RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 C2orf82Q6UX34 121 aa11.31□□□□□ -0.6
TSPAN4-211ENST00000468468 HERVK_113P63121 156 aa11.31□□□□□ -0.6
TSPAN4-211ENST00000468468 CIRBPQ14011 172 aaKnown RBP11.31□□□□□ -0.6
TSPAN4-211ENST00000468468 H7C423 109 aa11.3□□□□□ -0.6
TSPAN4-211ENST00000468468 Q9H8V8 135 aa11.3□□□□□ -0.6
TSPAN4-211ENST00000468468 SETD2Q9BYW2 2564 aaPredicted RBP11.3□□□□□ -0.6
TSPAN4-211ENST00000468468 NDUFA7O95182 113 aa11.3□□□□□ -0.6
TSPAN4-211ENST00000468468 ZNF625Q96I27 306 aaPredicted RBP11.3□□□□□ -0.6
TSPAN4-211ENST00000468468 FASNP49327 2511 aaKnown RBP11.3□□□□□ -0.6
TSPAN4-211ENST00000468468 RPL36AP83881 106 aaKnown RBP11.29□□□□□ -0.6
TSPAN4-211ENST00000468468 MRPL23Q16540 153 aaKnown RBP11.29□□□□□ -0.6
TSPAN4-211ENST00000468468 IL17DQ8TAD2 202 aa11.29□□□□□ -0.6
TSPAN4-211ENST00000468468 RPL36ALQ969Q0 106 aaKnown RBP11.29□□□□□ -0.6
TSPAN4-211ENST00000468468 UBE2WQ96B02 151 aa11.29□□□□□ -0.6
TSPAN4-211ENST00000468468 TRAV25A0A0B4J276 109 aa11.28□□□□□ -0.6
TSPAN4-211ENST00000468468 IGLV5-39A0A0G2JS06 123 aa11.28□□□□□ -0.6
TSPAN4-211ENST00000468468 A0A0U1RRA0 63 aa11.28□□□□□ -0.6
TSPAN4-211ENST00000468468 Q6ZTI0 123 aa11.28□□□□□ -0.6
TSPAN4-211ENST00000468468 GCN1Q92616 2671 aaKnown RBP11.28□□□□□ -0.6
TSPAN4-211ENST00000468468 TRAV13-1A0A0B4J241 112 aa11.28□□□□□ -0.6
TSPAN4-211ENST00000468468 K7EQD1 137 aa11.28□□□□□ -0.6
TSPAN4-211ENST00000468468 NTM-AS1Q6ZSK4 140 aa11.28□□□□□ -0.6
TSPAN4-211ENST00000468468 SMR3AQ99954 134 aa11.28□□□□□ -0.6
TSPAN4-211ENST00000468468 LINC00308Q8TCZ7 52 aa11.28□□□□□ -0.6
TSPAN4-211ENST00000468468 WNK1Q9H4A3 2382 aa11.27□□□□□ -0.6
TSPAN4-211ENST00000468468 H3BT86 120 aa11.27□□□□□ -0.61
TSPAN4-211ENST00000468468 LST1O00453 97 aa11.27□□□□□ -0.61
TSPAN4-211ENST00000468468 CITED2Q99967 270 aaPredicted RBP11.27□□□□□ -0.61
TSPAN4-211ENST00000468468 TRBV10-1A0A0K0K1A3 114 aa11.26□□□□□ -0.61
TSPAN4-211ENST00000468468 SMIM1B2RUZ4 78 aa11.26□□□□□ -0.61
TSPAN4-211ENST00000468468 KLK5Q9Y337 293 aaPredicted RBP11.26□□□□□ -0.61
TSPAN4-211ENST00000468468 HECTD1Q9ULT8 2610 aa11.26□□□□□ -0.61
TSPAN4-211ENST00000468468 DAZ2Q13117 558 aaKnown RBP11.26□□□□□ -0.61
TSPAN4-211ENST00000468468 DAZ4Q86SG3 579 aaKnown RBP11.26□□□□□ -0.61
TSPAN4-211ENST00000468468 LINC01006Q8NI28 216 aa11.26□□□□□ -0.61
TSPAN4-211ENST00000468468 DAZ3Q9NR90 486 aaKnown RBP11.26□□□□□ -0.61
TSPAN4-211ENST00000468468 CCL24O00175 119 aa11.25□□□□□ -0.61
TSPAN4-211ENST00000468468 FAM19A3Q7Z5A8 133 aa11.25□□□□□ -0.61
TSPAN4-211ENST00000468468 TMEM126AQ9H061 195 aa11.24□□□□□ -0.61
TSPAN4-211ENST00000468468 NOP10Q9NPE3 64 aaKnown RBP11.24□□□□□ -0.61
TSPAN4-211ENST00000468468 CDC42SE2Q9NRR3 84 aa11.24□□□□□ -0.61
TSPAN4-211ENST00000468468 PRIMA1Q86XR5 153 aa11.23□□□□□ -0.61
TSPAN4-211ENST00000468468 RNASE1P07998 156 aaKnown RBP11.23□□□□□ -0.61
TSPAN4-211ENST00000468468 SOSTDC1Q6X4U4 206 aa11.22□□□□□ -0.61
TSPAN4-211ENST00000468468 FAM236AA0A1B0GUQ0 79 aa11.22□□□□□ -0.61
TSPAN4-211ENST00000468468 FAM236BA0A1B0GV22 79 aa11.22□□□□□ -0.61
TSPAN4-211ENST00000468468 NIPBLQ6KC79 2804 aaeCLIP11.22□□□□□ -0.61
TSPAN4-211ENST00000468468 F5H768 121 aa11.21□□□□□ -0.61
TSPAN4-211ENST00000468468 C5orf47Q569G3 176 aa11.21□□□□□ -0.61
TSPAN4-211ENST00000468468 UBE2L6O14933 153 aa11.21□□□□□ -0.62
TSPAN4-211ENST00000468468 COPS9Q8WXC6 57 aa11.21□□□□□ -0.62
TSPAN4-211ENST00000468468 TMEM243Q9BU79 118 aa11.2□□□□□ -0.62
TSPAN4-211ENST00000468468 NOTCH2Q04721 2471 aa11.2□□□□□ -0.62
TSPAN4-211ENST00000468468 C9orf153Q5TBE3 101 aa11.19□□□□□ -0.62
TSPAN4-211ENST00000468468 C16orf95Q9H693 158 aa11.19□□□□□ -0.62
TSPAN4-211ENST00000468468 TRGV2A0A075B6R0 118 aa11.18□□□□□ -0.62
TSPAN4-211ENST00000468468 SMIM9A6NGZ8 99 aa11.18□□□□□ -0.62
TSPAN4-211ENST00000468468 COX7A2LO14548 114 aa11.18□□□□□ -0.62
TSPAN4-211ENST00000468468 GIG44P09565 113 aaPredicted RBP11.18□□□□□ -0.62
TSPAN4-211ENST00000468468 HIVEP2P31629 2446 aa11.18□□□□□ -0.62
TSPAN4-211ENST00000468468 LOC100131303A0A0U1RQF7 123 aa11.18□□□□□ -0.62
TSPAN4-211ENST00000468468 HILS1P60008 231 aa11.18□□□□□ -0.62
TSPAN4-211ENST00000468468 FAM19A5Q7Z5A7 132 aaPredicted RBP11.18□□□□□ -0.62
TSPAN4-211ENST00000468468 WFDC10AQ9H1F0 79 aa11.18□□□□□ -0.62
TSPAN4-211ENST00000468468 RPL35AP18077 110 aaKnown RBP11.17□□□□□ -0.62
TSPAN4-211ENST00000468468 DEFB121Q5J5C9 76 aa11.17□□□□□ -0.62
TSPAN4-211ENST00000468468 PLAC8L1A1L4L8 177 aa11.16□□□□□ -0.62
TSPAN4-211ENST00000468468 C16orf74Q96GX8 76 aa11.16□□□□□ -0.62
TSPAN4-211ENST00000468468 PF4P02776 101 aa11.16□□□□□ -0.62
TSPAN4-211ENST00000468468 JMJD1CQ15652 2540 aa11.15□□□□□ -0.62
TSPAN4-211ENST00000468468 CMC4P56277 68 aaPredicted RBP11.15□□□□□ -0.62
TSPAN4-211ENST00000468468 SETXQ7Z333 2677 aaKnown RBP11.14□□□□□ -0.63
TSPAN4-211ENST00000468468 LY6G6DO95868 133 aa11.14□□□□□ -0.63
TSPAN4-211ENST00000468468 TRGV4A0A0C4DH28 118 aa11.14□□□□□ -0.63
TSPAN4-211ENST00000468468 IGKV3OR2-268A0A0C4DH90 116 aa11.14□□□□□ -0.63
TSPAN4-211ENST00000468468 TRBV7-7A0A0K0K1E9 115 aa11.14□□□□□ -0.63
TSPAN4-211ENST00000468468 OTOGQ6ZRI0 2925 aa11.14□□□□□ -0.63
TSPAN4-211ENST00000468468 FAM240AA0A1B0GVK7 77 aa11.13□□□□□ -0.63
TSPAN4-211ENST00000468468 TRBV6-4A0A1B0GX49 114 aa11.13□□□□□ -0.63
TSPAN4-211ENST00000468468 COX7B2Q8TF08 81 aa11.12□□□□□ -0.63
TSPAN4-211ENST00000468468 TOMM7Q9P0U1 55 aa11.12□□□□□ -0.63
TSPAN4-211ENST00000468468 C3orf22Q8N5N4 141 aa11.12□□□□□ -0.63
TSPAN4-211ENST00000468468 OVOL2Q9BRP0 275 aa11.11□□□□□ -0.63
TSPAN4-211ENST00000468468 C19orf73Q9NVV2 129 aa11.11□□□□□ -0.63
TSPAN4-211ENST00000468468 MIR7-3HGQ8N6C7 128 aa11.1□□□□□ -0.63
TSPAN4-211ENST00000468468 CSNK1G2-AS1Q8NCQ2 148 aa11.1□□□□□ -0.63
TSPAN4-211ENST00000468468 SMCR5Q8TEV8 140 aa11.1□□□□□ -0.63
TSPAN4-211ENST00000468468 IGLV4-60A0A075B6I1 120 aa11.1□□□□□ -0.63
TSPAN4-211ENST00000468468 IGLV1-51P01701 117 aa11.1□□□□□ -0.63
TSPAN4-211ENST00000468468 TRACP01848 142 aa11.1□□□□□ -0.63
TSPAN4-211ENST00000468468 KRTAP10-3P60369 221 aa11.1□□□□□ -0.63
TSPAN4-211ENST00000468468 J3KT08 172 aa11.09□□□□□ -0.63
TSPAN4-211ENST00000468468 FAM218AQ96MZ4 157 aa11.09□□□□□ -0.63
TSPAN4-211ENST00000468468 BAALC-AS2P0C853 105 aa11.09□□□□□ -0.63
TSPAN4-211ENST00000468468 TRBV6-8A0A0A6YYG3 113 aa11.08□□□□□ -0.64
TSPAN4-211ENST00000468468 TRAV13-2A0A0B4J235 113 aa11.08□□□□□ -0.64
TSPAN4-211ENST00000468468 FHL2Q14192 279 aa11.08□□□□□ -0.64
TSPAN4-211ENST00000468468 CYSTM1Q9H1C7 97 aa11.08□□□□□ -0.64
TSPAN4-211ENST00000468468 INAFM1C9JVW0 142 aa11.07□□□□□ -0.64
TSPAN4-211ENST00000468468 CRPP02741 224 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms