RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 GAGE12FP0CL80 117 aa8.59□□□□□ -1.03
VARS2-205ENST00000469358 GAGE12GP0CL81 117 aa8.59□□□□□ -1.03
VARS2-205ENST00000469358 GAGE12IP0CL82 117 aa8.59□□□□□ -1.03
VARS2-205ENST00000469358 RPL36AP83881 106 aaKnown RBP8.58□□□□□ -1.04
VARS2-205ENST00000469358 RPL36ALQ969Q0 106 aaKnown RBP8.58□□□□□ -1.04
VARS2-205ENST00000469358 CDC42SE2Q9NRR3 84 aa8.58□□□□□ -1.04
VARS2-205ENST00000469358 F5H768 121 aa8.58□□□□□ -1.04
VARS2-205ENST00000469358 K7EQD1 137 aa8.58□□□□□ -1.04
VARS2-205ENST00000469358 RPL35AP18077 110 aaKnown RBP8.58□□□□□ -1.04
VARS2-205ENST00000469358 SMCR5Q8TEV8 140 aa8.58□□□□□ -1.04
VARS2-205ENST00000469358 LINC01600Q96MT4 127 aa8.57□□□□□ -1.04
VARS2-205ENST00000469358 COX7A2LO14548 114 aa8.57□□□□□ -1.04
VARS2-205ENST00000469358 DAZ2Q13117 558 aaKnown RBP8.57□□□□□ -1.04
VARS2-205ENST00000469358 DAZ4Q86SG3 579 aaKnown RBP8.57□□□□□ -1.04
VARS2-205ENST00000469358 DAZ3Q9NR90 486 aaKnown RBP8.57□□□□□ -1.04
VARS2-205ENST00000469358 C11orf68Q9H3H3 251 aaKnown RBP8.57□□□□□ -1.04
VARS2-205ENST00000469358 UBR5O95071 2799 aaPredicted RBP8.57□□□□□ -1.04
VARS2-205ENST00000469358 TRGV2A0A075B6R0 118 aa8.55□□□□□ -1.04
VARS2-205ENST00000469358 BAALC-AS2P0C853 105 aa8.55□□□□□ -1.04
VARS2-205ENST00000469358 SHISA2Q6UWI4 295 aa8.55□□□□□ -1.04
VARS2-205ENST00000469358 C22orf24Q9Y442 160 aa8.55□□□□□ -1.04
VARS2-205ENST00000469358 MIR7-3HGQ8N6C7 128 aa8.55□□□□□ -1.04
VARS2-205ENST00000469358 IGLV4-60A0A075B6I1 120 aa8.55□□□□□ -1.04
VARS2-205ENST00000469358 UBE2L6O14933 153 aa8.55□□□□□ -1.04
VARS2-205ENST00000469358 C9orf129Q5T035 196 aaKnown RBP8.55□□□□□ -1.04
VARS2-205ENST00000469358 GIG44P09565 113 aaPredicted RBP8.54□□□□□ -1.04
VARS2-205ENST00000469358 LINC00337Q8N6G1 96 aa8.54□□□□□ -1.04
VARS2-205ENST00000469358 BBC3Q96PG8 261 aaPredicted RBP8.54□□□□□ -1.04
VARS2-205ENST00000469358 IL17DQ8TAD2 202 aa8.54□□□□□ -1.04
VARS2-205ENST00000469358 CCL24O00175 119 aa8.53□□□□□ -1.04
VARS2-205ENST00000469358 PFN2P35080 140 aa8.53□□□□□ -1.04
VARS2-205ENST00000469358 DEFB121Q5J5C9 76 aa8.53□□□□□ -1.04
VARS2-205ENST00000469358 C5orf38Q86SI9 138 aa8.53□□□□□ -1.04
VARS2-205ENST00000469358 FAM236AA0A1B0GUQ0 79 aa8.52□□□□□ -1.04
VARS2-205ENST00000469358 FAM236BA0A1B0GV22 79 aa8.52□□□□□ -1.04
VARS2-205ENST00000469358 ATP5G1P05496 136 aa8.52□□□□□ -1.04
VARS2-205ENST00000469358 HIST2H2BCQ6DN03 193 aa8.52□□□□□ -1.04
VARS2-205ENST00000469358 TMEM243Q9BU79 118 aa8.52□□□□□ -1.04
VARS2-205ENST00000469358 IGKV2-28A0A075B6P5 120 aa8.52□□□□□ -1.05
VARS2-205ENST00000469358 IGKV2D-28P01615 120 aa8.52□□□□□ -1.05
VARS2-205ENST00000469358 Q6Q795 121 aa8.52□□□□□ -1.05
VARS2-205ENST00000469358 ESM1Q9NQ30 184 aa8.52□□□□□ -1.05
VARS2-205ENST00000469358 LINC00158P58513 81 aa8.52□□□□□ -1.05
VARS2-205ENST00000469358 A0A087WYN8 130 aa8.51□□□□□ -1.05
VARS2-205ENST00000469358 PLAC8L1A1L4L8 177 aa8.51□□□□□ -1.05
VARS2-205ENST00000469358 GAGE2AQ6NT46 116 aa8.51□□□□□ -1.05
VARS2-205ENST00000469358 DNAJC9-AS1A6NH13 148 aa8.51□□□□□ -1.05
VARS2-205ENST00000469358 CLPSL2Q6UWE3 100 aa8.51□□□□□ -1.05
VARS2-205ENST00000469358 SND1-IT1Q9HBX3 110 aa8.51□□□□□ -1.05
VARS2-205ENST00000469358 VWFP04275 2813 aa8.5□□□□□ -1.05
VARS2-205ENST00000469358 TRGV4A0A0C4DH28 118 aa8.5□□□□□ -1.05
VARS2-205ENST00000469358 FAM240AA0A1B0GVK7 77 aa8.5□□□□□ -1.05
VARS2-205ENST00000469358 DEFB113Q30KQ7 82 aa8.5□□□□□ -1.05
VARS2-205ENST00000469358 WFDC11Q8NEX6 87 aa8.5□□□□□ -1.05
VARS2-205ENST00000469358 COX7B2Q8TF08 81 aa8.5□□□□□ -1.05
VARS2-205ENST00000469358 HIVEP2P31629 2446 aa8.5□□□□□ -1.05
VARS2-205ENST00000469358 ITPR2Q14571 2701 aa8.5□□□□□ -1.05
VARS2-205ENST00000469358 TRBV10-1A0A0K0K1A3 114 aa8.5□□□□□ -1.05
VARS2-205ENST00000469358 SLPIP03973 132 aa8.5□□□□□ -1.05
VARS2-205ENST00000469358 CSDC2Q9Y534 153 aaKnown RBP8.5□□□□□ -1.05
VARS2-205ENST00000469358 A0A096LPF7 62 aa8.49□□□□□ -1.05
VARS2-205ENST00000469358 SMIM20Q8N5G0 67 aa8.49□□□□□ -1.05
VARS2-205ENST00000469358 CRPP02741 224 aa8.49□□□□□ -1.05
VARS2-205ENST00000469358 DEFB130BP0DP73 79 aa8.49□□□□□ -1.05
VARS2-205ENST00000469358 DEFB130AP0DP74 79 aa8.49□□□□□ -1.05
VARS2-205ENST00000469358 SMIM11BQ8TCY0 68 aa8.49□□□□□ -1.05
VARS2-205ENST00000469358 CCL18P55774 89 aa8.48□□□□□ -1.05
VARS2-205ENST00000469358 FAM19A3Q7Z5A8 133 aa8.47□□□□□ -1.05
VARS2-205ENST00000469358 TRBV7-7A0A0K0K1E9 115 aa8.47□□□□□ -1.05
VARS2-205ENST00000469358 KRTAP1-3Q8IUG1 177 aa8.47□□□□□ -1.05
VARS2-205ENST00000469358 OR13C6PQ8NH95 151 aa8.47□□□□□ -1.05
VARS2-205ENST00000469358 C14orf132Q9NPU4 83 aa8.47□□□□□ -1.05
VARS2-205ENST00000469358 TRACP01848 142 aa8.47□□□□□ -1.05
VARS2-205ENST00000469358 HERV-K104P63124 156 aa8.47□□□□□ -1.05
VARS2-205ENST00000469358 PRR3P79522 188 aaKnown RBP8.47□□□□□ -1.05
VARS2-205ENST00000469358 TENM4Q6N022 2769 aa8.46□□□□□ -1.06
VARS2-205ENST00000469358 MALP21145 153 aa8.46□□□□□ -1.06
VARS2-205ENST00000469358 XCL1P47992 114 aa8.46□□□□□ -1.06
VARS2-205ENST00000469358 PAX4O43316 350 aa8.45□□□□□ -1.06
VARS2-205ENST00000469358 IGHV3OR16-9A0A0B4J2B5 98 aa8.45□□□□□ -1.06
VARS2-205ENST00000469358 LECT2O14960 151 aa8.45□□□□□ -1.06
VARS2-205ENST00000469358 MRPL23Q16540 153 aaKnown RBP8.45□□□□□ -1.06
VARS2-205ENST00000469358 NOTCH2Q04721 2471 aa8.45□□□□□ -1.06
VARS2-205ENST00000469358 FHL2Q14192 279 aa8.44□□□□□ -1.06
VARS2-205ENST00000469358 TRBV6-8A0A0A6YYG3 113 aa8.44□□□□□ -1.06
VARS2-205ENST00000469358 NCR3O14931 201 aa8.44□□□□□ -1.06
VARS2-205ENST00000469358 RPL28P46779 137 aaKnown RBP8.44□□□□□ -1.06
VARS2-205ENST00000469358 TRAV13-2A0A0B4J235 113 aa8.44□□□□□ -1.06
VARS2-205ENST00000469358 SDIM1Q6ZPB5 146 aa8.44□□□□□ -1.06
VARS2-205ENST00000469358 COPS9Q8WXC6 57 aa8.44□□□□□ -1.06
VARS2-205ENST00000469358 TRAV25A0A0B4J276 109 aa8.43□□□□□ -1.06
VARS2-205ENST00000469358 Q8N3U1 123 aa8.43□□□□□ -1.06
VARS2-205ENST00000469358 C19orf73Q9NVV2 129 aa8.43□□□□□ -1.06
VARS2-205ENST00000469358 IGKV3D-7A0A0C4DH55 119 aa8.43□□□□□ -1.06
VARS2-205ENST00000469358 C16orf74Q96GX8 76 aa8.43□□□□□ -1.06
VARS2-205ENST00000469358 DNAL4O96015 105 aa8.42□□□□□ -1.06
VARS2-205ENST00000469358 LINC00643Q86TS7 51 aa8.42□□□□□ -1.06
VARS2-205ENST00000469358 CSNK1G2-AS1Q8NCQ2 148 aa8.42□□□□□ -1.06
VARS2-205ENST00000469358 LINC01006Q8NI28 216 aa8.42□□□□□ -1.06
VARS2-205ENST00000469358 KLK5Q9Y337 293 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms