Q14695 138 aa5.29□□□□□ -1.56
TRAPPC3-206ENST00000469757 RNF151Q2KHN1 245 aa5.29□□□□□ -1.56
TRAPPC3-206ENST00000469757 ORAOV1Q8WV07 137 aa5.29□□□□□ -1.56
TRAPPC3-206ENST00000469757 CST9LQ9H4G1 147 aa5.29□□□□□ -1.56
TRAPPC3-206ENST00000469757 MRPL35Q9NZE8 188 aaKnown RBP5.29□□□□□ -1.56
TRAPPC3-206ENST00000469757 SRRM2Q9UQ35 2752 aaKnown RBP5.28□□□□□ -1.56
TRAPPC3-206ENST00000469757 EPM2AB3EWF7 344 aa5.28□□□□□ -1.56
TRAPPC3-206ENST00000469757 IGLC3P0DOY3 106 aa5.28□□□□□ -1.56
TRAPPC3-206ENST00000469757 LINC00310P59036 64 aa5.28□□□□□ -1.56
TRAPPC3-206ENST00000469757 PMVKQ15126 192 aa5.28□□□□□ -1.56
TRAPPC3-206ENST00000469757 Q5VSD8 79 aa5.28□□□□□ -1.56
TRAPPC3-206ENST00000469757 Q6ZRU5 148 aa5.28□□□□□ -1.56
TRAPPC3-206ENST00000469757 LINC00526Q96FQ7 95 aa5.28□□□□□ -1.56
TRAPPC3-206ENST00000469757 PLAC8Q9NZF1 115 aa5.28□□□□□ -1.56
TRAPPC3-206ENST00000469757 A0A096LNI7 61 aa5.27□□□□□ -1.57
TRAPPC3-206ENST00000469757 A0A0J9YXV3 536 aa5.27□□□□□ -1.57
TRAPPC3-206ENST00000469757 SMIM1B2RUZ4 78 aa5.27□□□□□ -1.57
TRAPPC3-206ENST00000469757 ATP5LO75964 103 aa5.27□□□□□ -1.57
TRAPPC3-206ENST00000469757 CHTF8P0CG12 524 aa5.27□□□□□ -1.57
TRAPPC3-206ENST00000469757 KRTAP10-4P60372 401 aaPredicted RBP5.27□□□□□ -1.57
TRAPPC3-206ENST00000469757 PMCHL1Q16048 86 aa5.27□□□□□ -1.57
TRAPPC3-206ENST00000469757 Q8IZM0 81 aa5.27□□□□□ -1.57
TRAPPC3-206ENST00000469757 LINC00528Q8N1L1 170 aa5.27□□□□□ -1.57
TRAPPC3-206ENST00000469757 CAMK2N2Q96S95 79 aa5.27□□□□□ -1.57
TRAPPC3-206ENST00000469757 GEMIN7Q9H840 131 aaKnown RBP5.27□□□□□ -1.57
TRAPPC3-206ENST00000469757 LINC00474Q9P2X8 69 aa5.27□□□□□ -1.57
TRAPPC3-206ENST00000469757 CDKN2A-AS1Q9UH64 79 aa5.27□□□□□ -1.57
TRAPPC3-206ENST00000469757 LOC107984640A0A0U1RRK4 108 aa5.26□□□□□ -1.57
TRAPPC3-206ENST00000469757 NDUFA1O15239 70 aa5.26□□□□□ -1.57
TRAPPC3-206ENST00000469757 SCO1O75880 301 aa5.26□□□□□ -1.57
TRAPPC3-206ENST00000469757 TLX1NBP0CAT3 122 aa5.26□□□□□ -1.57
TRAPPC3-206ENST00000469757 PTTG1IPP53801 180 aa5.26□□□□□ -1.57
TRAPPC3-206ENST00000469757 PCLOQ9Y6V0 5065 aa5.26□□□□□ -1.57
TRAPPC3-206ENST00000469757 ABCA13Q86UQ4 5058 aa5.25□□□□□ -1.57
TRAPPC3-206ENST00000469757 A0A087WYN8 130 aa5.25□□□□□ -1.57
TRAPPC3-206ENST00000469757 TRAV12-1A0A0B4J245 112 aa5.25□□□□□ -1.57
TRAPPC3-206ENST00000469757 IGLV5-39A0A0G2JS06 123 aa5.25□□□□□ -1.57
TRAPPC3-206ENST00000469757 TRBV30A0A0K0K1B3 111 aa5.25□□□□□ -1.57
TRAPPC3-206ENST00000469757 SERF1AO75920 110 aa5.25□□□□□ -1.57
TRAPPC3-206ENST00000469757 CXCL5P42830 114 aa5.25□□□□□ -1.57
TRAPPC3-206ENST00000469757 C10orf25Q5T742 122 aa5.25□□□□□ -1.57
TRAPPC3-206ENST00000469757 LINC00469Q8N7U9 141 aa5.25□□□□□ -1.57
TRAPPC3-206ENST00000469757 C6orf48Q9UBA6 75 aa5.25□□□□□ -1.57
TRAPPC3-206ENST00000469757 FAT1Q14517 4588 aa5.25□□□□□ -1.57
TRAPPC3-206ENST00000469757 FAM229AH3BQW9 127 aa5.24□□□□□ -1.57
TRAPPC3-206ENST00000469757 HSBP1O75506 76 aa5.24□□□□□ -1.57
TRAPPC3-206ENST00000469757 SMR3BP02814 79 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC3-206ENST00000469757 BAGE3Q86Y29 109 aa5.24□□□□□ -1.57
TRAPPC3-206ENST00000469757 IFI27L1Q96BM0 104 aa5.24□□□□□ -1.57
TRAPPC3-206ENST00000469757 PACRGQ96M98 296 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC3-206ENST00000469757 IGKV2-24A0A0C4DH68 120 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms