RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 KIR2DL5BQ8NHK3 375 aa7.27□□□□□ -1.25
UFD1-205ENST00000459854 CCL24O00175 119 aa7.27□□□□□ -1.25
UFD1-205ENST00000459854 DHRS4-AS1Q9P1J3 65 aa7.27□□□□□ -1.25
UFD1-205ENST00000459854 PRRC2AP48634 2157 aaKnown RBP7.26□□□□□ -1.25
UFD1-205ENST00000459854 CRIP1P50238 77 aa7.26□□□□□ -1.25
UFD1-205ENST00000459854 A0A096LPF7 62 aa7.26□□□□□ -1.25
UFD1-205ENST00000459854 CRYGAP11844 174 aa7.26□□□□□ -1.25
UFD1-205ENST00000459854 E7EUB6 86 aa7.26□□□□□ -1.25
UFD1-205ENST00000459854 LY6G6DO95868 133 aa7.26□□□□□ -1.25
UFD1-205ENST00000459854 C9orf66Q5T8R8 295 aa7.26□□□□□ -1.25
UFD1-205ENST00000459854 CRIP3Q6Q6R5 217 aa7.26□□□□□ -1.25
UFD1-205ENST00000459854 PRYO14603 147 aa7.25□□□□□ -1.25
UFD1-205ENST00000459854 Q8N9L7 120 aa7.25□□□□□ -1.25
UFD1-205ENST00000459854 LINC00467Q9BRT7 94 aa7.25□□□□□ -1.25
UFD1-205ENST00000459854 IGHV4-38-2P0DP08 117 aa7.25□□□□□ -1.25
UFD1-205ENST00000459854 RPL28P46779 137 aaKnown RBP7.25□□□□□ -1.25
UFD1-205ENST00000459854 POLR2KP53803 58 aaKnown RBP7.25□□□□□ -1.25
UFD1-205ENST00000459854 YLPM1P49750 1951 aaKnown RBP7.25□□□□□ -1.25
UFD1-205ENST00000459854 CSPG4Q6UVK1 2322 aa7.25□□□□□ -1.25
UFD1-205ENST00000459854 HELZ2Q9BYK8 2649 aaKnown RBP7.25□□□□□ -1.25
UFD1-205ENST00000459854 IGLV10-54A0A075B6I4 117 aa7.25□□□□□ -1.25
UFD1-205ENST00000459854 TNFRSF13BO14836 293 aaPredicted RBP7.25□□□□□ -1.25
UFD1-205ENST00000459854 DEFB112Q30KQ8 113 aa7.25□□□□□ -1.25
UFD1-205ENST00000459854 FLNBO75369 2602 aaKnown RBP7.24□□□□□ -1.25
UFD1-205ENST00000459854 HECTD1Q9ULT8 2610 aa7.24□□□□□ -1.25
UFD1-205ENST00000459854 C14orf177Q52M58 125 aa7.24□□□□□ -1.25
UFD1-205ENST00000459854 CCL18P55774 89 aa7.24□□□□□ -1.25
UFD1-205ENST00000459854 Q8N7P7 452 aa7.24□□□□□ -1.25
UFD1-205ENST00000459854 RETNQ9HD89 108 aa7.24□□□□□ -1.25
UFD1-205ENST00000459854 EBI3Q14213 229 aa7.23□□□□□ -1.25
UFD1-205ENST00000459854 MRGPRG-AS1Q2M3A8 158 aa7.23□□□□□ -1.25
UFD1-205ENST00000459854 C6orf99Q4VX62 202 aa7.23□□□□□ -1.25
UFD1-205ENST00000459854 SLPIP03973 132 aa7.23□□□□□ -1.25
UFD1-205ENST00000459854 VPREB1P12018 145 aa7.23□□□□□ -1.25
UFD1-205ENST00000459854 APRG1Q8IVJ8 170 aa7.23□□□□□ -1.25
UFD1-205ENST00000459854 C4orf3Q8WVX3 66 aa7.23□□□□□ -1.25
UFD1-205ENST00000459854 TRBV6-4A0A1B0GX49 114 aa7.23□□□□□ -1.25
UFD1-205ENST00000459854 TSHBP01222 138 aa7.23□□□□□ -1.25
UFD1-205ENST00000459854 CEMP1Q6PRD7 247 aaPredicted RBP7.23□□□□□ -1.25
UFD1-205ENST00000459854 Q6ZPA2 131 aa7.22□□□□□ -1.25
UFD1-205ENST00000459854 SMIM11BQ8TCY0 68 aa7.22□□□□□ -1.25
UFD1-205ENST00000459854 CDIP1Q9H305 208 aa7.22□□□□□ -1.25
UFD1-205ENST00000459854 ABCA12Q86UK0 2595 aa7.22□□□□□ -1.25
UFD1-205ENST00000459854 NACAE9PAV3 2078 aa7.22□□□□□ -1.25
UFD1-205ENST00000459854 WFDC10AQ9H1F0 79 aa7.22□□□□□ -1.25
UFD1-205ENST00000459854 INAFM1C9JVW0 142 aa7.22□□□□□ -1.25
UFD1-205ENST00000459854 NTM-AS1Q6ZSK4 140 aa7.22□□□□□ -1.25
UFD1-205ENST00000459854 SCXQ7RTU7 201 aa7.22□□□□□ -1.25
UFD1-205ENST00000459854 URB1-AS1Q96HZ7 61 aa7.22□□□□□ -1.25
UFD1-205ENST00000459854 IGIPA6NJ69 53 aa7.21□□□□□ -1.25
UFD1-205ENST00000459854 ODF3BA8MYP8 253 aa7.21□□□□□ -1.25
UFD1-205ENST00000459854 M0R378 163 aa7.21□□□□□ -1.25
UFD1-205ENST00000459854 REG3AQ06141 175 aa7.21□□□□□ -1.26
UFD1-205ENST00000459854 CCDC140Q96MF4 163 aa7.21□□□□□ -1.26
UFD1-205ENST00000459854 K7EQG2 157 aa7.21□□□□□ -1.26
UFD1-205ENST00000459854 COX8CQ7Z4L0 72 aa7.21□□□□□ -1.26
UFD1-205ENST00000459854 ABCA1O95477 2261 aa7.21□□□□□ -1.26
UFD1-205ENST00000459854 SLURP1P55000 103 aa7.21□□□□□ -1.26
UFD1-205ENST00000459854 Q6ZS46 218 aa7.21□□□□□ -1.26
UFD1-205ENST00000459854 DMDP11532 3685 aa7.21□□□□□ -1.26
UFD1-205ENST00000459854 IGF1P05019 195 aa7.2□□□□□ -1.26
UFD1-205ENST00000459854 KLK5Q9Y337 293 aaPredicted RBP7.2□□□□□ -1.26
UFD1-205ENST00000459854 FREM2Q5SZK8 3169 aa7.2□□□□□ -1.26
UFD1-205ENST00000459854 IGHV4-59P01825 116 aa7.2□□□□□ -1.26
UFD1-205ENST00000459854 CHCHD10Q8WYQ3 142 aaPredicted RBP7.2□□□□□ -1.26
UFD1-205ENST00000459854 PPDPFQ9H3Y8 114 aa7.2□□□□□ -1.26
UFD1-205ENST00000459854 SHISA2Q6UWI4 295 aa7.2□□□□□ -1.26
UFD1-205ENST00000459854 LIMD2Q9BT23 127 aa7.2□□□□□ -1.26
UFD1-205ENST00000459854 UBE2D4Q9Y2X8 147 aa7.2□□□□□ -1.26
UFD1-205ENST00000459854 ZFAND3Q9H8U3 227 aa7.2□□□□□ -1.26
UFD1-205ENST00000459854 ANKRD17O75179 2603 aaKnown RBP7.19□□□□□ -1.26
UFD1-205ENST00000459854 DEFB121Q5J5C9 76 aa7.19□□□□□ -1.26
UFD1-205ENST00000459854 Q6ZQY7 126 aa7.19□□□□□ -1.26
UFD1-205ENST00000459854 ESRGQ1W209 222 aa7.19□□□□□ -1.26
UFD1-205ENST00000459854 C4orf48Q5BLP8 95 aa7.19□□□□□ -1.26
UFD1-205ENST00000459854 C9orf85Q96MD7 179 aa7.19□□□□□ -1.26
UFD1-205ENST00000459854 MAP6D1Q9H9H5 199 aa7.19□□□□□ -1.26
UFD1-205ENST00000459854 TRBV6-8A0A0A6YYG3 113 aa7.19□□□□□ -1.26
UFD1-205ENST00000459854 TRBV7-6A0A0J9YX20 115 aa7.19□□□□□ -1.26
UFD1-205ENST00000459854 KLK12Q9UKR0 248 aa7.19□□□□□ -1.26
UFD1-205ENST00000459854 POLQO75417 2590 aa7.19□□□□□ -1.26
UFD1-205ENST00000459854 A6NDX4 124 aa7.18□□□□□ -1.26
UFD1-205ENST00000459854 Q8IZM0 81 aa7.18□□□□□ -1.26
UFD1-205ENST00000459854 CD164L2Q6UWJ8 174 aa7.18□□□□□ -1.26
UFD1-205ENST00000459854 NAV3Q8IVL0 2385 aa7.18□□□□□ -1.26
UFD1-205ENST00000459854 CXCL6P80162 114 aa7.18□□□□□ -1.26
UFD1-205ENST00000459854 UNQ9165/PRO28630Q6UXU0 137 aa7.18□□□□□ -1.26
UFD1-205ENST00000459854 Q6YL49 198 aa7.17□□□□□ -1.26
UFD1-205ENST00000459854 WFDC10BQ8IUB3 73 aa7.17□□□□□ -1.26
UFD1-205ENST00000459854 hDV103S1A0JD37 113 aa7.17□□□□□ -1.26
UFD1-205ENST00000459854 KLLNB2CW77 178 aa7.17□□□□□ -1.26
UFD1-205ENST00000459854 SMAD5-AS1Q9Y6J3 95 aa7.17□□□□□ -1.26
UFD1-205ENST00000459854 Q8N814 137 aa7.16□□□□□ -1.26
UFD1-205ENST00000459854 SMR3AQ99954 134 aa7.16□□□□□ -1.26
UFD1-205ENST00000459854 TMEM254Q8TBM7 123 aa7.16□□□□□ -1.26
UFD1-205ENST00000459854 DNAJC9-AS1A6NH13 148 aa7.16□□□□□ -1.26
UFD1-205ENST00000459854 LINC00269Q8N2A0 174 aa7.16□□□□□ -1.26
UFD1-205ENST00000459854 KMT2BQ9UMN6 2715 aaPredicted RBP7.16□□□□□ -1.26
UFD1-205ENST00000459854 RAI1Q7Z5J4 1906 aaPredicted RBP7.16□□□□□ -1.26
UFD1-205ENST00000459854 RNASE3P12724 160 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms