RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-217ENST00000469223 JOSD1Q15040 202 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-217ENST00000469223 PMCHL1Q16048 86 aa8.05□□□□□ -1.12
HDAC6-217ENST00000469223 PET117Q6UWS5 81 aa8.05□□□□□ -1.12
HDAC6-217ENST00000469223 Q6ZN92 141 aa8.05□□□□□ -1.12
HDAC6-217ENST00000469223 COX11Q9Y6N1 276 aa8.05□□□□□ -1.12
HDAC6-217ENST00000469223 IGKV2D-24A0A075B6R9 120 aa8.04□□□□□ -1.12
HDAC6-217ENST00000469223 C2orf66Q6UXQ4 117 aa8.04□□□□□ -1.12
HDAC6-217ENST00000469223 TOMM6Q96B49 74 aa8.04□□□□□ -1.12
HDAC6-217ENST00000469223 IFI27L1Q96BM0 104 aa8.04□□□□□ -1.12
HDAC6-217ENST00000469223 SCGB3A1Q96QR1 104 aa8.04□□□□□ -1.12
HDAC6-217ENST00000469223 NPSP0C0P6 89 aa8.03□□□□□ -1.12
HDAC6-217ENST00000469223 C3orf79P0CE67 100 aa8.03□□□□□ -1.12
HDAC6-217ENST00000469223 KRTAP10-8P60410 259 aa8.03□□□□□ -1.12
HDAC6-217ENST00000469223 ERASQ7Z444 233 aa8.03□□□□□ -1.12
HDAC6-217ENST00000469223 RMI2Q96E14 147 aa8.03□□□□□ -1.12
HDAC6-217ENST00000469223 TMEM141Q96I45 108 aa8.03□□□□□ -1.12
HDAC6-217ENST00000469223 GTSF1LQ9H1H1 148 aa8.03□□□□□ -1.12
HDAC6-217ENST00000469223 CRCT1Q9UGL9 99 aa8.03□□□□□ -1.12
HDAC6-217ENST00000469223 GAGE12JA6NER3 117 aa8.02□□□□□ -1.13
HDAC6-217ENST00000469223 SYS1-DBNDD2H3BUS1 97 aa8.02□□□□□ -1.13
HDAC6-217ENST00000469223 PRSS1P07477 247 aa8.02□□□□□ -1.13
HDAC6-217ENST00000469223 GAGE1Q13065 139 aa8.02□□□□□ -1.13
HDAC6-217ENST00000469223 GAGE4Q13068 117 aa8.02□□□□□ -1.13
HDAC6-217ENST00000469223 GAGE5Q13069 117 aa8.02□□□□□ -1.13
HDAC6-217ENST00000469223 GAGE13Q4V321 117 aa8.02□□□□□ -1.13
HDAC6-217ENST00000469223 C12orf57Q99622 126 aa8.02□□□□□ -1.13
HDAC6-217ENST00000469223 TRBV25-1A0A075B6N4 114 aa8.01□□□□□ -1.13
HDAC6-217ENST00000469223 HSBP1L1C9JCN9 74 aa8.01□□□□□ -1.13
HDAC6-217ENST00000469223 UBE2L6O14933 153 aa8.01□□□□□ -1.13
HDAC6-217ENST00000469223 TSHBP01222 138 aa8.01□□□□□ -1.13
HDAC6-217ENST00000469223 UBE2D3P61077 147 aa8.01□□□□□ -1.13
HDAC6-217ENST00000469223 UBE2D2P62837 147 aa8.01□□□□□ -1.13
HDAC6-217ENST00000469223 TIMM17AQ99595 171 aa8.01□□□□□ -1.13
HDAC6-217ENST00000469223 A0A096LNJ9 63 aa8□□□□□ -1.13
HDAC6-217ENST00000469223 H7C423 109 aa8□□□□□ -1.13
HDAC6-217ENST00000469223 PKIAP61925 76 aa8□□□□□ -1.13
HDAC6-217ENST00000469223 PYY3Q5JQD4 70 aa8□□□□□ -1.13
HDAC6-217ENST00000469223 DGAT2L7PQ6IED9 249 aa8□□□□□ -1.13
HDAC6-217ENST00000469223 LINC00518Q8N0U6 118 aa8□□□□□ -1.13
HDAC6-217ENST00000469223 C20orf203Q8NBC4 194 aa8□□□□□ -1.13
HDAC6-217ENST00000469223 SPANXA1Q9NS26 97 aa8□□□□□ -1.13
HDAC6-217ENST00000469223 H0Y8G0 127 aa7.99□□□□□ -1.13
HDAC6-217ENST00000469223 C14orf177Q52M58 125 aa7.99□□□□□ -1.13
HDAC6-217ENST00000469223 PYGO1Q9Y3Y4 419 aa7.99□□□□□ -1.13
HDAC6-217ENST00000469223 TRAV12-1A0A0B4J245 112 aa7.98□□□□□ -1.13
HDAC6-217ENST00000469223 AMMECR1LQ6DCA0 310 aa7.98□□□□□ -1.13
HDAC6-217ENST00000469223 TMEM101Q96IK0 257 aa7.98□□□□□ -1.13
HDAC6-217ENST00000469223 TMEM243Q9BU79 118 aa7.98□□□□□ -1.13
HDAC6-217ENST00000469223 VAMP8Q9BV40 100 aa7.98□□□□□ -1.13
HDAC6-217ENST00000469223 LINC00694P0DN24 101 aa7.97□□□□□ -1.13
HDAC6-217ENST00000469223 PLNP26678 52 aa7.97□□□□□ -1.13
HDAC6-217ENST00000469223 LINC01545Q5VT33 79 aa7.97□□□□□ -1.13
HDAC6-217ENST00000469223 C2orf88Q9BSF0 95 aa7.97□□□□□ -1.13
HDAC6-217ENST00000469223 TIMM21Q9BVV7 248 aa7.97□□□□□ -1.13
HDAC6-217ENST00000469223 TSTD3H0UI37 97 aa7.96□□□□□ -1.14
HDAC6-217ENST00000469223 ZNF25P17030 456 aaPredicted RBP7.96□□□□□ -1.14
HDAC6-217ENST00000469223 PMVKQ15126 192 aa7.96□□□□□ -1.14
HDAC6-217ENST00000469223 VCX2Q9H322 139 aa7.96□□□□□ -1.14
HDAC6-217ENST00000469223 A0A087WX48 190 aa7.95□□□□□ -1.14
HDAC6-217ENST00000469223 TRBV6-8A0A0A6YYG3 113 aa7.95□□□□□ -1.14
HDAC6-217ENST00000469223 IGIPA6NJ69 53 aa7.95□□□□□ -1.14
HDAC6-217ENST00000469223 DPM2O94777 84 aa7.95□□□□□ -1.14
HDAC6-217ENST00000469223 REG3GQ6UW15 175 aa7.95□□□□□ -1.14
HDAC6-217ENST00000469223 TEX43Q6ZNM6 134 aa7.95□□□□□ -1.14
HDAC6-217ENST00000469223 LINC00173Q6ZV60 143 aa7.95□□□□□ -1.14
HDAC6-217ENST00000469223 CHCHD7Q9BUK0 85 aa7.95□□□□□ -1.14
HDAC6-217ENST00000469223 CSDC2Q9Y534 153 aaKnown RBP7.95□□□□□ -1.14
HDAC6-217ENST00000469223 F8VRH5 84 aa7.94□□□□□ -1.14
HDAC6-217ENST00000469223 RPL39P62891 51 aaKnown RBP7.94□□□□□ -1.14
HDAC6-217ENST00000469223 PRR3P79522 188 aaKnown RBP7.94□□□□□ -1.14
HDAC6-217ENST00000469223 CIRBPQ14011 172 aaKnown RBP7.94□□□□□ -1.14
HDAC6-217ENST00000469223 MRPL52Q86TS9 123 aaKnown RBP7.94□□□□□ -1.14
HDAC6-217ENST00000469223 C9orf163Q8N9P6 203 aa7.94□□□□□ -1.14
HDAC6-217ENST00000469223 OR5A1Q8NGJ0 315 aa7.94□□□□□ -1.14
HDAC6-217ENST00000469223 UBE2WQ96B02 151 aa7.94□□□□□ -1.14
HDAC6-217ENST00000469223 CHCHD5Q9BSY4 110 aa7.94□□□□□ -1.14
HDAC6-217ENST00000469223 KLK12Q9UKR0 248 aa7.94□□□□□ -1.14
HDAC6-217ENST00000469223 CHTOPQ9Y3Y2 248 aaKnown RBP7.94□□□□□ -1.14
HDAC6-217ENST00000469223 USP17L23D6RBM5 183 aa7.93□□□□□ -1.14
HDAC6-217ENST00000469223 IGKCP01834 107 aa7.93□□□□□ -1.14
HDAC6-217ENST00000469223 SEC11AP67812 179 aa7.93□□□□□ -1.14
HDAC6-217ENST00000469223 MRPS36P82909 103 aaKnown RBP7.93□□□□□ -1.14
HDAC6-217ENST00000469223 C7orf33Q8WU49 177 aa7.93□□□□□ -1.14
HDAC6-217ENST00000469223 UBE2D4Q9Y2X8 147 aa7.93□□□□□ -1.14
HDAC6-217ENST00000469223 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-217ENST00000469223 A0A087WYN8 130 aa7.92□□□□□ -1.14
HDAC6-217ENST00000469223 IGKV2-29A2NJV5 120 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-217ENST00000469223 CHTF8P0CG12 524 aa7.92□□□□□ -1.14
HDAC6-217ENST00000469223 FGF6P10767 208 aa7.92□□□□□ -1.14
HDAC6-217ENST00000469223 SDIM1Q6ZPB5 146 aa7.92□□□□□ -1.14
HDAC6-217ENST00000469223 Q9UF83 564 aa7.92□□□□□ -1.14
HDAC6-217ENST00000469223 HERVK_113P61574 105 aa7.91□□□□□ -1.14
HDAC6-217ENST00000469223 CST9LQ9H4G1 147 aa7.91□□□□□ -1.14
HDAC6-217ENST00000469223 IGLV4-3A0A075B6K6 122 aa7.9□□□□□ -1.14
HDAC6-217ENST00000469223 TMEM262E9PQX1 116 aa7.9□□□□□ -1.14
HDAC6-217ENST00000469223 NTM-AS1Q6ZSK4 140 aa7.9□□□□□ -1.14
HDAC6-217ENST00000469223 MRPL35Q9NZE8 188 aaKnown RBP7.9□□□□□ -1.14
HDAC6-217ENST00000469223 PAM16Q9Y3D7 125 aa7.9□□□□□ -1.14
HDAC6-217ENST00000469223 SPATA45Q537H7 98 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms