RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 CIRBP-AS1Q8TBR5 109 aa5.81□□□□□ -1.48
DDX39B-216ENST00000462421 CAMK2N2Q96S95 79 aa5.81□□□□□ -1.48
DDX39B-216ENST00000462421 SMCO4Q9NRQ5 59 aa5.81□□□□□ -1.48
DDX39B-216ENST00000462421 FAM30AQ9NZY2 134 aa5.81□□□□□ -1.48
DDX39B-216ENST00000462421 CYSLTR1Q9Y271 337 aa5.81□□□□□ -1.48
DDX39B-216ENST00000462421 IGKV2-24A0A0C4DH68 120 aa5.8□□□□□ -1.48
DDX39B-216ENST00000462421 LINC01549A6NIU2 74 aa5.8□□□□□ -1.48
DDX39B-216ENST00000462421 PRSS2P07478 247 aa5.8□□□□□ -1.48
DDX39B-216ENST00000462421 SEC11AP67812 179 aa5.8□□□□□ -1.48
DDX39B-216ENST00000462421 SYCNQ0VAF6 134 aa5.8□□□□□ -1.48
DDX39B-216ENST00000462421 RHEBQ15382 184 aa5.8□□□□□ -1.48
DDX39B-216ENST00000462421 RNASE13Q5GAN3 156 aaKnown RBP5.8□□□□□ -1.48
DDX39B-216ENST00000462421 Q6ZUT4 128 aa5.8□□□□□ -1.48
DDX39B-216ENST00000462421 Q8N8P6 123 aa5.8□□□□□ -1.48
DDX39B-216ENST00000462421 PRSS3P2Q8NHM4 247 aa5.8□□□□□ -1.48
DDX39B-216ENST00000462421 TMEM141Q96I45 108 aa5.8□□□□□ -1.48
DDX39B-216ENST00000462421 IGLV4-69A0A075B6H9 119 aa5.79□□□□□ -1.48
DDX39B-216ENST00000462421 MT-ND6P03923 174 aa5.79□□□□□ -1.48
DDX39B-216ENST00000462421 RPL39P62891 51 aaKnown RBP5.79□□□□□ -1.48
DDX39B-216ENST00000462421 MRPS36P82909 103 aaKnown RBP5.79□□□□□ -1.48
DDX39B-216ENST00000462421 SPAG11BQ08648 103 aa5.79□□□□□ -1.48
DDX39B-216ENST00000462421 KRTAP26-1Q6PEX3 210 aa5.79□□□□□ -1.48
DDX39B-216ENST00000462421 C15orf56Q8N910 161 aa5.79□□□□□ -1.48
DDX39B-216ENST00000462421 OR10D4PQ8NGN7 298 aa5.79□□□□□ -1.48
DDX39B-216ENST00000462421 PACRGQ96M98 296 aaPredicted RBP5.79□□□□□ -1.48
DDX39B-216ENST00000462421 VCX2Q9H322 139 aa5.79□□□□□ -1.48
DDX39B-216ENST00000462421 RPS10P5Q9NQ39 176 aa5.79□□□□□ -1.48
DDX39B-216ENST00000462421 HSPG2P98160 4391 aa5.78□□□□□ -1.48
DDX39B-216ENST00000462421 LOC107984640A0A0U1RRK4 108 aa5.78□□□□□ -1.48
DDX39B-216ENST00000462421 F8WDY8 70 aa5.78□□□□□ -1.48
DDX39B-216ENST00000462421 COX6A2Q02221 97 aa5.78□□□□□ -1.48
DDX39B-216ENST00000462421 RPL18AQ02543 176 aaKnown RBP5.78□□□□□ -1.48
DDX39B-216ENST00000462421 FA2HQ7L5A8 372 aa5.78□□□□□ -1.48
DDX39B-216ENST00000462421 C5orf38Q86SI9 138 aa5.78□□□□□ -1.48
DDX39B-216ENST00000462421 ORAOV1Q8WV07 137 aa5.78□□□□□ -1.48
DDX39B-216ENST00000462421 APOBP04114 4563 aaKnown RBP5.77□□□□□ -1.49
DDX39B-216ENST00000462421 NDUFA1O15239 70 aa5.77□□□□□ -1.49
DDX39B-216ENST00000462421 SNAPINO95295 136 aa5.77□□□□□ -1.49
DDX39B-216ENST00000462421 NPSP0C0P6 89 aa5.77□□□□□ -1.49
DDX39B-216ENST00000462421 FABP9Q0Z7S8 132 aa5.77□□□□□ -1.49
DDX39B-216ENST00000462421 GAGE2BQ13066 116 aa5.77□□□□□ -1.49
DDX39B-216ENST00000462421 C2orf66Q6UXQ4 117 aa5.77□□□□□ -1.49
DDX39B-216ENST00000462421 SDIM1Q6ZPB5 146 aa5.77□□□□□ -1.49
DDX39B-216ENST00000462421 KRTAP9-8Q9BYQ0 159 aa5.77□□□□□ -1.49
DDX39B-216ENST00000462421 KRTAP4-5Q9BYR2 181 aa5.77□□□□□ -1.49
DDX39B-216ENST00000462421 GEMIN7Q9H840 131 aaKnown RBP5.77□□□□□ -1.49
DDX39B-216ENST00000462421 PYGO1Q9Y3Y4 419 aa5.77□□□□□ -1.49
DDX39B-216ENST00000462421 SVBPQ8N300 66 aa5.76□□□□□ -1.49
DDX39B-216ENST00000462421 STPG4Q8N801 248 aa5.76□□□□□ -1.49
DDX39B-216ENST00000462421 SPACA4Q8TDM5 124 aa5.76□□□□□ -1.49
DDX39B-216ENST00000462421 C2orf48Q96LS8 159 aa5.76□□□□□ -1.49
DDX39B-216ENST00000462421 GNB1LQ9BYB4 327 aa5.76□□□□□ -1.49
DDX39B-216ENST00000462421 A0A087WYN8 130 aa5.75□□□□□ -1.49
DDX39B-216ENST00000462421 PRSS47A8MTI9 375 aa5.75□□□□□ -1.49
DDX39B-216ENST00000462421 CKS1BP61024 79 aa5.75□□□□□ -1.49
DDX39B-216ENST00000462421 SCGB3A1Q96QR1 104 aa5.75□□□□□ -1.49
DDX39B-216ENST00000462421 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.75□□□□□ -1.49
DDX39B-216ENST00000462421 APOC3P02656 99 aa5.74□□□□□ -1.49
DDX39B-216ENST00000462421 RAB5BP61020 215 aa5.74□□□□□ -1.49
DDX39B-216ENST00000462421 HERVK_113P63121 156 aa5.74□□□□□ -1.49
DDX39B-216ENST00000462421 KIAA1644Q3SXP7 199 aa5.74□□□□□ -1.49
DDX39B-216ENST00000462421 LINC00526Q96FQ7 95 aa5.74□□□□□ -1.49
DDX39B-216ENST00000462421 ALKBH7Q9BT30 221 aaPredicted RBP5.74□□□□□ -1.49
DDX39B-216ENST00000462421 MRPL18Q9H0U6 180 aaKnown RBP5.74□□□□□ -1.49
DDX39B-216ENST00000462421 TRAPPC1Q9Y5R8 145 aa5.74□□□□□ -1.49
DDX39B-216ENST00000462421 IGLV4-3A0A075B6K6 122 aa5.73□□□□□ -1.49
DDX39B-216ENST00000462421 CHTF8P0CG12 524 aa5.73□□□□□ -1.49
DDX39B-216ENST00000462421 ADCYAP1P18509 176 aa5.73□□□□□ -1.49
DDX39B-216ENST00000462421 IFITM2Q01629 132 aa5.73□□□□□ -1.49
DDX39B-216ENST00000462421 Q6ZRU5 148 aa5.73□□□□□ -1.49
DDX39B-216ENST00000462421 TOMM7Q9P0U1 55 aa5.73□□□□□ -1.49
DDX39B-216ENST00000462421 H3BRM9 83 aa5.72□□□□□ -1.49
DDX39B-216ENST00000462421 RNF151Q2KHN1 245 aa5.72□□□□□ -1.49
DDX39B-216ENST00000462421 C6orf226Q5I0X4 101 aa5.72□□□□□ -1.49
DDX39B-216ENST00000462421 TIMM17AQ99595 171 aa5.72□□□□□ -1.49
DDX39B-216ENST00000462421 OPRPNQ99935 248 aaPredicted RBP5.72□□□□□ -1.49
DDX39B-216ENST00000462421 PLAC8Q9NZF1 115 aa5.72□□□□□ -1.49
DDX39B-216ENST00000462421 CARHSP1Q9Y2V2 147 aaKnown RBP5.72□□□□□ -1.49
DDX39B-216ENST00000462421 A0A087WZ39 114 aa5.71□□□□□ -1.5
DDX39B-216ENST00000462421 A0A096LNI7 61 aa5.71□□□□□ -1.5
DDX39B-216ENST00000462421 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.71□□□□□ -1.5
DDX39B-216ENST00000462421 OXTP01178 125 aa5.71□□□□□ -1.5
DDX39B-216ENST00000462421 SLPIP03973 132 aa5.71□□□□□ -1.5
DDX39B-216ENST00000462421 PTTG1IPP53801 180 aa5.71□□□□□ -1.5
DDX39B-216ENST00000462421 NDUFA6P56556 154 aa5.71□□□□□ -1.5
DDX39B-216ENST00000462421 CIRBPQ14011 172 aaKnown RBP5.71□□□□□ -1.5
DDX39B-216ENST00000462421 ERASQ7Z444 233 aa5.71□□□□□ -1.5
DDX39B-216ENST00000462421 LINC01561Q8N1V8 128 aa5.71□□□□□ -1.5
DDX39B-216ENST00000462421 LINC00469Q8N7U9 141 aa5.71□□□□□ -1.5
DDX39B-216ENST00000462421 TOMM6Q96B49 74 aa5.71□□□□□ -1.5
DDX39B-216ENST00000462421 MRPL35Q9NZE8 188 aaKnown RBP5.71□□□□□ -1.5
DDX39B-216ENST00000462421 IGHV3OR16-9A0A0B4J2B5 98 aa5.7□□□□□ -1.5
DDX39B-216ENST00000462421 TRBV30A0A0K0K1B3 111 aa5.7□□□□□ -1.5
DDX39B-216ENST00000462421 CXCL5P42830 114 aa5.7□□□□□ -1.5
DDX39B-216ENST00000462421 UBE2D1P51668 147 aa5.7□□□□□ -1.5
DDX39B-216ENST00000462421 Q6ZRP5 223 aa5.7□□□□□ -1.5
DDX39B-216ENST00000462421 GAGE2EQ4V326 116 aa5.69□□□□□ -1.5
DDX39B-216ENST00000462421 LINC00242Q5T6M2 205 aa5.69□□□□□ -1.5
DDX39B-216ENST00000462421 REG3GQ6UW15 175 aa5.69□□□□□ -1.5
DDX39B-216ENST00000462421 GAGE2DQ9UEU5 116 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms