RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 CBLN2Q8IUK8 224 aa7.01□□□□□ -1.29
UBR4-208ENST00000459947 IGIPA6NJ69 53 aa7.01□□□□□ -1.29
UBR4-208ENST00000459947 C2orf48Q96LS8 159 aa7.01□□□□□ -1.29
UBR4-208ENST00000459947 HYDINQ4G0P3 5121 aa7.01□□□□□ -1.29
UBR4-208ENST00000459947 ZNF561-AS1K7EIQ3 104 aa7.01□□□□□ -1.29
UBR4-208ENST00000459947 PRSS1P07477 247 aa7.01□□□□□ -1.29
UBR4-208ENST00000459947 HERVK_113P63121 156 aa7.01□□□□□ -1.29
UBR4-208ENST00000459947 IGHV3-64A0A075B6Q5 118 aa7.01□□□□□ -1.29
UBR4-208ENST00000459947 LECT2O14960 151 aa7.01□□□□□ -1.29
UBR4-208ENST00000459947 WFDC2Q14508 124 aa7.01□□□□□ -1.29
UBR4-208ENST00000459947 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7□□□□□ -1.29
UBR4-208ENST00000459947 IGLV2-33A0A075B6J2 118 aaPredicted RBP7□□□□□ -1.29
UBR4-208ENST00000459947 C9orf163Q8N9P6 203 aa7□□□□□ -1.29
UBR4-208ENST00000459947 UBE2D1P51668 147 aa6.99□□□□□ -1.29
UBR4-208ENST00000459947 C15orf56Q8N910 161 aa6.99□□□□□ -1.29
UBR4-208ENST00000459947 GEMIN7Q9H840 131 aaKnown RBP6.99□□□□□ -1.29
UBR4-208ENST00000459947 PMVKQ15126 192 aa6.99□□□□□ -1.29
UBR4-208ENST00000459947 BAGE3Q86Y29 109 aa6.98□□□□□ -1.29
UBR4-208ENST00000459947 KMT2AQ03164 3969 aa6.98□□□□□ -1.29
UBR4-208ENST00000459947 LINC00474Q9P2X8 69 aa6.98□□□□□ -1.29
UBR4-208ENST00000459947 A0A087WZ39 114 aa6.97□□□□□ -1.29
UBR4-208ENST00000459947 IGHV3OR16-9A0A0B4J2B5 98 aa6.97□□□□□ -1.29
UBR4-208ENST00000459947 CARD19Q96LW7 228 aa6.97□□□□□ -1.29
UBR4-208ENST00000459947 DNAH2Q9P225 4427 aa6.97□□□□□ -1.29
UBR4-208ENST00000459947 COLCA2A8K830 154 aa6.97□□□□□ -1.29
UBR4-208ENST00000459947 H3BRM9 83 aa6.97□□□□□ -1.29
UBR4-208ENST00000459947 HSBP1O75506 76 aa6.97□□□□□ -1.29
UBR4-208ENST00000459947 RNASE13Q5GAN3 156 aaKnown RBP6.97□□□□□ -1.29
UBR4-208ENST00000459947 PACRGQ96M98 296 aaPredicted RBP6.97□□□□□ -1.29
UBR4-208ENST00000459947 IGLV4-69A0A075B6H9 119 aa6.97□□□□□ -1.29
UBR4-208ENST00000459947 SYCNQ0VAF6 134 aa6.97□□□□□ -1.29
UBR4-208ENST00000459947 TINCRA0A1B0GVN0 87 aa6.96□□□□□ -1.29
UBR4-208ENST00000459947 KRTAP10-1P60331 282 aa6.96□□□□□ -1.29
UBR4-208ENST00000459947 SPAG11BQ08648 103 aa6.96□□□□□ -1.29
UBR4-208ENST00000459947 PDZD11Q5EBL8 140 aa6.96□□□□□ -1.29
UBR4-208ENST00000459947 LINC00242Q5T6M2 205 aa6.96□□□□□ -1.3
UBR4-208ENST00000459947 TRGC2P03986 189 aa6.96□□□□□ -1.3
UBR4-208ENST00000459947 CXCL5P42830 114 aa6.96□□□□□ -1.3
UBR4-208ENST00000459947 LINC00173Q6ZV60 143 aa6.96□□□□□ -1.3
UBR4-208ENST00000459947 ORAOV1Q8WV07 137 aa6.96□□□□□ -1.3
UBR4-208ENST00000459947 FAM104AQ969W3 186 aa6.96□□□□□ -1.3
UBR4-208ENST00000459947 OPRPNQ99935 248 aaPredicted RBP6.96□□□□□ -1.3
UBR4-208ENST00000459947 NDUFA1O15239 70 aa6.95□□□□□ -1.3
UBR4-208ENST00000459947 Q6ZSA8 131 aa6.95□□□□□ -1.3
UBR4-208ENST00000459947 C5orf38Q86SI9 138 aa6.95□□□□□ -1.3
UBR4-208ENST00000459947 TMEM238LA0A1B0GVL6 79 aa6.95□□□□□ -1.3
UBR4-208ENST00000459947 PRSS2P07478 247 aa6.95□□□□□ -1.3
UBR4-208ENST00000459947 SMIM6P0DI80 62 aa6.95□□□□□ -1.3
UBR4-208ENST00000459947 HIGD2BQ4VC39 106 aa6.95□□□□□ -1.3
UBR4-208ENST00000459947 CAMK2N2Q96S95 79 aa6.95□□□□□ -1.3
UBR4-208ENST00000459947 CST9LQ9H4G1 147 aa6.94□□□□□ -1.3
UBR4-208ENST00000459947 FRAS1Q86XX4 4008 aa6.94□□□□□ -1.3
UBR4-208ENST00000459947 LOC107984640A0A0U1RRK4 108 aa6.94□□□□□ -1.3
UBR4-208ENST00000459947 HSPB8Q9UJY1 196 aa6.94□□□□□ -1.3
UBR4-208ENST00000459947 TRAV12-1A0A0B4J245 112 aa6.93□□□□□ -1.3
UBR4-208ENST00000459947 SFTA2Q6UW10 78 aa6.93□□□□□ -1.3
UBR4-208ENST00000459947 MRPL35Q9NZE8 188 aaKnown RBP6.93□□□□□ -1.3
UBR4-208ENST00000459947 DNAH11Q96DT5 4516 aa6.93□□□□□ -1.3
UBR4-208ENST00000459947 IGLV5-45A0A087WSX0 123 aa6.93□□□□□ -1.3
UBR4-208ENST00000459947 PRO1933Q9H354 126 aa6.93□□□□□ -1.3
UBR4-208ENST00000459947 BIRC6Q9NR09 4857 aa6.93□□□□□ -1.3
UBR4-208ENST00000459947 IGLC3P0DOY3 106 aa6.93□□□□□ -1.3
UBR4-208ENST00000459947 TRBV30A0A0K0K1B3 111 aa6.92□□□□□ -1.3
UBR4-208ENST00000459947 Q8IZM0 81 aa6.92□□□□□ -1.3
UBR4-208ENST00000459947 URB1-AS1Q96HZ7 61 aa6.92□□□□□ -1.3
UBR4-208ENST00000459947 SNRPEP62304 92 aaKnown RBP6.92□□□□□ -1.3
UBR4-208ENST00000459947 IFI27L1Q96BM0 104 aa6.92□□□□□ -1.3
UBR4-208ENST00000459947 ANKRD39Q53RE8 183 aa6.91□□□□□ -1.3
UBR4-208ENST00000459947 SDIM1Q6ZPB5 146 aa6.91□□□□□ -1.3
UBR4-208ENST00000459947 CHAC1Q9BUX1 264 aa6.91□□□□□ -1.3
UBR4-208ENST00000459947 CIRBPQ14011 172 aaKnown RBP6.91□□□□□ -1.3
UBR4-208ENST00000459947 A0A096LNJ9 63 aa6.9□□□□□ -1.3
UBR4-208ENST00000459947 FAM229AH3BQW9 127 aa6.9□□□□□ -1.3
UBR4-208ENST00000459947 NDUFA6P56556 154 aa6.9□□□□□ -1.3
UBR4-208ENST00000459947 Q8N1X5 172 aa6.9□□□□□ -1.3
UBR4-208ENST00000459947 A0A0J9YXV3 536 aa6.9□□□□□ -1.3
UBR4-208ENST00000459947 LEPROTL1O95214 131 aa6.9□□□□□ -1.31
UBR4-208ENST00000459947 PTTG1IPP53801 180 aa6.9□□□□□ -1.31
UBR4-208ENST00000459947 CKS1BP61024 79 aa6.9□□□□□ -1.31
UBR4-208ENST00000459947 TLX1NBP0CAT3 122 aa6.89□□□□□ -1.31
UBR4-208ENST00000459947 CHTOPQ9Y3Y2 248 aaKnown RBP6.89□□□□□ -1.31
UBR4-208ENST00000459947 DYNC1H1Q14204 4646 aaKnown RBP6.89□□□□□ -1.31
UBR4-208ENST00000459947 ODF1Q14990 250 aa6.89□□□□□ -1.31
UBR4-208ENST00000459947 C6orf226Q5I0X4 101 aa6.89□□□□□ -1.31
UBR4-208ENST00000459947 FAT2Q9NYQ8 4349 aa6.89□□□□□ -1.31
UBR4-208ENST00000459947 SERF1AO75920 110 aa6.89□□□□□ -1.31
UBR4-208ENST00000459947 PLA2G1BP04054 148 aaKnown RBP6.89□□□□□ -1.31
UBR4-208ENST00000459947 C20orf202A1L168 122 aa6.88□□□□□ -1.31
UBR4-208ENST00000459947 COX6A2Q02221 97 aa6.88□□□□□ -1.31
UBR4-208ENST00000459947 CDKN2A-AS1Q9UH64 79 aa6.88□□□□□ -1.31
UBR4-208ENST00000459947 XGP55808 180 aa6.88□□□□□ -1.31
UBR4-208ENST00000459947 Q6ZRU5 148 aa6.88□□□□□ -1.31
UBR4-208ENST00000459947 F8VRH5 84 aa6.87□□□□□ -1.31
UBR4-208ENST00000459947 SLPIP03973 132 aa6.87□□□□□ -1.31
UBR4-208ENST00000459947 FUSP35637 526 aaKnown RBP eCLIP6.87□□□□□ -1.31
UBR4-208ENST00000459947 COX7B2Q8TF08 81 aa6.87□□□□□ -1.31
UBR4-208ENST00000459947 DPH3Q96FX2 82 aa6.87□□□□□ -1.31
UBR4-208ENST00000459947 EPM2AB3EWF7 344 aa6.87□□□□□ -1.31
UBR4-208ENST00000459947 SPACA4Q8TDM5 124 aa6.87□□□□□ -1.31
UBR4-208ENST00000459947 KIAA0087Q14695 138 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms