RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 AMELXQ99217 191 aa11.13□□□□□ -0.63
VPS52-215ENST00000464425 VCX2Q9H322 139 aa11.13□□□□□ -0.63
VPS52-215ENST00000464425 GAGE12HA6NDE8 117 aa11.12□□□□□ -0.63
VPS52-215ENST00000464425 HSBP1O75506 76 aa11.12□□□□□ -0.63
VPS52-215ENST00000464425 SERF1AO75920 110 aa11.12□□□□□ -0.63
VPS52-215ENST00000464425 PRSS1P07477 247 aa11.12□□□□□ -0.63
VPS52-215ENST00000464425 XGP55808 180 aa11.12□□□□□ -0.63
VPS52-215ENST00000464425 LINC00310P59036 64 aa11.12□□□□□ -0.63
VPS52-215ENST00000464425 PMCHL1Q16048 86 aa11.12□□□□□ -0.63
VPS52-215ENST00000464425 TRAV13-1A0A0B4J241 112 aa11.11□□□□□ -0.63
VPS52-215ENST00000464425 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.11□□□□□ -0.63
VPS52-215ENST00000464425 HAMPP81172 84 aa11.11□□□□□ -0.63
VPS52-215ENST00000464425 FAM30AQ9NZY2 134 aa11.11□□□□□ -0.63
VPS52-215ENST00000464425 IFITM10A6NMD0 228 aa11.1□□□□□ -0.63
VPS52-215ENST00000464425 CD164L2Q6UWJ8 174 aa11.1□□□□□ -0.63
VPS52-215ENST00000464425 LINC00173Q6ZV60 143 aa11.1□□□□□ -0.63
VPS52-215ENST00000464425 C2orf88Q9BSF0 95 aa11.1□□□□□ -0.63
VPS52-215ENST00000464425 ATP5LO75964 103 aa11.09□□□□□ -0.63
VPS52-215ENST00000464425 KRTAP4-5Q9BYR2 181 aa11.09□□□□□ -0.63
VPS52-215ENST00000464425 DNAH8Q96JB1 4490 aa11.09□□□□□ -0.63
VPS52-215ENST00000464425 NUPR1O60356 82 aa11.08□□□□□ -0.64
VPS52-215ENST00000464425 XCL1P47992 114 aa11.08□□□□□ -0.64
VPS52-215ENST00000464425 FOXI1Q12951 378 aa11.08□□□□□ -0.64
VPS52-215ENST00000464425 COA6Q5JTJ3 125 aaKnown RBP11.08□□□□□ -0.64
VPS52-215ENST00000464425 FAM19A3Q7Z5A8 133 aa11.08□□□□□ -0.64
VPS52-215ENST00000464425 hDV102S1A0JD36 115 aa11.07□□□□□ -0.64
VPS52-215ENST00000464425 UBE2D1P51668 147 aa11.07□□□□□ -0.64
VPS52-215ENST00000464425 FAM19A2Q8N3H0 131 aa11.07□□□□□ -0.64
VPS52-215ENST00000464425 PMVKQ15126 192 aa11.06□□□□□ -0.64
VPS52-215ENST00000464425 LINC00242Q5T6M2 205 aa11.06□□□□□ -0.64
VPS52-215ENST00000464425 ZC2HC1BQ5TFG8 222 aa11.06□□□□□ -0.64
VPS52-215ENST00000464425 Q8N1X5 172 aa11.06□□□□□ -0.64
VPS52-215ENST00000464425 CST9LQ9H4G1 147 aa11.06□□□□□ -0.64
VPS52-215ENST00000464425 SEC11AP67812 179 aa11.05□□□□□ -0.64
VPS52-215ENST00000464425 IGHV3OR16-9A0A0B4J2B5 98 aa11.04□□□□□ -0.64
VPS52-215ENST00000464425 SMR3BP02814 79 aaPredicted RBP11.04□□□□□ -0.64
VPS52-215ENST00000464425 CFAP161Q6P656 301 aa11.04□□□□□ -0.64
VPS52-215ENST00000464425 C15orf56Q8N910 161 aa11.04□□□□□ -0.64
VPS52-215ENST00000464425 COX7A2LO14548 114 aa11.03□□□□□ -0.64
VPS52-215ENST00000464425 LEPROTL1O95214 131 aa11.03□□□□□ -0.64
VPS52-215ENST00000464425 NDUFA6P56556 154 aa11.03□□□□□ -0.64
VPS52-215ENST00000464425 HIGD2BQ4VC39 106 aa11.03□□□□□ -0.64
VPS52-215ENST00000464425 IFI27L1Q96BM0 104 aa11.03□□□□□ -0.64
VPS52-215ENST00000464425 FAT1Q14517 4588 aa11.02□□□□□ -0.64
VPS52-215ENST00000464425 SLPIP03973 132 aa11.02□□□□□ -0.65
VPS52-215ENST00000464425 Q6ZSA8 131 aa11.02□□□□□ -0.65
VPS52-215ENST00000464425 HSPB8Q9UJY1 196 aa11.02□□□□□ -0.65
VPS52-215ENST00000464425 HERVK_113P63121 156 aa11.01□□□□□ -0.65
VPS52-215ENST00000464425 COX6A2Q02221 97 aa11.01□□□□□ -0.65
VPS52-215ENST00000464425 C9orf163Q8N9P6 203 aa11.01□□□□□ -0.65
VPS52-215ENST00000464425 PCLOQ9Y6V0 5065 aa11.01□□□□□ -0.65
VPS52-215ENST00000464425 A0A087WZ39 114 aa11□□□□□ -0.65
VPS52-215ENST00000464425 TRAV12-1A0A0B4J245 112 aa11□□□□□ -0.65
VPS52-215ENST00000464425 IGHV1-58A0A0C4DH39 117 aa11□□□□□ -0.65
VPS52-215ENST00000464425 TINCRA0A1B0GVN0 87 aa11□□□□□ -0.65
VPS52-215ENST00000464425 MALP21145 153 aa11□□□□□ -0.65
VPS52-215ENST00000464425 CNBPP62633 177 aaKnown RBP11□□□□□ -0.65
VPS52-215ENST00000464425 C5orf38Q86SI9 138 aa11□□□□□ -0.65
VPS52-215ENST00000464425 PACRGQ96M98 296 aaPredicted RBP11□□□□□ -0.65
VPS52-215ENST00000464425 A0A0J9YXV3 536 aa10.99□□□□□ -0.65
VPS52-215ENST00000464425 EPM2AB3EWF7 344 aa10.99□□□□□ -0.65
VPS52-215ENST00000464425 LINC01561Q8N1V8 128 aa10.99□□□□□ -0.65
VPS52-215ENST00000464425 GEMIN7Q9H840 131 aaKnown RBP10.99□□□□□ -0.65
VPS52-215ENST00000464425 GVQW2A0A096LPI5 108 aaPredicted RBP10.98□□□□□ -0.65
VPS52-215ENST00000464425 APOMO95445 188 aa10.98□□□□□ -0.65
VPS52-215ENST00000464425 FABP4P15090 132 aa10.98□□□□□ -0.65
VPS52-215ENST00000464425 ABCA13Q86UQ4 5058 aa10.98□□□□□ -0.65
VPS52-215ENST00000464425 IGLV5-45A0A087WSX0 123 aa10.97□□□□□ -0.65
VPS52-215ENST00000464425 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.97□□□□□ -0.65
VPS52-215ENST00000464425 IGLC3P0DOY3 106 aa10.97□□□□□ -0.65
VPS52-215ENST00000464425 SCXQ7RTU7 201 aa10.97□□□□□ -0.65
VPS52-215ENST00000464425 LINC00526Q96FQ7 95 aa10.97□□□□□ -0.65
VPS52-215ENST00000464425 Q5VSD8 79 aa10.96□□□□□ -0.65
VPS52-215ENST00000464425 SDIM1Q6ZPB5 146 aa10.96□□□□□ -0.65
VPS52-215ENST00000464425 CHAC1Q9BUX1 264 aa10.96□□□□□ -0.65
VPS52-215ENST00000464425 IGLV4-69A0A075B6H9 119 aa10.95□□□□□ -0.66
VPS52-215ENST00000464425 IGHV3-64A0A075B6Q5 118 aa10.95□□□□□ -0.66
VPS52-215ENST00000464425 OR10D4PQ8NGN7 298 aa10.95□□□□□ -0.66
VPS52-215ENST00000464425 CDKN2A-AS1Q9UH64 79 aa10.95□□□□□ -0.66
VPS52-215ENST00000464425 CHTOPQ9Y3Y2 248 aaKnown RBP10.95□□□□□ -0.66
VPS52-215ENST00000464425 S100A6P06703 90 aa10.94□□□□□ -0.66
VPS52-215ENST00000464425 CIRBP-AS1Q8TBR5 109 aa10.94□□□□□ -0.66
VPS52-215ENST00000464425 MAP1LC3CQ9BXW4 147 aa10.94□□□□□ -0.66
VPS52-215ENST00000464425 F8VRH5 84 aa10.93□□□□□ -0.66
VPS52-215ENST00000464425 FAM229AH3BQW9 127 aa10.93□□□□□ -0.66
VPS52-215ENST00000464425 ZNF561-AS1K7EIQ3 104 aa10.93□□□□□ -0.66
VPS52-215ENST00000464425 LINC00469Q8N7U9 141 aa10.93□□□□□ -0.66
VPS52-215ENST00000464425 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.93□□□□□ -0.66
VPS52-215ENST00000464425 PANO1I0J062 215 aa10.92□□□□□ -0.66
VPS52-215ENST00000464425 ODF1Q14990 250 aa10.92□□□□□ -0.66
VPS52-215ENST00000464425 C11orf86A6NJI1 115 aa10.91□□□□□ -0.66
VPS52-215ENST00000464425 F8WDY8 70 aa10.91□□□□□ -0.66
VPS52-215ENST00000464425 H3BRM9 83 aa10.91□□□□□ -0.66
VPS52-215ENST00000464425 ORAOV1Q8WV07 137 aa10.91□□□□□ -0.66
VPS52-215ENST00000464425 MRPL35Q9NZE8 188 aaKnown RBP10.91□□□□□ -0.66
VPS52-215ENST00000464425 H0Y8G0 127 aa10.9□□□□□ -0.66
VPS52-215ENST00000464425 ZNF22P17026 224 aaPredicted RBP10.9□□□□□ -0.66
VPS52-215ENST00000464425 LINC00528Q8N1L1 170 aa10.9□□□□□ -0.66
VPS52-215ENST00000464425 HIST3H2BBQ8N257 126 aa10.9□□□□□ -0.66
VPS52-215ENST00000464425 DPH3Q96FX2 82 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms