RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 RPL18AQ02543 176 aaKnown RBP15.07■□□□□ 0
PTCH1-210ENST00000468211 A0A1B0GXF2 115 aa15.06■□□□□ 0
PTCH1-210ENST00000468211 TCAPO15273 167 aa15.05■□□□□ -0
PTCH1-210ENST00000468211 PEA15Q15121 130 aa15.05■□□□□ -0
PTCH1-210ENST00000468211 PSORS1C2Q9UIG4 136 aa15.05■□□□□ -0
PTCH1-210ENST00000468211 IGHV3OR16-9A0A0B4J2B5 98 aa15.04■□□□□ -0
PTCH1-210ENST00000468211 HBBP68871 147 aa15.04■□□□□ -0
PTCH1-210ENST00000468211 PHF5AQ7RTV0 110 aaKnown RBP15.04■□□□□ -0
PTCH1-210ENST00000468211 RNF213Q63HN8 5207 aa15.03■□□□□ -0
PTCH1-210ENST00000468211 OR10D4PQ8NGN7 298 aa15.03■□□□□ -0
PTCH1-210ENST00000468211 ORAOV1Q8WV07 137 aa15.03■□□□□ -0
PTCH1-210ENST00000468211 SPANXA1Q9NS26 97 aa15.03■□□□□ -0
PTCH1-210ENST00000468211 MRPS36P82909 103 aaKnown RBP15.02■□□□□ -0
PTCH1-210ENST00000468211 RNF151Q2KHN1 245 aa15.02■□□□□ -0
PTCH1-210ENST00000468211 C10orf25Q5T742 122 aa15.02■□□□□ -0
PTCH1-210ENST00000468211 MRPL35Q9NZE8 188 aaKnown RBP15.01□□□□□ -0.01
PTCH1-210ENST00000468211 F8W036 122 aa15□□□□□ -0.01
PTCH1-210ENST00000468211 IFITM10A6NMD0 228 aa14.99□□□□□ -0.01
PTCH1-210ENST00000468211 S100A8P05109 93 aa14.99□□□□□ -0.01
PTCH1-210ENST00000468211 SMDT1Q9H4I9 107 aa14.99□□□□□ -0.01
PTCH1-210ENST00000468211 MT-ND6P03923 174 aa14.98□□□□□ -0.01
PTCH1-210ENST00000468211 UNQ6190/PRO20217Q6UXQ8 127 aa14.98□□□□□ -0.01
PTCH1-210ENST00000468211 FAM168BA1KXE4 195 aa14.97□□□□□ -0.01
PTCH1-210ENST00000468211 PPBPP02775 128 aa14.97□□□□□ -0.01
PTCH1-210ENST00000468211 KRTAP11-1Q8IUC1 163 aa14.97□□□□□ -0.01
PTCH1-210ENST00000468211 C1orf137Q5JT78 98 aa14.96□□□□□ -0.01
PTCH1-210ENST00000468211 C6orf48Q9UBA6 75 aa14.96□□□□□ -0.01
PTCH1-210ENST00000468211 NDUFA1O15239 70 aa14.95□□□□□ -0.02
PTCH1-210ENST00000468211 TMEM136Q6ZRR5 245 aa14.95□□□□□ -0.02
PTCH1-210ENST00000468211 ORMDL3Q8N138 153 aa14.95□□□□□ -0.02
PTCH1-210ENST00000468211 F8WDY8 70 aa14.94□□□□□ -0.02
PTCH1-210ENST00000468211 KIAA0087Q14695 138 aa14.94□□□□□ -0.02
PTCH1-210ENST00000468211 PRELID3AQ96N28 172 aa14.94□□□□□ -0.02
PTCH1-210ENST00000468211 IMMP2LQ96T52 175 aa14.94□□□□□ -0.02
PTCH1-210ENST00000468211 IGLV4-3A0A075B6K6 122 aa14.93□□□□□ -0.02
PTCH1-210ENST00000468211 TLX1NBP0CAT3 122 aa14.92□□□□□ -0.02
PTCH1-210ENST00000468211 LINC00242Q5T6M2 205 aa14.92□□□□□ -0.02
PTCH1-210ENST00000468211 KRTAP7-1Q8IUC3 87 aa14.92□□□□□ -0.02
PTCH1-210ENST00000468211 PYGO1Q9Y3Y4 419 aa14.92□□□□□ -0.02
PTCH1-210ENST00000468211 A0A087WZ39 114 aa14.91□□□□□ -0.02
PTCH1-210ENST00000468211 RAB5AP20339 215 aa14.91□□□□□ -0.02
PTCH1-210ENST00000468211 IFI27P40305 119 aaPredicted RBP14.91□□□□□ -0.02
PTCH1-210ENST00000468211 ATP5L2Q7Z4Y8 100 aa14.91□□□□□ -0.02
PTCH1-210ENST00000468211 TGIF2-C20orf24A0A0A6YYL0 155 aa14.9□□□□□ -0.02
PTCH1-210ENST00000468211 GAGE2EQ4V326 116 aa14.9□□□□□ -0.02
PTCH1-210ENST00000468211 FAM19A5Q7Z5A7 132 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-210ENST00000468211 GAGE2DQ9UEU5 116 aa14.9□□□□□ -0.02
PTCH1-210ENST00000468211 LOC389332A0A1B0GUA5 103 aa14.89□□□□□ -0.03
PTCH1-210ENST00000468211 IGLV7-43P04211 117 aa14.89□□□□□ -0.03
PTCH1-210ENST00000468211 ZC2HC1BQ5TFG8 222 aa14.89□□□□□ -0.03
PTCH1-210ENST00000468211 PRSS47A8MTI9 375 aa14.88□□□□□ -0.03
PTCH1-210ENST00000468211 C2orf82Q6UX34 121 aa14.88□□□□□ -0.03
PTCH1-210ENST00000468211 TMEM141Q96I45 108 aa14.88□□□□□ -0.03
PTCH1-210ENST00000468211 UBE2D1P51668 147 aa14.85□□□□□ -0.03
PTCH1-210ENST00000468211 LINC00173Q6ZV60 143 aa14.85□□□□□ -0.03
PTCH1-210ENST00000468211 PRR26Q8N8Z3 221 aa14.84□□□□□ -0.03
PTCH1-210ENST00000468211 TEX43Q6ZNM6 134 aa14.83□□□□□ -0.04
PTCH1-210ENST00000468211 DIRC1Q969H9 104 aa14.83□□□□□ -0.04
PTCH1-210ENST00000468211 MAP1LC3AQ9H492 121 aa14.83□□□□□ -0.04
PTCH1-210ENST00000468211 C2orf66Q6UXQ4 117 aa14.82□□□□□ -0.04
PTCH1-210ENST00000468211 Q8N8P6 123 aa14.82□□□□□ -0.04
PTCH1-210ENST00000468211 LAMTOR2Q9Y2Q5 125 aa14.82□□□□□ -0.04
PTCH1-210ENST00000468211 LPAP08519 4548 aa14.81□□□□□ -0.04
PTCH1-210ENST00000468211 TRBV30A0A0K0K1B3 111 aa14.81□□□□□ -0.04
PTCH1-210ENST00000468211 C9orf129Q5T035 196 aaKnown RBP14.81□□□□□ -0.04
PTCH1-210ENST00000468211 CYSLTR1Q9Y271 337 aa14.81□□□□□ -0.04
PTCH1-210ENST00000468211 H0Y9J4 135 aa14.8□□□□□ -0.04
PTCH1-210ENST00000468211 M0QXV9 152 aa14.8□□□□□ -0.04
PTCH1-210ENST00000468211 AMELXQ99217 191 aa14.8□□□□□ -0.04
PTCH1-210ENST00000468211 NDUFC2-KCTD14E9PQ53 114 aa14.79□□□□□ -0.04
PTCH1-210ENST00000468211 LINC01561Q8N1V8 128 aa14.78□□□□□ -0.04
PTCH1-210ENST00000468211 IGIPA6NJ69 53 aa14.77□□□□□ -0.05
PTCH1-210ENST00000468211 PNRC1Q12796 327 aaPredicted RBP14.77□□□□□ -0.05
PTCH1-210ENST00000468211 ANAPC16Q96DE5 110 aa14.77□□□□□ -0.05
PTCH1-210ENST00000468211 PACRGQ96M98 296 aaPredicted RBP14.77□□□□□ -0.05
PTCH1-210ENST00000468211 C2orf88Q9BSF0 95 aa14.77□□□□□ -0.05
PTCH1-210ENST00000468211 MT-ND4LP03901 98 aa14.76□□□□□ -0.05
PTCH1-210ENST00000468211 KRTAP1-4P0C5Y4 121 aa14.76□□□□□ -0.05
PTCH1-210ENST00000468211 VCX2Q9H322 139 aa14.76□□□□□ -0.05
PTCH1-210ENST00000468211 UBE2BP63146 152 aa14.75□□□□□ -0.05
PTCH1-210ENST00000468211 Q6ZN92 141 aa14.75□□□□□ -0.05
PTCH1-210ENST00000468211 TOMM7Q9P0U1 55 aa14.75□□□□□ -0.05
PTCH1-210ENST00000468211 ORMDL2Q53FV1 153 aa14.73□□□□□ -0.05
PTCH1-210ENST00000468211 FAM19A3Q7Z5A8 133 aa14.73□□□□□ -0.05
PTCH1-210ENST00000468211 LINC00469Q8N7U9 141 aa14.72□□□□□ -0.05
PTCH1-210ENST00000468211 PRSS2P07478 247 aa14.7□□□□□ -0.06
PTCH1-210ENST00000468211 NPSP0C0P6 89 aa14.7□□□□□ -0.06
PTCH1-210ENST00000468211 CDKN2A-AS1Q9UH64 79 aa14.7□□□□□ -0.06
PTCH1-210ENST00000468211 K7EMI3 77 aa14.69□□□□□ -0.06
PTCH1-210ENST00000468211 CKS1BP61024 79 aa14.69□□□□□ -0.06
PTCH1-210ENST00000468211 C6orf226Q5I0X4 101 aa14.69□□□□□ -0.06
PTCH1-210ENST00000468211 Q8IZM0 81 aa14.69□□□□□ -0.06
PTCH1-210ENST00000468211 ALKBH7Q9BT30 221 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-210ENST00000468211 CTDSP1Q9GZU7 261 aa14.68□□□□□ -0.06
PTCH1-210ENST00000468211 XAGE1AQ9HD64 81 aa14.68□□□□□ -0.06
PTCH1-210ENST00000468211 NXT2Q9NPJ8 142 aaKnown RBP14.68□□□□□ -0.06
PTCH1-210ENST00000468211 IGLV1-50A0A075B6I6 118 aa14.67□□□□□ -0.06
PTCH1-210ENST00000468211 KIAA1644Q3SXP7 199 aa14.67□□□□□ -0.06
PTCH1-210ENST00000468211 C22orf24Q9Y442 160 aa14.66□□□□□ -0.06
PTCH1-210ENST00000468211 RAB14P61106 215 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms