RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 IGKV3OR2-268A0A0C4DH90 116 aa8.33□□□□□ -1.08
PDZRN3-203ENST00000462146 FSHBP01225 129 aa8.33□□□□□ -1.08
PDZRN3-203ENST00000462146 RPL36AP83881 106 aaKnown RBP8.33□□□□□ -1.08
PDZRN3-203ENST00000462146 RPL36ALQ969Q0 106 aaKnown RBP8.33□□□□□ -1.08
PDZRN3-203ENST00000462146 SETXQ7Z333 2677 aaKnown RBP8.33□□□□□ -1.08
PDZRN3-203ENST00000462146 C4orf3Q8WVX3 66 aa8.33□□□□□ -1.08
PDZRN3-203ENST00000462146 J3QLI3 93 aa8.32□□□□□ -1.08
PDZRN3-203ENST00000462146 PLA2G2AP14555 144 aa8.32□□□□□ -1.08
PDZRN3-203ENST00000462146 DSCR9P59020 149 aa8.32□□□□□ -1.08
PDZRN3-203ENST00000462146 IGHV4-31P0DP07 118 aa8.32□□□□□ -1.08
PDZRN3-203ENST00000462146 STHQ8IWL8 128 aa8.32□□□□□ -1.08
PDZRN3-203ENST00000462146 LINC00337Q8N6G1 96 aa8.32□□□□□ -1.08
PDZRN3-203ENST00000462146 LRRK2Q5S007 2527 aa8.31□□□□□ -1.08
PDZRN3-203ENST00000462146 A0A1W2PRX2 142 aa8.31□□□□□ -1.08
PDZRN3-203ENST00000462146 C9orf129Q5T035 196 aaKnown RBP8.31□□□□□ -1.08
PDZRN3-203ENST00000462146 TOMM7Q9P0U1 55 aa8.31□□□□□ -1.08
PDZRN3-203ENST00000462146 ABCA12Q86UK0 2595 aa8.31□□□□□ -1.08
PDZRN3-203ENST00000462146 TRACP01848 142 aa8.31□□□□□ -1.08
PDZRN3-203ENST00000462146 MIR7-3HGQ8N6C7 128 aa8.31□□□□□ -1.08
PDZRN3-203ENST00000462146 NOP10Q9NPE3 64 aaKnown RBP8.31□□□□□ -1.08
PDZRN3-203ENST00000462146 CSDC2Q9Y534 153 aaKnown RBP8.31□□□□□ -1.08
PDZRN3-203ENST00000462146 SONP18583 2426 aaKnown RBP8.31□□□□□ -1.08
PDZRN3-203ENST00000462146 IGKV2-28A0A075B6P5 120 aa8.3□□□□□ -1.08
PDZRN3-203ENST00000462146 IGKV2D-28P01615 120 aa8.3□□□□□ -1.08
PDZRN3-203ENST00000462146 J3QKU1 62 aa8.3□□□□□ -1.08
PDZRN3-203ENST00000462146 PTPN13Q12923 2485 aa8.3□□□□□ -1.08
PDZRN3-203ENST00000462146 ACYP1P07311 99 aa8.3□□□□□ -1.08
PDZRN3-203ENST00000462146 GAGE2AQ6NT46 116 aa8.3□□□□□ -1.08
PDZRN3-203ENST00000462146 A0A087WYN8 130 aa8.29□□□□□ -1.08
PDZRN3-203ENST00000462146 UBE2L6O14933 153 aa8.29□□□□□ -1.08
PDZRN3-203ENST00000462146 HERV-K104P63124 156 aa8.29□□□□□ -1.08
PDZRN3-203ENST00000462146 WFDC10AQ9H1F0 79 aa8.29□□□□□ -1.08
PDZRN3-203ENST00000462146 HIST2H2BCQ6DN03 193 aa8.29□□□□□ -1.08
PDZRN3-203ENST00000462146 COPS9Q8WXC6 57 aa8.28□□□□□ -1.08
PDZRN3-203ENST00000462146 SETD2Q9BYW2 2564 aaPredicted RBP8.28□□□□□ -1.08
PDZRN3-203ENST00000462146 TRBV10-1A0A0K0K1A3 114 aa8.28□□□□□ -1.08
PDZRN3-203ENST00000462146 CRPP02741 224 aa8.28□□□□□ -1.08
PDZRN3-203ENST00000462146 KRTAP10-9P60411 292 aa8.28□□□□□ -1.08
PDZRN3-203ENST00000462146 LINC00643Q86TS7 51 aa8.28□□□□□ -1.08
PDZRN3-203ENST00000462146 COX7B2Q8TF08 81 aa8.28□□□□□ -1.08
PDZRN3-203ENST00000462146 TMEM243Q9BU79 118 aa8.28□□□□□ -1.08
PDZRN3-203ENST00000462146 SND1-IT1Q9HBX3 110 aa8.28□□□□□ -1.08
PDZRN3-203ENST00000462146 MALP21145 153 aa8.27□□□□□ -1.09
PDZRN3-203ENST00000462146 NAV2Q8IVL1 2488 aa8.27□□□□□ -1.09
PDZRN3-203ENST00000462146 IGLV4-60A0A075B6I1 120 aa8.27□□□□□ -1.09
PDZRN3-203ENST00000462146 RPL28P46779 137 aaKnown RBP8.27□□□□□ -1.09
PDZRN3-203ENST00000462146 SDIM1Q6ZPB5 146 aa8.27□□□□□ -1.09
PDZRN3-203ENST00000462146 SMIM11BQ8TCY0 68 aa8.27□□□□□ -1.09
PDZRN3-203ENST00000462146 ATP5G1P05496 136 aa8.26□□□□□ -1.09
PDZRN3-203ENST00000462146 FAM110AQ9BQ89 295 aa8.26□□□□□ -1.09
PDZRN3-203ENST00000462146 IMUPQ9GZP8 106 aa8.26□□□□□ -1.09
PDZRN3-203ENST00000462146 PLAC8L1A1L4L8 177 aa8.26□□□□□ -1.09
PDZRN3-203ENST00000462146 GIG44P09565 113 aaPredicted RBP8.26□□□□□ -1.09
PDZRN3-203ENST00000462146 LINC00158P58513 81 aa8.26□□□□□ -1.09
PDZRN3-203ENST00000462146 TRAV13-2A0A0B4J235 113 aa8.25□□□□□ -1.09
PDZRN3-203ENST00000462146 C11orf68Q9H3H3 251 aaKnown RBP8.25□□□□□ -1.09
PDZRN3-203ENST00000462146 C14orf132Q9NPU4 83 aa8.25□□□□□ -1.09
PDZRN3-203ENST00000462146 PFN2P35080 140 aa8.25□□□□□ -1.09
PDZRN3-203ENST00000462146 CCL18P55774 89 aa8.25□□□□□ -1.09
PDZRN3-203ENST00000462146 FAM222AQ5U5X8 452 aa8.25□□□□□ -1.09
PDZRN3-203ENST00000462146 TRGV2A0A075B6R0 118 aa8.24□□□□□ -1.09
PDZRN3-203ENST00000462146 TENM4Q6N022 2769 aa8.24□□□□□ -1.09
PDZRN3-203ENST00000462146 RPL35AP18077 110 aaKnown RBP8.23□□□□□ -1.09
PDZRN3-203ENST00000462146 C5orf38Q86SI9 138 aa8.23□□□□□ -1.09
PDZRN3-203ENST00000462146 HELZ2Q9BYK8 2649 aaKnown RBP8.23□□□□□ -1.09
PDZRN3-203ENST00000462146 SLPIP03973 132 aa8.23□□□□□ -1.09
PDZRN3-203ENST00000462146 C9orf153Q5TBE3 101 aa8.23□□□□□ -1.09
PDZRN3-203ENST00000462146 INAFM2P0DMQ5 153 aa8.23□□□□□ -1.09
PDZRN3-203ENST00000462146 KLK5Q9Y337 293 aaPredicted RBP8.23□□□□□ -1.09
PDZRN3-203ENST00000462146 DNAL4O96015 105 aa8.22□□□□□ -1.09
PDZRN3-203ENST00000462146 C3orf22Q8N5N4 141 aa8.22□□□□□ -1.09
PDZRN3-203ENST00000462146 LECT2O14960 151 aa8.22□□□□□ -1.09
PDZRN3-203ENST00000462146 PF4P02776 101 aa8.22□□□□□ -1.09
PDZRN3-203ENST00000462146 IGHV3OR16-9A0A0B4J2B5 98 aa8.21□□□□□ -1.09
PDZRN3-203ENST00000462146 TRGV4A0A0C4DH28 118 aa8.21□□□□□ -1.1
PDZRN3-203ENST00000462146 CCL24O00175 119 aa8.21□□□□□ -1.1
PDZRN3-203ENST00000462146 NCR3O14931 201 aa8.21□□□□□ -1.1
PDZRN3-203ENST00000462146 IGKV3D-7A0A0C4DH55 119 aa8.2□□□□□ -1.1
PDZRN3-203ENST00000462146 LRRC75A-AS1Q8N1F1 130 aa8.2□□□□□ -1.1
PDZRN3-203ENST00000462146 OR13C6PQ8NH95 151 aa8.2□□□□□ -1.1
PDZRN3-203ENST00000462146 PPDPFQ9H3Y8 114 aa8.2□□□□□ -1.1
PDZRN3-203ENST00000462146 ITPR3Q14573 2671 aa8.2□□□□□ -1.1
PDZRN3-203ENST00000462146 FN1P02751 2386 aaKnown RBP8.19□□□□□ -1.1
PDZRN3-203ENST00000462146 TRAV25A0A0B4J276 109 aa8.19□□□□□ -1.1
PDZRN3-203ENST00000462146 PAX4O43316 350 aa8.19□□□□□ -1.1
PDZRN3-203ENST00000462146 TMEM126AQ9H061 195 aa8.19□□□□□ -1.1
PDZRN3-203ENST00000462146 LINC00846Q9NV44 126 aa8.19□□□□□ -1.1
PDZRN3-203ENST00000462146 TRBV6-8A0A0A6YYG3 113 aa8.19□□□□□ -1.1
PDZRN3-203ENST00000462146 CXCL5P42830 114 aa8.19□□□□□ -1.1
PDZRN3-203ENST00000462146 TRBV6-4A0A1B0GX49 114 aa8.19□□□□□ -1.1
PDZRN3-203ENST00000462146 UQCRQO14949 82 aa8.19□□□□□ -1.1
PDZRN3-203ENST00000462146 C16orf74Q96GX8 76 aa8.19□□□□□ -1.1
PDZRN3-203ENST00000462146 C2orf48Q96LS8 159 aa8.19□□□□□ -1.1
PDZRN3-203ENST00000462146 GCN1Q92616 2671 aaKnown RBP8.19□□□□□ -1.1
PDZRN3-203ENST00000462146 A0A087WVE0 104 aa8.18□□□□□ -1.1
PDZRN3-203ENST00000462146 CLPSL2Q6UWE3 100 aa8.18□□□□□ -1.1
PDZRN3-203ENST00000462146 CYSTM1Q9H1C7 97 aa8.18□□□□□ -1.1
PDZRN3-203ENST00000462146 FHL2Q14192 279 aa8.18□□□□□ -1.1
PDZRN3-203ENST00000462146 CCDC168Q8NDH2 2452 aa8.18□□□□□ -1.1
PDZRN3-203ENST00000462146 A0A087WZ39 114 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms