RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SDIM1Q6ZPB5 146 aa8.27□□□□□ -1.09
COL5A1-206ENST00000465877 PKHD1L1Q86WI1 4243 aa8.26□□□□□ -1.09
COL5A1-206ENST00000465877 ZNF561-AS1K7EIQ3 104 aa8.26□□□□□ -1.09
COL5A1-206ENST00000465877 FABP9Q0Z7S8 132 aa8.26□□□□□ -1.09
COL5A1-206ENST00000465877 Q6ZN92 141 aa8.26□□□□□ -1.09
COL5A1-206ENST00000465877 LINC00173Q6ZV60 143 aa8.26□□□□□ -1.09
COL5A1-206ENST00000465877 C5orf38Q86SI9 138 aa8.26□□□□□ -1.09
COL5A1-206ENST00000465877 CARD19Q96LW7 228 aa8.26□□□□□ -1.09
COL5A1-206ENST00000465877 IGHV3OR16-9A0A0B4J2B5 98 aa8.25□□□□□ -1.09
COL5A1-206ENST00000465877 APOMO95445 188 aa8.25□□□□□ -1.09
COL5A1-206ENST00000465877 NPSP0C0P6 89 aa8.25□□□□□ -1.09
COL5A1-206ENST00000465877 CHTF8P0CG12 524 aa8.25□□□□□ -1.09
COL5A1-206ENST00000465877 CIRBPQ14011 172 aaKnown RBP8.25□□□□□ -1.09
COL5A1-206ENST00000465877 PRSS3P2Q8NHM4 247 aa8.25□□□□□ -1.09
COL5A1-206ENST00000465877 SPACA4Q8TDM5 124 aa8.25□□□□□ -1.09
COL5A1-206ENST00000465877 C2orf88Q9BSF0 95 aa8.25□□□□□ -1.09
COL5A1-206ENST00000465877 IGLV4-69A0A075B6H9 119 aa8.24□□□□□ -1.09
COL5A1-206ENST00000465877 IGIPA6NJ69 53 aa8.24□□□□□ -1.09
COL5A1-206ENST00000465877 UBE2D1P51668 147 aa8.24□□□□□ -1.09
COL5A1-206ENST00000465877 COX6A2Q02221 97 aa8.24□□□□□ -1.09
COL5A1-206ENST00000465877 SPAG11BQ08648 103 aa8.24□□□□□ -1.09
COL5A1-206ENST00000465877 OR10D4PQ8NGN7 298 aa8.24□□□□□ -1.09
COL5A1-206ENST00000465877 TOMM6Q96B49 74 aa8.24□□□□□ -1.09
COL5A1-206ENST00000465877 TIMM17AQ99595 171 aa8.24□□□□□ -1.09
COL5A1-206ENST00000465877 LINC01546A6NGU7 62 aa8.23□□□□□ -1.09
COL5A1-206ENST00000465877 G0S2P27469 103 aa8.23□□□□□ -1.09
COL5A1-206ENST00000465877 SYCNQ0VAF6 134 aa8.23□□□□□ -1.09
COL5A1-206ENST00000465877 LINC00242Q5T6M2 205 aa8.23□□□□□ -1.09
COL5A1-206ENST00000465877 ZC2HC1BQ5TFG8 222 aa8.23□□□□□ -1.09
COL5A1-206ENST00000465877 ORAOV1Q8WV07 137 aa8.23□□□□□ -1.09
COL5A1-206ENST00000465877 AMELXQ99217 191 aa8.23□□□□□ -1.09
COL5A1-206ENST00000465877 SMCO4Q9NRQ5 59 aa8.23□□□□□ -1.09
COL5A1-206ENST00000465877 TRAPPC1Q9Y5R8 145 aa8.23□□□□□ -1.09
COL5A1-206ENST00000465877 IGKV2-24A0A0C4DH68 120 aa8.22□□□□□ -1.09
COL5A1-206ENST00000465877 PLA2G1BP04054 148 aaKnown RBP8.22□□□□□ -1.09
COL5A1-206ENST00000465877 Q6ZRU5 148 aa8.22□□□□□ -1.09
COL5A1-206ENST00000465877 FA2HQ7L5A8 372 aa8.22□□□□□ -1.09
COL5A1-206ENST00000465877 C2orf48Q96LS8 159 aa8.22□□□□□ -1.09
COL5A1-206ENST00000465877 YPEL4Q96NS1 127 aa8.22□□□□□ -1.09
COL5A1-206ENST00000465877 CAMK2N2Q96S95 79 aa8.22□□□□□ -1.09
COL5A1-206ENST00000465877 PKIGQ9Y2B9 76 aa8.22□□□□□ -1.09
COL5A1-206ENST00000465877 A0A096LNI7 61 aa8.21□□□□□ -1.1
COL5A1-206ENST00000465877 INAFM2P0DMQ5 153 aa8.21□□□□□ -1.1
COL5A1-206ENST00000465877 PAPPA-AS1Q5QFB9 102 aa8.21□□□□□ -1.1
COL5A1-206ENST00000465877 CBLN2Q8IUK8 224 aa8.21□□□□□ -1.1
COL5A1-206ENST00000465877 SLC7A5P1Q8MH63 180 aa8.21□□□□□ -1.1
COL5A1-206ENST00000465877 C18orf32Q8TCD1 76 aa8.21□□□□□ -1.1
COL5A1-206ENST00000465877 VCX2Q9H322 139 aa8.21□□□□□ -1.1
COL5A1-206ENST00000465877 A0A087WYN8 130 aa8.2□□□□□ -1.1
COL5A1-206ENST00000465877 A0A087WZ39 114 aa8.2□□□□□ -1.1
COL5A1-206ENST00000465877 LINC01549A6NIU2 74 aa8.2□□□□□ -1.1
COL5A1-206ENST00000465877 ERASQ7Z444 233 aa8.2□□□□□ -1.1
COL5A1-206ENST00000465877 FAM19A3Q7Z5A8 133 aa8.19□□□□□ -1.1
COL5A1-206ENST00000465877 SCGB3A1Q96QR1 104 aa8.19□□□□□ -1.1
COL5A1-206ENST00000465877 KRTAP10-4P60372 401 aaPredicted RBP8.18□□□□□ -1.1
COL5A1-206ENST00000465877 MAJINQ3KP22 176 aa8.18□□□□□ -1.1
COL5A1-206ENST00000465877 URB1-AS1Q96HZ7 61 aa8.18□□□□□ -1.1
COL5A1-206ENST00000465877 PLAC8Q9NZF1 115 aa8.18□□□□□ -1.1
COL5A1-206ENST00000465877 FAT3Q8TDW7 4589 aa8.18□□□□□ -1.1
COL5A1-206ENST00000465877 FLG2Q5D862 2391 aaPredicted RBP8.18□□□□□ -1.1
COL5A1-206ENST00000465877 A0A096LNJ9 63 aa8.17□□□□□ -1.1
COL5A1-206ENST00000465877 LOC107984640A0A0U1RRK4 108 aa8.17□□□□□ -1.1
COL5A1-206ENST00000465877 NDUFA1O15239 70 aa8.17□□□□□ -1.1
COL5A1-206ENST00000465877 RPL37AP61513 92 aaKnown RBP8.17□□□□□ -1.1
COL5A1-206ENST00000465877 HERVK_113P63121 156 aa8.17□□□□□ -1.1
COL5A1-206ENST00000465877 LINC00474Q9P2X8 69 aa8.17□□□□□ -1.1
COL5A1-206ENST00000465877 F8WDY8 70 aa8.16□□□□□ -1.1
COL5A1-206ENST00000465877 SEC11AP67812 179 aa8.16□□□□□ -1.1
COL5A1-206ENST00000465877 RPL18AQ02543 176 aaKnown RBP8.16□□□□□ -1.1
COL5A1-206ENST00000465877 LINC01561Q8N1V8 128 aa8.16□□□□□ -1.1
COL5A1-206ENST00000465877 STPG4Q8N801 248 aa8.16□□□□□ -1.1
COL5A1-206ENST00000465877 DPH3Q96FX2 82 aa8.16□□□□□ -1.1
COL5A1-206ENST00000465877 MRPL35Q9NZE8 188 aaKnown RBP8.16□□□□□ -1.1
COL5A1-206ENST00000465877 LRP1Q07954 4544 aaKnown RBP8.15□□□□□ -1.1
COL5A1-206ENST00000465877 A0A0J9YXV3 536 aa8.15□□□□□ -1.1
COL5A1-206ENST00000465877 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.15□□□□□ -1.1
COL5A1-206ENST00000465877 HBDP02042 147 aa8.15□□□□□ -1.1
COL5A1-206ENST00000465877 LINC00614P0C842 121 aa8.15□□□□□ -1.1
COL5A1-206ENST00000465877 PTTG1IPP53801 180 aa8.15□□□□□ -1.1
COL5A1-206ENST00000465877 KIAA0087Q14695 138 aa8.15□□□□□ -1.1
COL5A1-206ENST00000465877 GEMIN7Q9H840 131 aaKnown RBP8.15□□□□□ -1.1
COL5A1-206ENST00000465877 CDKN2A-AS1Q9UH64 79 aa8.15□□□□□ -1.1
COL5A1-206ENST00000465877 RAB5BP61020 215 aa8.14□□□□□ -1.11
COL5A1-206ENST00000465877 GAGE2BQ13066 116 aa8.14□□□□□ -1.11
COL5A1-206ENST00000465877 PMCHL1Q16048 86 aa8.14□□□□□ -1.11
COL5A1-206ENST00000465877 RNF151Q2KHN1 245 aa8.14□□□□□ -1.11
COL5A1-206ENST00000465877 C10orf25Q5T742 122 aa8.14□□□□□ -1.11
COL5A1-206ENST00000465877 PACRGQ96M98 296 aaPredicted RBP8.14□□□□□ -1.11
COL5A1-206ENST00000465877 C6orf48Q9UBA6 75 aa8.14□□□□□ -1.11
COL5A1-206ENST00000465877 DMBT1Q9UGM3 2413 aaPredicted RBP8.13□□□□□ -1.11
COL5A1-206ENST00000465877 PMVKQ15126 192 aa8.13□□□□□ -1.11
COL5A1-206ENST00000465877 LINC00469Q8N7U9 141 aa8.13□□□□□ -1.11
COL5A1-206ENST00000465877 HERC1Q15751 4861 aa8.13□□□□□ -1.11
COL5A1-206ENST00000465877 TINCRA0A1B0GVN0 87 aa8.12□□□□□ -1.11
COL5A1-206ENST00000465877 C2orf82Q6UX34 121 aa8.12□□□□□ -1.11
COL5A1-206ENST00000465877 UNQ6190/PRO20217Q6UXQ8 127 aa8.12□□□□□ -1.11
COL5A1-206ENST00000465877 Q8IZM0 81 aa8.12□□□□□ -1.11
COL5A1-206ENST00000465877 C7orf33Q8WU49 177 aa8.12□□□□□ -1.11
COL5A1-206ENST00000465877 CST9LQ9H4G1 147 aa8.12□□□□□ -1.11
COL5A1-206ENST00000465877 TOMM7Q9P0U1 55 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms