RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 RETNLBQ9BQ08 111 aa10.92□□□□□ -0.66
LINC00888-201ENST00000468380 SUMO2P61956 95 aaKnown RBP10.91□□□□□ -0.66
LINC00888-201ENST00000468380 FAM231DQ6ZW35 169 aa10.91□□□□□ -0.66
LINC00888-201ENST00000468380 FSIP2Q5CZC0 6907 aa10.9□□□□□ -0.66
LINC00888-201ENST00000468380 A0A1B0GUT8 65 aa10.9□□□□□ -0.66
LINC00888-201ENST00000468380 RPL39P62891 51 aaKnown RBP10.9□□□□□ -0.66
LINC00888-201ENST00000468380 TYMSOSQ8TAI1 123 aa10.89□□□□□ -0.67
LINC00888-201ENST00000468380 KIR2DL4Q99706 377 aa10.89□□□□□ -0.67
LINC00888-201ENST00000468380 HIGD1CA8MV81 97 aa10.88□□□□□ -0.67
LINC00888-201ENST00000468380 LCE2DQ5TA82 110 aaPredicted RBP10.88□□□□□ -0.67
LINC00888-201ENST00000468380 C2orf82Q6UX34 121 aa10.88□□□□□ -0.67
LINC00888-201ENST00000468380 BORCS7Q96B45 105 aa10.88□□□□□ -0.67
LINC00888-201ENST00000468380 CT83Q5H943 113 aa10.87□□□□□ -0.67
LINC00888-201ENST00000468380 CTDSP1Q9GZU7 261 aa10.87□□□□□ -0.67
LINC00888-201ENST00000468380 CDIP1Q9H305 208 aa10.87□□□□□ -0.67
LINC00888-201ENST00000468380 ANAPC11Q9NYG5 84 aa10.87□□□□□ -0.67
LINC00888-201ENST00000468380 NDUFC2-KCTD14E9PQ53 114 aa10.86□□□□□ -0.67
LINC00888-201ENST00000468380 CRYGAP11844 174 aa10.86□□□□□ -0.67
LINC00888-201ENST00000468380 TMEM18Q96B42 140 aa10.86□□□□□ -0.67
LINC00888-201ENST00000468380 CRCT1Q9UGL9 99 aa10.86□□□□□ -0.67
LINC00888-201ENST00000468380 C22orf24Q9Y442 160 aa10.86□□□□□ -0.67
LINC00888-201ENST00000468380 TRBV30A0A0K0K1B3 111 aa10.85□□□□□ -0.67
LINC00888-201ENST00000468380 NUPR1O60356 82 aa10.84□□□□□ -0.67
LINC00888-201ENST00000468380 PPP1R17O96001 155 aa10.84□□□□□ -0.67
LINC00888-201ENST00000468380 TPRXLQ17RH7 258 aa10.84□□□□□ -0.67
LINC00888-201ENST00000468380 KRTAP13-2Q52LG2 175 aa10.84□□□□□ -0.67
LINC00888-201ENST00000468380 TAGLN2P37802 199 aaKnown RBP10.83□□□□□ -0.68
LINC00888-201ENST00000468380 MRPS36P82909 103 aaKnown RBP10.83□□□□□ -0.68
LINC00888-201ENST00000468380 IFITM10A6NMD0 228 aa10.82□□□□□ -0.68
LINC00888-201ENST00000468380 MRPL51Q4U2R6 128 aaKnown RBP10.82□□□□□ -0.68
LINC00888-201ENST00000468380 PPP1R2P9O14990 202 aa10.81□□□□□ -0.68
LINC00888-201ENST00000468380 HBBP68871 147 aa10.81□□□□□ -0.68
LINC00888-201ENST00000468380 LINC00469Q8N7U9 141 aa10.81□□□□□ -0.68
LINC00888-201ENST00000468380 SPANXA1Q9NS26 97 aa10.81□□□□□ -0.68
LINC00888-201ENST00000468380 IGLV7-46A0A075B6I9 117 aa10.8□□□□□ -0.68
LINC00888-201ENST00000468380 LINC00242Q5T6M2 205 aa10.8□□□□□ -0.68
LINC00888-201ENST00000468380 PACRGQ96M98 296 aaPredicted RBP10.8□□□□□ -0.68
LINC00888-201ENST00000468380 TGIF2-C20orf24A0A0A6YYL0 155 aa10.79□□□□□ -0.68
LINC00888-201ENST00000468380 TMEM250H0YL14 139 aa10.79□□□□□ -0.68
LINC00888-201ENST00000468380 RPL28P46779 137 aaKnown RBP10.79□□□□□ -0.68
LINC00888-201ENST00000468380 RIGQ13278 110 aa10.79□□□□□ -0.68
LINC00888-201ENST00000468380 RGS21Q2M5E4 152 aa10.79□□□□□ -0.68
LINC00888-201ENST00000468380 C20orf78Q9BR46 151 aa10.79□□□□□ -0.68
LINC00888-201ENST00000468380 TRBV24-1A0A075B6N3 115 aa10.78□□□□□ -0.68
LINC00888-201ENST00000468380 ZNF727A8MUV8 499 aa10.78□□□□□ -0.68
LINC00888-201ENST00000468380 BCE1O60756 84 aa10.78□□□□□ -0.68
LINC00888-201ENST00000468380 RPL32P62910 135 aaKnown RBP10.78□□□□□ -0.68
LINC00888-201ENST00000468380 FAM104BQ5XKR9 115 aa10.78□□□□□ -0.68
LINC00888-201ENST00000468380 XAGE1AQ9HD64 81 aa10.78□□□□□ -0.68
LINC00888-201ENST00000468380 LBHQ53QV2 105 aaPredicted RBP10.77□□□□□ -0.69
LINC00888-201ENST00000468380 LINC01551Q86U37 167 aa10.77□□□□□ -0.69
LINC00888-201ENST00000468380 CEBPGP53567 150 aa10.76□□□□□ -0.69
LINC00888-201ENST00000468380 LINC00173Q6ZV60 143 aa10.76□□□□□ -0.69
LINC00888-201ENST00000468380 LINC00304Q8N9R0 145 aa10.76□□□□□ -0.69
LINC00888-201ENST00000468380 OSTCQ9NRP0 149 aa10.76□□□□□ -0.69
LINC00888-201ENST00000468380 TCAPO15273 167 aa10.75□□□□□ -0.69
LINC00888-201ENST00000468380 TNFRSF6BO95407 300 aa10.75□□□□□ -0.69
LINC00888-201ENST00000468380 V9GYV3 84 aa10.75□□□□□ -0.69
LINC00888-201ENST00000468380 LINC00862A6NCI5 91 aa10.74□□□□□ -0.69
LINC00888-201ENST00000468380 MRPL55Q7Z7F7 128 aaKnown RBP10.74□□□□□ -0.69
LINC00888-201ENST00000468380 SMIM2Q9BVW6 85 aa10.74□□□□□ -0.69
LINC00888-201ENST00000468380 TP73-AS1Q9UF72 201 aa10.73□□□□□ -0.69
LINC00888-201ENST00000468380 IGLV4-3A0A075B6K6 122 aa10.72□□□□□ -0.69
LINC00888-201ENST00000468380 CKS2P33552 79 aa10.72□□□□□ -0.69
LINC00888-201ENST00000468380 PPDPFQ9H3Y8 114 aa10.72□□□□□ -0.69
LINC00888-201ENST00000468380 RPL37AP8A6NKH3 93 aa10.71□□□□□ -0.69
LINC00888-201ENST00000468380 KRTAP13-1Q8IUC0 172 aa10.71□□□□□ -0.69
LINC00888-201ENST00000468380 LINC01561Q8N1V8 128 aa10.71□□□□□ -0.69
LINC00888-201ENST00000468380 LINC00167Q96N53 147 aa10.71□□□□□ -0.69
LINC00888-201ENST00000468380 SMIM7Q9BQ49 75 aa10.71□□□□□ -0.69
LINC00888-201ENST00000468380 KRTAP4-1Q9BYQ7 146 aa10.71□□□□□ -0.69
LINC00888-201ENST00000468380 NPYP01303 97 aa10.7□□□□□ -0.7
LINC00888-201ENST00000468380 LINC01547P58512 204 aaPredicted RBP10.7□□□□□ -0.7
LINC00888-201ENST00000468380 ZC2HC1BQ5TFG8 222 aa10.7□□□□□ -0.7
LINC00888-201ENST00000468380 SLC51BQ86UW2 128 aa10.7□□□□□ -0.7
LINC00888-201ENST00000468380 BATF3Q9NR55 127 aa10.7□□□□□ -0.7
LINC00888-201ENST00000468380 FAM229BQ4G0N7 80 aa10.69□□□□□ -0.7
LINC00888-201ENST00000468380 TOMM7Q9P0U1 55 aa10.69□□□□□ -0.7
LINC00888-201ENST00000468380 NAT8BQ9UHF3 227 aa10.69□□□□□ -0.7
LINC00888-201ENST00000468380 PYGO1Q9Y3Y4 419 aa10.69□□□□□ -0.7
LINC00888-201ENST00000468380 D6R8Y8 96 aa10.68□□□□□ -0.7
LINC00888-201ENST00000468380 IFI27P40305 119 aaPredicted RBP10.68□□□□□ -0.7
LINC00888-201ENST00000468380 CKS1BP61024 79 aa10.68□□□□□ -0.7
LINC00888-201ENST00000468380 C6orf226Q5I0X4 101 aa10.68□□□□□ -0.7
LINC00888-201ENST00000468380 PRSS2P07478 247 aa10.67□□□□□ -0.7
LINC00888-201ENST00000468380 FAM74A3Q4VXF1 159 aa10.66□□□□□ -0.7
LINC00888-201ENST00000468380 Q6ZN92 141 aa10.66□□□□□ -0.7
LINC00888-201ENST00000468380 TMEM141Q96I45 108 aa10.66□□□□□ -0.7
LINC00888-201ENST00000468380 EIF5A2Q9GZV4 153 aaKnown RBP10.66□□□□□ -0.7
LINC00888-201ENST00000468380 GAGE10A6NGK3 116 aa10.65□□□□□ -0.7
LINC00888-201ENST00000468380 IGKV2D-26A0A0A0MRZ7 120 aa10.64□□□□□ -0.71
LINC00888-201ENST00000468380 Q8IZM0 81 aa10.64□□□□□ -0.71
LINC00888-201ENST00000468380 ALKBH7Q9BT30 221 aaPredicted RBP10.64□□□□□ -0.71
LINC00888-201ENST00000468380 SMIM27A0A1W2PRY6 76 aa10.63□□□□□ -0.71
LINC00888-201ENST00000468380 UBE2AP49459 152 aa10.63□□□□□ -0.71
LINC00888-201ENST00000468380 CTAG1AP78358 180 aa10.63□□□□□ -0.71
LINC00888-201ENST00000468380 ASB16-AS1Q495Z4 193 aa10.63□□□□□ -0.71
LINC00888-201ENST00000468380 TEX43Q6ZNM6 134 aa10.63□□□□□ -0.71
LINC00888-201ENST00000468380 SRP19P09132 144 aaKnown RBP10.62□□□□□ -0.71
LINC00888-201ENST00000468380 RAB5AP20339 215 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms