RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 RNF183Q96D59 192 aa15.29■□□□□ 0.04
PDLIM2-216ENST00000464275 VSIG2Q96IQ7 327 aa15.29■□□□□ 0.04
PDLIM2-216ENST00000464275 ERG28Q9UKR5 140 aa15.29■□□□□ 0.04
PDLIM2-216ENST00000464275 TCL1BO95988 128 aa15.28■□□□□ 0.04
PDLIM2-216ENST00000464275 TIRAPP58753 221 aa15.28■□□□□ 0.04
PDLIM2-216ENST00000464275 FOXI1Q12951 378 aa15.28■□□□□ 0.04
PDLIM2-216ENST00000464275 SMCPP49901 116 aaPredicted RBP15.27■□□□□ 0.04
PDLIM2-216ENST00000464275 OXLD1Q5BKU9 147 aa15.27■□□□□ 0.04
PDLIM2-216ENST00000464275 GEMIN7Q9H840 131 aaKnown RBP15.27■□□□□ 0.04
PDLIM2-216ENST00000464275 IGHV3-64A0A075B6Q5 118 aa15.27■□□□□ 0.03
PDLIM2-216ENST00000464275 TIMM17BO60830 172 aa15.27■□□□□ 0.03
PDLIM2-216ENST00000464275 SCGB1C2P0DMR2 95 aa15.27■□□□□ 0.03
PDLIM2-216ENST00000464275 IGLV5-45A0A087WSX0 123 aa15.26■□□□□ 0.03
PDLIM2-216ENST00000464275 FAM19A3Q7Z5A8 133 aa15.26■□□□□ 0.03
PDLIM2-216ENST00000464275 TEN1Q86WV5 123 aa15.26■□□□□ 0.03
PDLIM2-216ENST00000464275 Q8NAQ8 132 aa15.26■□□□□ 0.03
PDLIM2-216ENST00000464275 TMEM101Q96IK0 257 aa15.26■□□□□ 0.03
PDLIM2-216ENST00000464275 NDUFA12Q9UI09 145 aa15.26■□□□□ 0.03
PDLIM2-216ENST00000464275 PRO0255Q9UI72 69 aa15.26■□□□□ 0.03
PDLIM2-216ENST00000464275 MTURNQ8N3F0 131 aa15.25■□□□□ 0.03
PDLIM2-216ENST00000464275 LITAFQ99732 161 aa15.25■□□□□ 0.03
PDLIM2-216ENST00000464275 CDC42SE2Q9NRR3 84 aa15.25■□□□□ 0.03
PDLIM2-216ENST00000464275 TRBV6-8A0A0A6YYG3 113 aa15.25■□□□□ 0.03
PDLIM2-216ENST00000464275 ZFAND6Q6FIF0 208 aa15.25■□□□□ 0.03
PDLIM2-216ENST00000464275 PPDPFLQ8WWR9 84 aa15.25■□□□□ 0.03
PDLIM2-216ENST00000464275 DEFB4AO15263 64 aa15.24■□□□□ 0.03
PDLIM2-216ENST00000464275 GYPEP15421 78 aa15.24■□□□□ 0.03
PDLIM2-216ENST00000464275 PRIMA1Q86XR5 153 aa15.24■□□□□ 0.03
PDLIM2-216ENST00000464275 KRTAP10-11P60412 298 aa15.23■□□□□ 0.03
PDLIM2-216ENST00000464275 EGFEM1PQ0D2K5 195 aa15.23■□□□□ 0.03
PDLIM2-216ENST00000464275 IFITM1P13164 125 aa15.22■□□□□ 0.03
PDLIM2-216ENST00000464275 DAD1P61803 113 aa15.22■□□□□ 0.03
PDLIM2-216ENST00000464275 HERVK_113P63121 156 aa15.22■□□□□ 0.03
PDLIM2-216ENST00000464275 MIAQ16674 131 aa15.22■□□□□ 0.03
PDLIM2-216ENST00000464275 SFTA2Q6UW10 78 aa15.22■□□□□ 0.03
PDLIM2-216ENST00000464275 TRAV8-3A0A0A6YYJ7 113 aa15.21■□□□□ 0.03
PDLIM2-216ENST00000464275 TRBV30A0A0K0K1B3 111 aa15.21■□□□□ 0.03
PDLIM2-216ENST00000464275 LINC00242Q5T6M2 205 aa15.21■□□□□ 0.03
PDLIM2-216ENST00000464275 A8MZ25 164 aa15.2■□□□□ 0.02
PDLIM2-216ENST00000464275 CDKN2A-AS1Q9UH64 79 aa15.2■□□□□ 0.02
PDLIM2-216ENST00000464275 PAX4O43316 350 aa15.2■□□□□ 0.02
PDLIM2-216ENST00000464275 EIF4EBP3O60516 100 aaPredicted RBP15.2■□□□□ 0.02
PDLIM2-216ENST00000464275 SPINK8P0C7L1 97 aa15.2■□□□□ 0.02
PDLIM2-216ENST00000464275 GAGE6Q13070 117 aa15.2■□□□□ 0.02
PDLIM2-216ENST00000464275 LINC01600Q96MT4 127 aa15.2■□□□□ 0.02
PDLIM2-216ENST00000464275 TRRAPQ9Y4A5 3859 aa15.19■□□□□ 0.02
PDLIM2-216ENST00000464275 SPART-AS1P0CW21 52 aa15.19■□□□□ 0.02
PDLIM2-216ENST00000464275 COX6A2Q02221 97 aa15.19■□□□□ 0.02
PDLIM2-216ENST00000464275 NDUFA1O15239 70 aa15.18■□□□□ 0.02
PDLIM2-216ENST00000464275 ATXN8Q156A1 80 aa15.18■□□□□ 0.02
PDLIM2-216ENST00000464275 CHCHD5Q9BSY4 110 aa15.18■□□□□ 0.02
PDLIM2-216ENST00000464275 CELA1Q9UNI1 258 aa15.18■□□□□ 0.02
PDLIM2-216ENST00000464275 TRAV13-1A0A0B4J241 112 aa15.17■□□□□ 0.02
PDLIM2-216ENST00000464275 ATP5G1P05496 136 aa15.17■□□□□ 0.02
PDLIM2-216ENST00000464275 Q1RN00 199 aa15.17■□□□□ 0.02
PDLIM2-216ENST00000464275 SLC25A20O43772 301 aa15.16■□□□□ 0.02
PDLIM2-216ENST00000464275 COPS9Q8WXC6 57 aa15.16■□□□□ 0.02
PDLIM2-216ENST00000464275 IGLV5-39A0A0G2JS06 123 aa15.15■□□□□ 0.02
PDLIM2-216ENST00000464275 PRSS2P07478 247 aa15.15■□□□□ 0.02
PDLIM2-216ENST00000464275 CIRBPQ14011 172 aaKnown RBP15.15■□□□□ 0.02
PDLIM2-216ENST00000464275 COX6CP09669 75 aa15.13■□□□□ 0.01
PDLIM2-216ENST00000464275 ADAMTSL4-AS1Q5T5F5 129 aa15.13■□□□□ 0.01
PDLIM2-216ENST00000464275 IGLV4-60A0A075B6I1 120 aa15.12■□□□□ 0.01
PDLIM2-216ENST00000464275 TMEM262E9PQX1 116 aa15.12■□□□□ 0.01
PDLIM2-216ENST00000464275 CARD19Q96LW7 228 aa15.12■□□□□ 0.01
PDLIM2-216ENST00000464275 C9JAW5 83 aa15.11■□□□□ 0.01
PDLIM2-216ENST00000464275 ANKRD29Q8N6D5 301 aa15.11■□□□□ 0.01
PDLIM2-216ENST00000464275 NBEAL2Q6ZNJ1 2754 aa15.11■□□□□ 0.01
PDLIM2-216ENST00000464275 H7C2G1 150 aa15.11■□□□□ 0.01
PDLIM2-216ENST00000464275 LINC01620Q4KN68 170 aa15.11■□□□□ 0.01
PDLIM2-216ENST00000464275 PPDPFQ9H3Y8 114 aa15.11■□□□□ 0.01
PDLIM2-216ENST00000464275 F5H768 121 aa15.1■□□□□ 0.01
PDLIM2-216ENST00000464275 ICOSQ9Y6W8 199 aa15.1■□□□□ 0.01
PDLIM2-216ENST00000464275 TRAV26-1A0A087WT03 109 aa15.09■□□□□ 0.01
PDLIM2-216ENST00000464275 A0A096LPF7 62 aa15.09■□□□□ 0.01
PDLIM2-216ENST00000464275 SMIM1B2RUZ4 78 aa15.09■□□□□ 0.01
PDLIM2-216ENST00000464275 TRIAP1O43715 76 aa15.09■□□□□ 0.01
PDLIM2-216ENST00000464275 CDIP1Q9H305 208 aa15.09■□□□□ 0.01
PDLIM2-216ENST00000464275 CMYA5Q8N3K9 4069 aa15.09■□□□□ 0.01
PDLIM2-216ENST00000464275 FBN1P35555 2871 aaKnown RBP15.08■□□□□ 0
PDLIM2-216ENST00000464275 A0A1B0GUV1 79 aa15.08■□□□□ 0
PDLIM2-216ENST00000464275 TRBV10-2A0A0K0K1G8 114 aa15.07■□□□□ 0
PDLIM2-216ENST00000464275 HERV-K104P63124 156 aa15.06■□□□□ 0
PDLIM2-216ENST00000464275 HTN3P15516 51 aa15.05■□□□□ 0
PDLIM2-216ENST00000464275 MRPL23Q16540 153 aaKnown RBP15.05■□□□□ 0
PDLIM2-216ENST00000464275 RETNQ9HD89 108 aa15.05■□□□□ 0
PDLIM2-216ENST00000464275 RPL13AP40429 203 aaKnown RBP15.05■□□□□ -0
PDLIM2-216ENST00000464275 IGKV3OR2-268A0A0C4DH90 116 aa15.04■□□□□ -0
PDLIM2-216ENST00000464275 H3BT86 120 aa15.04■□□□□ -0
PDLIM2-216ENST00000464275 Q9H8V8 135 aa15.04■□□□□ -0
PDLIM2-216ENST00000464275 STAB1Q9NY15 2570 aa15.04■□□□□ -0
PDLIM2-216ENST00000464275 LINC00959A0A1B0GUT2 108 aa15.02□□□□□ -0.01
PDLIM2-216ENST00000464275 LINC00308Q8TCZ7 52 aa15.02□□□□□ -0.01
PDLIM2-216ENST00000464275 C11orf68Q9H3H3 251 aaKnown RBP15.02□□□□□ -0.01
PDLIM2-216ENST00000464275 ZNF625Q96I27 306 aaPredicted RBP15□□□□□ -0.01
PDLIM2-216ENST00000464275 IGHV3OR16-9A0A0B4J2B5 98 aa15□□□□□ -0.01
PDLIM2-216ENST00000464275 A0A1B0GV72 72 aa15□□□□□ -0.01
PDLIM2-216ENST00000464275 LST1O00453 97 aa15□□□□□ -0.01
PDLIM2-216ENST00000464275 SS18Q15532 418 aa14.98□□□□□ -0.01
PDLIM2-216ENST00000464275 NTN5Q8WTR8 489 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 211.6 ms