RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 RHOHQ15669 191 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 FAM222AQ5U5X8 452 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 C11orf71Q6IPW1 123 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 C2orf66Q6UXQ4 117 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 LINC00643Q86TS7 51 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 DYNAPQ8N1N2 210 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 PTH2Q96A98 100 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 PLEKHB2Q96CS7 222 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 LITAFQ99732 161 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 DEFB127Q9H1M4 99 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 DPH3P1Q9H4G8 78 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 C21orf62Q9NYP8 219 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 ZNRD1Q9P1U0 126 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 CTSZQ9UBR2 303 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 VPREB3Q9UKI3 123 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 PYGO1Q9Y3Y4 419 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 FAT2Q9NYQ8 4349 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 IGKV2-40A0A087WW87 121 aaPredicted RBP2.47□□□□□ -2.01
SORT1-202ENST00000466471 TRAV8-4A0A0B4J246 113 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 CLPSL1A2RUU4 121 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 ODF3BA8MYP8 253 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 EPM2AB3EWF7 344 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 H7C423 109 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 J3QQQ9 107 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 M0R1W7 72 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 LST1O00453 97 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 IGKV2D-40P01614 121 aaPredicted RBP2.47□□□□□ -2.01
SORT1-202ENST00000466471 IGHV3-48P01763 117 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 ORM1P02763 201 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 IGKV2-30P06310 120 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 RNASE4P34096 147 aaKnown RBP2.47□□□□□ -2.01
SORT1-202ENST00000466471 EFNA4P52798 201 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 CRIP2P52943 208 aaPredicted RBP2.47□□□□□ -2.01
SORT1-202ENST00000466471 LMO4P61968 165 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 NSUN5P1Q3KNT7 163 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 C5orf47Q569G3 176 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 SMIM20Q8N5G0 67 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 C3orf22Q8N5N4 141 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 ZFAND2AQ8N6M9 145 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 DAND5Q8N907 189 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 Q8N9P0 234 aaPredicted RBP2.47□□□□□ -2.01
SORT1-202ENST00000466471 DCANP1Q8TF63 244 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 KIR2DL4Q99706 377 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 DPM3Q9P2X0 92 aa2.47□□□□□ -2.01
SORT1-202ENST00000466471 ZNF256Q9Y2P7 627 aaPredicted RBP2.47□□□□□ -2.01
SORT1-202ENST00000466471 FAT4Q6V0I7 4981 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 TRAV2A0A0B4J234 112 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 TRAV21A0A0B4J279 112 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 IGHV3-16A0A0C4DH30 117 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 LOC107984156A0A0G2JMH3 177 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 C9JAW5 83 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 SOCS3O14543 225 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 OVOL1O14753 267 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 BCE1O60756 84 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 TRGV3P03979 118 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 CNTFRP26992 372 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 TSPEAR-AS2P59090 65 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 NANOS2P60321 138 aaKnown RBP2.46□□□□□ -2.02
SORT1-202ENST00000466471 KRTAP10-3P60369 221 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 KRTAP10-7P60409 375 aaPredicted RBP2.46□□□□□ -2.02
SORT1-202ENST00000466471 MRPS36P82909 103 aaKnown RBP2.46□□□□□ -2.02
SORT1-202ENST00000466471 MEIG1Q5JSS6 88 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 MINOS1Q5TGZ0 78 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
SORT1-202ENST00000466471 C2orf82Q6UX34 121 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 SCGB1D4Q6XE38 83 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 FAM19A3Q7Z5A8 133 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 ARL17AQ8IVW1 177 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 CSNK1G2-AS1Q8NCQ2 148 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 TMEM101Q96IK0 257 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 OBSCN-AS1Q96MR7 158 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 METTL26Q96S19 204 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 MINOS1-NBL1R4GNA1 71 aa2.46□□□□□ -2.02
SORT1-202ENST00000466471 APOBP04114 4563 aaKnown RBP2.46□□□□□ -2.02
SORT1-202ENST00000466471 TMSB15BA0A087X1C1 80 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 TRBV7-1A0A0A6YYK4 115 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 KLLNB2CW77 178 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 H3BMM0 161 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 M0R1B8 84 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 TRACP01848 142 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 COX6CP09669 75 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 RNASE3P12724 160 aaKnown RBP2.45□□□□□ -2.02
SORT1-202ENST00000466471 COX7CP15954 63 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 C9orf66Q5T8R8 295 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 SPANXN1Q5VSR9 72 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 LYPD2Q6UXB3 125 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 Q6ZQT7 251 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 MUSTN1Q8IVN3 82 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 CNEP1R1Q8N9A8 125 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 KLHL30-AS1Q8NEE0 82 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 DEFB108BQ8NET1 73 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 UBE2WQ96B02 151 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 DUX3Q96PT4 197 aa2.45□□□□□ -2.02
SORT1-202ENST00000466471 TIMM8BQ9Y5J9 83 aaPredicted RBP2.45□□□□□ -2.02
SORT1-202ENST00000466471 FLG2Q5D862 2391 aaPredicted RBP2.45□□□□□ -2.02
SORT1-202ENST00000466471 IGHV7-81A0A0B4J1V7 117 aa2.44□□□□□ -2.02
SORT1-202ENST00000466471 IGHV1-58A0A0C4DH39 117 aa2.44□□□□□ -2.02
SORT1-202ENST00000466471 TEX49A0A1B0GTD5 131 aa2.44□□□□□ -2.02
SORT1-202ENST00000466471 SMIM9A6NGZ8 99 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms